RNA–Protein interactions for RNA: ENST00000622233.1

RAB28P4-201, Transcript of RAB28, member RAS oncogene family pseudogene 4, humanhuman

BASIC

Gene RAB28P4, Length 665 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P4-201ENST00000622233 A0A0A0MRY4 1105 aa9.42□□□□□ -0.9
RAB28P4-201ENST00000622233 HS2ST1Q7LGA3 356 aa9.42□□□□□ -0.9
RAB28P4-201ENST00000622233 ERMP1Q7Z2K6 904 aa9.42□□□□□ -0.9
RAB28P4-201ENST00000622233 CEP44Q9C0F1 390 aa9.42□□□□□ -0.9
RAB28P4-201ENST00000622233 KBTBD4Q9NVX7 518 aa9.42□□□□□ -0.9
RAB28P4-201ENST00000622233 TLR6Q9Y2C9 796 aa9.42□□□□□ -0.9
RAB28P4-201ENST00000622233 LMO7Q8WWI1 1683 aa9.42□□□□□ -0.9
RAB28P4-201ENST00000622233 USP19O94966 1318 aa9.41□□□□□ -0.9
RAB28P4-201ENST00000622233 AFF2P51816 1311 aa9.41□□□□□ -0.9
RAB28P4-201ENST00000622233 ADAM11O75078 769 aa9.41□□□□□ -0.9
RAB28P4-201ENST00000622233 CTSBP07858 339 aa9.41□□□□□ -0.9
RAB28P4-201ENST00000622233 NLRP12P59046 1061 aa9.41□□□□□ -0.9
RAB28P4-201ENST00000622233 RACK1P63244 317 aaKnown RBP9.41□□□□□ -0.9
RAB28P4-201ENST00000622233 C19orf57Q0VDD7 668 aa9.41□□□□□ -0.9
RAB28P4-201ENST00000622233 FOXD4L6Q3SYB3 417 aaPredicted RBP9.41□□□□□ -0.9
RAB28P4-201ENST00000622233 MEX3CQ5U5Q3 659 aaKnown RBP9.41□□□□□ -0.9
RAB28P4-201ENST00000622233 PCNX4Q63HM2 1172 aa9.41□□□□□ -0.9
RAB28P4-201ENST00000622233 FAM117BQ6P1L5 589 aa9.41□□□□□ -0.9
RAB28P4-201ENST00000622233 FOXD4L3Q6VB84 417 aaPredicted RBP9.41□□□□□ -0.9
RAB28P4-201ENST00000622233 MPRIPQ6WCQ1 1025 aa9.41□□□□□ -0.9
RAB28P4-201ENST00000622233 SULF2Q8IWU5 870 aa9.41□□□□□ -0.9
RAB28P4-201ENST00000622233 GRIN3AQ8TCU5 1115 aa9.41□□□□□ -0.9
RAB28P4-201ENST00000622233 NOC4LQ9BVI4 516 aaKnown RBP9.41□□□□□ -0.9
RAB28P4-201ENST00000622233 ZC3H12CQ9C0D7 883 aaKnown RBP9.41□□□□□ -0.9
RAB28P4-201ENST00000622233 KIF20BQ96Q89 1820 aa9.4□□□□□ -0.9
RAB28P4-201ENST00000622233 MINDY4BA8MYZ0 360 aa9.4□□□□□ -0.9
RAB28P4-201ENST00000622233 GNB5O14775 395 aa9.4□□□□□ -0.9
RAB28P4-201ENST00000622233 BMP6P22004 513 aa9.4□□□□□ -0.9
RAB28P4-201ENST00000622233 ERCC5P28715 1186 aaPredicted RBP9.4□□□□□ -0.9
RAB28P4-201ENST00000622233 LIG3P49916 1009 aa9.4□□□□□ -0.9
RAB28P4-201ENST00000622233 TTBK2Q6IQ55 1244 aa9.4□□□□□ -0.9
RAB28P4-201ENST00000622233 MKL2Q9ULH7 1088 aa9.4□□□□□ -0.9
RAB28P4-201ENST00000622233 BCL9LQ86UU0 1499 aa9.4□□□□□ -0.91
RAB28P4-201ENST00000622233 COL18A1P39060 1754 aa9.4□□□□□ -0.91
RAB28P4-201ENST00000622233 ATRNO75882 1429 aa9.39□□□□□ -0.91
RAB28P4-201ENST00000622233 A0A1W2PP64 1363 aa9.39□□□□□ -0.91
RAB28P4-201ENST00000622233 GLI3P10071 1580 aa9.39□□□□□ -0.91
RAB28P4-201ENST00000622233 INSM1Q01101 510 aaPredicted RBP9.39□□□□□ -0.91
RAB28P4-201ENST00000622233 PPP2R3AQ06190 1150 aa9.39□□□□□ -0.91
RAB28P4-201ENST00000622233 ZNF772Q68DY9 489 aaPredicted RBP9.39□□□□□ -0.91
RAB28P4-201ENST00000622233 FMR1NBQ8N0W7 255 aaPredicted RBP9.39□□□□□ -0.91
RAB28P4-201ENST00000622233 C8orf37Q96NL8 207 aa9.39□□□□□ -0.91
RAB28P4-201ENST00000622233 NRSN2Q9GZP1 204 aa9.39□□□□□ -0.91
RAB28P4-201ENST00000622233 SRA1Q9HD15 236 aaKnown RBP9.39□□□□□ -0.91
RAB28P4-201ENST00000622233 OSGEPQ9NPF4 335 aa9.39□□□□□ -0.91
RAB28P4-201ENST00000622233 PCDHB5Q9Y5E4 795 aa9.39□□□□□ -0.91
RAB28P4-201ENST00000622233 CDK12Q9NYV4 1490 aaPredicted RBP9.39□□□□□ -0.91
RAB28P4-201ENST00000622233 EDC4Q6P2E9 1401 aaKnown RBP9.39□□□□□ -0.91
RAB28P4-201ENST00000622233 LTN1O94822 1766 aa9.38□□□□□ -0.91
RAB28P4-201ENST00000622233 RGPD5Q99666 1765 aa9.38□□□□□ -0.91
RAB28P4-201ENST00000622233 NFAT5O94916 1531 aa9.38□□□□□ -0.91
RAB28P4-201ENST00000622233 NME2P22392 152 aa9.38□□□□□ -0.91
RAB28P4-201ENST00000622233 GBP2P32456 591 aaPredicted RBP9.38□□□□□ -0.91
RAB28P4-201ENST00000622233 FAM160A1Q05DH4 1040 aa9.38□□□□□ -0.91
RAB28P4-201ENST00000622233 USP48Q86UV5 1035 aa9.38□□□□□ -0.91
RAB28P4-201ENST00000622233 CBX8Q9HC52 389 aa9.38□□□□□ -0.91
RAB28P4-201ENST00000622233 KTN1Q86UP2 1357 aaKnown RBP9.37□□□□□ -0.91
RAB28P4-201ENST00000622233 ANKRD36BQ8N2N9 1353 aa9.37□□□□□ -0.91
RAB28P4-201ENST00000622233 TTC21BQ7Z4L5 1316 aa9.37□□□□□ -0.91
RAB28P4-201ENST00000622233 TTC21AQ8NDW8 1320 aa9.37□□□□□ -0.91
RAB28P4-201ENST00000622233 DLGAP3O95886 979 aa9.37□□□□□ -0.91
RAB28P4-201ENST00000622233 TFE3P19532 575 aaPredicted RBP9.37□□□□□ -0.91
RAB28P4-201ENST00000622233 MAOBP27338 520 aa9.37□□□□□ -0.91
RAB28P4-201ENST00000622233 ARL4DP49703 201 aa9.37□□□□□ -0.91
RAB28P4-201ENST00000622233 TMF1P82094 1093 aa9.37□□□□□ -0.91
RAB28P4-201ENST00000622233 PDZD3Q86UT5 571 aa9.37□□□□□ -0.91
RAB28P4-201ENST00000622233 FBXO11Q86XK2 927 aa9.37□□□□□ -0.91
RAB28P4-201ENST00000622233 PHC3Q8NDX5 983 aa9.37□□□□□ -0.91
RAB28P4-201ENST00000622233 UBASH3BQ8TF42 649 aa9.37□□□□□ -0.91
RAB28P4-201ENST00000622233 WNT8BQ93098 351 aa9.37□□□□□ -0.91
RAB28P4-201ENST00000622233 RSRP1Q9BUV0 290 aa9.37□□□□□ -0.91
RAB28P4-201ENST00000622233 USP26Q9BXU7 913 aa9.37□□□□□ -0.91
RAB28P4-201ENST00000622233 SLC12A5Q9H2X9 1139 aa9.37□□□□□ -0.91
RAB28P4-201ENST00000622233 SOX17Q9H6I2 414 aaPredicted RBP9.37□□□□□ -0.91
RAB28P4-201ENST00000622233 DDX41Q9UJV9 622 aaKnown RBP9.37□□□□□ -0.91
RAB28P4-201ENST00000622233 OVOS2A0A0J9YW53 1432 aa9.37□□□□□ -0.91
RAB28P4-201ENST00000622233 OVOS2Q6IE36 1432 aa9.37□□□□□ -0.91
RAB28P4-201ENST00000622233 CPDO75976 1380 aa9.37□□□□□ -0.91
RAB28P4-201ENST00000622233 ANKRD26Q9UPS8 1709 aa9.36□□□□□ -0.91
RAB28P4-201ENST00000622233 ABCC6O95255 1503 aa9.36□□□□□ -0.91
RAB28P4-201ENST00000622233 DLL1O00548 723 aa9.36□□□□□ -0.91
RAB28P4-201ENST00000622233 WISP1O95388 367 aa9.36□□□□□ -0.91
RAB28P4-201ENST00000622233 HSPA5P11021 654 aaKnown RBP9.36□□□□□ -0.91
RAB28P4-201ENST00000622233 ARNTP27540 789 aa9.36□□□□□ -0.91
RAB28P4-201ENST00000622233 COL8A1P27658 744 aa9.36□□□□□ -0.91
RAB28P4-201ENST00000622233 CD68P34810 354 aaPredicted RBP9.36□□□□□ -0.91
RAB28P4-201ENST00000622233 TNNI2P48788 182 aa9.36□□□□□ -0.91
RAB28P4-201ENST00000622233 SUZ12Q15022 739 aaKnown RBP9.36□□□□□ -0.91
RAB28P4-201ENST00000622233 GRIK4Q16099 956 aa9.36□□□□□ -0.91
RAB28P4-201ENST00000622233 SHISA2Q6UWI4 295 aa9.36□□□□□ -0.91
RAB28P4-201ENST00000622233 RELL1Q8IUW5 271 aa9.36□□□□□ -0.91
RAB28P4-201ENST00000622233 KLHL23Q8NBE8 558 aa9.36□□□□□ -0.91
RAB28P4-201ENST00000622233 ACBD3Q9H3P7 528 aa9.36□□□□□ -0.91
RAB28P4-201ENST00000622233 BRWD3Q6RI45 1802 aa9.35□□□□□ -0.91
RAB28P4-201ENST00000622233 WNK3Q9BYP7 1800 aa9.35□□□□□ -0.91
RAB28P4-201ENST00000622233 RGS12O14924 1447 aa9.35□□□□□ -0.91
RAB28P4-201ENST00000622233 PF4P02776 101 aa9.35□□□□□ -0.91
RAB28P4-201ENST00000622233 RAC1P63000 192 aa9.35□□□□□ -0.91
RAB28P4-201ENST00000622233 PTPN11Q06124 597 aaPredicted RBP9.35□□□□□ -0.91
RAB28P4-201ENST00000622233 POU4F3Q15319 338 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms