RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 NECAB1Q8N987 351 aa20.87■□□□□ 0.93
PTCHD3-202ENST00000622555 CABP5Q9NP86 173 aa20.87■□□□□ 0.93
PTCHD3-202ENST00000622555 STX8Q9UNK0 236 aa20.87■□□□□ 0.93
PTCHD3-202ENST00000622555 IGKV6D-41A0A0C4DH26 115 aa20.87■□□□□ 0.93
PTCHD3-202ENST00000622555 POTEIP0CG38 1075 aa20.87■□□□□ 0.93
PTCHD3-202ENST00000622555 POTEJP0CG39 1038 aa20.87■□□□□ 0.93
PTCHD3-202ENST00000622555 DLK2Q6UY11 383 aa20.87■□□□□ 0.93
PTCHD3-202ENST00000622555 TMEM179Q6ZVK1 233 aa20.87■□□□□ 0.93
PTCHD3-202ENST00000622555 RAB11FIP4Q86YS3 637 aa20.87■□□□□ 0.93
PTCHD3-202ENST00000622555 SSC5DA1L4H1 1573 aa20.86■□□□□ 0.93
PTCHD3-202ENST00000622555 GH2P01242 217 aa20.86■□□□□ 0.93
PTCHD3-202ENST00000622555 CLEC10AQ8IUN9 316 aa20.86■□□□□ 0.93
PTCHD3-202ENST00000622555 CCDC83Q8IWF9 413 aa20.86■□□□□ 0.93
PTCHD3-202ENST00000622555 ZNF654Q8IZM8 581 aa20.86■□□□□ 0.93
PTCHD3-202ENST00000622555 ANKS1AQ92625 1134 aa20.86■□□□□ 0.93
PTCHD3-202ENST00000622555 MYL10Q9BUA6 226 aa20.86■□□□□ 0.93
PTCHD3-202ENST00000622555 ZNF341Q9BYN7 854 aa20.86■□□□□ 0.93
PTCHD3-202ENST00000622555 GLIS2Q9BZE0 524 aaPredicted RBP20.86■□□□□ 0.93
PTCHD3-202ENST00000622555 KAT14Q9H8E8 782 aa20.86■□□□□ 0.93
PTCHD3-202ENST00000622555 FOXD4L1Q9NU39 408 aa20.86■□□□□ 0.93
PTCHD3-202ENST00000622555 MTMR4Q9NYA4 1195 aa20.86■□□□□ 0.93
PTCHD3-202ENST00000622555 ZBTB43O43298 467 aa20.85■□□□□ 0.93
PTCHD3-202ENST00000622555 PFKFB2O60825 505 aa20.85■□□□□ 0.93
PTCHD3-202ENST00000622555 CCT2P78371 535 aaKnown RBP20.85■□□□□ 0.93
PTCHD3-202ENST00000622555 JAG1P78504 1218 aa20.85■□□□□ 0.93
PTCHD3-202ENST00000622555 CUL4AQ13619 759 aa20.85■□□□□ 0.93
PTCHD3-202ENST00000622555 SEPT2Q15019 361 aa20.85■□□□□ 0.93
PTCHD3-202ENST00000622555 CDC37L1Q7L3B6 337 aa20.85■□□□□ 0.93
PTCHD3-202ENST00000622555 CATIPQ7Z7H3 387 aa20.85■□□□□ 0.93
PTCHD3-202ENST00000622555 MICU3Q86XE3 530 aa20.85■□□□□ 0.93
PTCHD3-202ENST00000622555 PHF20L1A8MW92 1017 aa20.84■□□□□ 0.93
PTCHD3-202ENST00000622555 CAP2P40123 477 aa20.84■□□□□ 0.93
PTCHD3-202ENST00000622555 RAB3GAP1Q15042 981 aa20.84■□□□□ 0.93
PTCHD3-202ENST00000622555 PPP4R3BQ5MIZ7 849 aa20.84■□□□□ 0.93
PTCHD3-202ENST00000622555 GTF3C6Q969F1 213 aa20.84■□□□□ 0.93
PTCHD3-202ENST00000622555 KANSL2Q9H9L4 492 aa20.84■□□□□ 0.93
PTCHD3-202ENST00000622555 HPS5Q9UPZ3 1129 aa20.84■□□□□ 0.93
PTCHD3-202ENST00000622555 TTLL1O95922 423 aa20.84■□□□□ 0.93
PTCHD3-202ENST00000622555 RXRAP19793 462 aa20.84■□□□□ 0.93
PTCHD3-202ENST00000622555 GUCY1A2P33402 732 aa20.84■□□□□ 0.93
PTCHD3-202ENST00000622555 METAP2P50579 478 aaKnown RBP eCLIP20.84■□□□□ 0.93
PTCHD3-202ENST00000622555 ST3GAL1Q11201 340 aa20.84■□□□□ 0.93
PTCHD3-202ENST00000622555 SCRN1Q12765 414 aa20.84■□□□□ 0.93
PTCHD3-202ENST00000622555 NUP133Q8WUM0 1156 aa20.84■□□□□ 0.93
PTCHD3-202ENST00000622555 CDCA5Q96FF9 252 aa20.84■□□□□ 0.93
PTCHD3-202ENST00000622555 TMEM47Q9BQJ4 181 aa20.84■□□□□ 0.93
PTCHD3-202ENST00000622555 ZBTB21Q9ULJ3 1066 aa20.84■□□□□ 0.93
PTCHD3-202ENST00000622555 DOCK1Q14185 1865 aa20.83■□□□□ 0.93
PTCHD3-202ENST00000622555 GOLGA8AA7E2F4 631 aa20.83■□□□□ 0.92
PTCHD3-202ENST00000622555 TOP1P11387 765 aaKnown RBP20.83■□□□□ 0.92
PTCHD3-202ENST00000622555 NOVP48745 357 aa20.83■□□□□ 0.92
PTCHD3-202ENST00000622555 ATP2B2Q01814 1243 aa20.83■□□□□ 0.92
PTCHD3-202ENST00000622555 ICA1Q05084 483 aa20.83■□□□□ 0.92
PTCHD3-202ENST00000622555 MAP1SQ66K74 1059 aaPredicted RBP20.83■□□□□ 0.92
PTCHD3-202ENST00000622555 LDHDQ86WU2 507 aa20.83■□□□□ 0.92
PTCHD3-202ENST00000622555 CCDC144CPQ8IYA2 1237 aa20.83■□□□□ 0.92
PTCHD3-202ENST00000622555 PNMA1Q8ND90 353 aa20.83■□□□□ 0.92
PTCHD3-202ENST00000622555 NCOA5Q9HCD5 579 aaKnown RBP20.83■□□□□ 0.92
PTCHD3-202ENST00000622555 CLIP2Q9UDT6 1046 aa20.83■□□□□ 0.92
PTCHD3-202ENST00000622555 FZD1Q9UP38 647 aa20.83■□□□□ 0.92
PTCHD3-202ENST00000622555 DDAH1O94760 285 aa20.82■□□□□ 0.92
PTCHD3-202ENST00000622555 NF2P35240 595 aa20.82■□□□□ 0.92
PTCHD3-202ENST00000622555 PRKG1Q13976 671 aa20.82■□□□□ 0.92
PTCHD3-202ENST00000622555 CTNND1O60716 968 aaKnown RBP20.81■□□□□ 0.92
PTCHD3-202ENST00000622555 RCAN1P53805 252 aa20.81■□□□□ 0.92
PTCHD3-202ENST00000622555 INTS4Q96HW7 963 aaKnown RBP20.81■□□□□ 0.92
PTCHD3-202ENST00000622555 WRNIP1Q96S55 665 aa20.81■□□□□ 0.92
PTCHD3-202ENST00000622555 ZNF112Q9UJU3 913 aa20.81■□□□□ 0.92
PTCHD3-202ENST00000622555 ASNSP08243 561 aa20.81■□□□□ 0.92
PTCHD3-202ENST00000622555 CALM1P0DP23 149 aa20.81■□□□□ 0.92
PTCHD3-202ENST00000622555 CALM2P0DP24 149 aa20.81■□□□□ 0.92
PTCHD3-202ENST00000622555 CALM3P0DP25 149 aa20.81■□□□□ 0.92
PTCHD3-202ENST00000622555 EEF2P13639 858 aaKnown RBP20.81■□□□□ 0.92
PTCHD3-202ENST00000622555 INPP5BP32019 993 aa20.81■□□□□ 0.92
PTCHD3-202ENST00000622555 LRRC47Q8N1G4 583 aaKnown RBP20.81■□□□□ 0.92
PTCHD3-202ENST00000622555 NYAP2Q9P242 653 aa20.81■□□□□ 0.92
PTCHD3-202ENST00000622555 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.81■□□□□ 0.92
PTCHD3-202ENST00000622555 TROAPQ12815 778 aa20.8■□□□□ 0.92
PTCHD3-202ENST00000622555 CHMP4CQ96CF2 233 aa20.8■□□□□ 0.92
PTCHD3-202ENST00000622555 KLRG1Q96E93 195 aa20.8■□□□□ 0.92
PTCHD3-202ENST00000622555 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.8■□□□□ 0.92
PTCHD3-202ENST00000622555 MTMR7Q9Y216 660 aa20.8■□□□□ 0.92
PTCHD3-202ENST00000622555 NID2Q14112 1375 aa20.79■□□□□ 0.92
PTCHD3-202ENST00000622555 DHX16O60231 1041 aaKnown RBP20.79■□□□□ 0.92
PTCHD3-202ENST00000622555 PPP1R12BO60237 982 aaPredicted RBP20.79■□□□□ 0.92
PTCHD3-202ENST00000622555 RTN1Q16799 776 aa20.79■□□□□ 0.92
PTCHD3-202ENST00000622555 FANCBQ8NB91 859 aa20.79■□□□□ 0.92
PTCHD3-202ENST00000622555 GINM1Q9NU53 330 aa20.79■□□□□ 0.92
PTCHD3-202ENST00000622555 OTOFQ9HC10 1997 aa20.79■□□□□ 0.92
PTCHD3-202ENST00000622555 CPLX1O14810 134 aa20.78■□□□□ 0.92
PTCHD3-202ENST00000622555 USP2O75604 605 aaPredicted RBP20.78■□□□□ 0.92
PTCHD3-202ENST00000622555 CDC27P30260 824 aa20.78■□□□□ 0.92
PTCHD3-202ENST00000622555 SIAH1Q8IUQ4 282 aa20.78■□□□□ 0.92
PTCHD3-202ENST00000622555 SCYL3Q8IZE3 742 aa20.78■□□□□ 0.92
PTCHD3-202ENST00000622555 CTCFLQ8NI51 663 aaPredicted RBP20.78■□□□□ 0.92
PTCHD3-202ENST00000622555 ZKSCAN4Q969J2 545 aaPredicted RBP20.78■□□□□ 0.92
PTCHD3-202ENST00000622555 ARHGEF10LQ9HCE6 1279 aa20.78■□□□□ 0.92
PTCHD3-202ENST00000622555 SMC3Q9UQE7 1217 aa20.78■□□□□ 0.92
PTCHD3-202ENST00000622555 CCDC196A0A1B0GTZ2 297 aa20.77■□□□□ 0.92
PTCHD3-202ENST00000622555 TRAF5O00463 557 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms