RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 ORC4O43929 436 aa17■□□□□ 0.31
CBWD3-217ENST00000621474 BACE1P56817 501 aa17■□□□□ 0.31
CBWD3-217ENST00000621474 GPAT2Q6NUI2 795 aa17■□□□□ 0.31
CBWD3-217ENST00000621474 GTF3C3Q9Y5Q9 886 aa17■□□□□ 0.31
CBWD3-217ENST00000621474 TAF6LQ9Y6J9 622 aa17■□□□□ 0.31
CBWD3-217ENST00000621474 NEDD4P46934 1319 aa17■□□□□ 0.31
CBWD3-217ENST00000621474 ZNF213O14771 459 aa16.99■□□□□ 0.31
CBWD3-217ENST00000621474 FOXN1O15353 648 aa16.99■□□□□ 0.31
CBWD3-217ENST00000621474 SLC3A2P08195 630 aaKnown RBP16.99■□□□□ 0.31
CBWD3-217ENST00000621474 CYP21A2P08686 494 aa16.99■□□□□ 0.31
CBWD3-217ENST00000621474 HMGCS2P54868 508 aa16.99■□□□□ 0.31
CBWD3-217ENST00000621474 FAM47AQ5JRC9 791 aa16.99■□□□□ 0.31
CBWD3-217ENST00000621474 AKNAD1Q5T1N1 836 aa16.99■□□□□ 0.31
CBWD3-217ENST00000621474 ZNF287Q9HBT7 754 aa16.99■□□□□ 0.31
CBWD3-217ENST00000621474 USP17L10C9JJH3 530 aa16.99■□□□□ 0.31
CBWD3-217ENST00000621474 TRPA1O75762 1119 aa16.99■□□□□ 0.31
CBWD3-217ENST00000621474 TREML2Q5T2D2 321 aa16.99■□□□□ 0.31
CBWD3-217ENST00000621474 R3HDMLQ9H3Y0 253 aa16.99■□□□□ 0.31
CBWD3-217ENST00000621474 EMILIN3Q9NT22 766 aa16.99■□□□□ 0.31
CBWD3-217ENST00000621474 SAGE1Q9NXZ1 904 aa16.99■□□□□ 0.31
CBWD3-217ENST00000621474 CTNNA3Q9UI47 895 aa16.99■□□□□ 0.31
CBWD3-217ENST00000621474 TSKSQ9UJT2 592 aa16.99■□□□□ 0.31
CBWD3-217ENST00000621474 ICA1Q05084 483 aa16.98■□□□□ 0.31
CBWD3-217ENST00000621474 IMMTQ16891 758 aaKnown RBP16.98■□□□□ 0.31
CBWD3-217ENST00000621474 ZNF444Q8N0Y2 327 aaPredicted RBP16.98■□□□□ 0.31
CBWD3-217ENST00000621474 NEDD1Q8NHV4 660 aa16.98■□□□□ 0.31
CBWD3-217ENST00000621474 CFHR5Q9BXR6 569 aa16.98■□□□□ 0.31
CBWD3-217ENST00000621474 ANO2Q9NQ90 1003 aa16.98■□□□□ 0.31
CBWD3-217ENST00000621474 RBM8AQ9Y5S9 174 aaKnown RBP16.98■□□□□ 0.31
CBWD3-217ENST00000621474 PARP14Q460N5 1801 aa16.98■□□□□ 0.31
CBWD3-217ENST00000621474 C19orf81C9J6K1 198 aa16.97■□□□□ 0.31
CBWD3-217ENST00000621474 EEF2P13639 858 aaKnown RBP16.97■□□□□ 0.31
CBWD3-217ENST00000621474 TFAP4Q01664 338 aa16.97■□□□□ 0.31
CBWD3-217ENST00000621474 KIAA1755Q5JYT7 1200 aa16.97■□□□□ 0.31
CBWD3-217ENST00000621474 ANKRD23Q86SG2 305 aa16.97■□□□□ 0.31
CBWD3-217ENST00000621474 PROCA1Q8NCQ7 364 aaPredicted RBP16.97■□□□□ 0.31
CBWD3-217ENST00000621474 CEP95Q96GE4 821 aa16.97■□□□□ 0.31
CBWD3-217ENST00000621474 KIAA1683Q9H0B3 1180 aa16.97■□□□□ 0.31
CBWD3-217ENST00000621474 KANSL2Q9H9L4 492 aa16.97■□□□□ 0.31
CBWD3-217ENST00000621474 IL17RBQ9NRM6 502 aa16.97■□□□□ 0.31
CBWD3-217ENST00000621474 U3KPZ7 1027 aaPredicted RBP16.97■□□□□ 0.31
CBWD3-217ENST00000621474 RLFQ13129 1914 aa16.97■□□□□ 0.31
CBWD3-217ENST00000621474 CASP8AP2Q9UKL3 1982 aa16.96■□□□□ 0.31
CBWD3-217ENST00000621474 NMT2O60551 498 aa16.96■□□□□ 0.31
CBWD3-217ENST00000621474 TSPY3P0CV98 308 aa16.96■□□□□ 0.31
CBWD3-217ENST00000621474 TSPY8P0CW00 308 aa16.96■□□□□ 0.31
CBWD3-217ENST00000621474 PCP11498 1178 aaKnown RBP16.96■□□□□ 0.31
CBWD3-217ENST00000621474 ZYXQ15942 572 aaKnown RBP16.96■□□□□ 0.31
CBWD3-217ENST00000621474 CASC1Q6TDU7 716 aa16.96■□□□□ 0.31
CBWD3-217ENST00000621474 GADL1Q6ZQY3 521 aa16.96■□□□□ 0.31
CBWD3-217ENST00000621474 MFSD6Q6ZSS7 791 aa16.96■□□□□ 0.31
CBWD3-217ENST00000621474 FASTKD5Q7L8L6 764 aaKnown RBP16.96■□□□□ 0.31
CBWD3-217ENST00000621474 C12orf42Q96LP6 360 aa16.96■□□□□ 0.31
CBWD3-217ENST00000621474 ZCCHC17Q9NP64 241 aaKnown RBP16.96■□□□□ 0.31
CBWD3-217ENST00000621474 MTMR4Q9NYA4 1195 aa16.96■□□□□ 0.31
CBWD3-217ENST00000621474 AGTPBP1Q9UPW5 1226 aa16.96■□□□□ 0.31
CBWD3-217ENST00000621474 TMX2Q9Y320 296 aa16.96■□□□□ 0.31
CBWD3-217ENST00000621474 PDHXO00330 501 aa16.96■□□□□ 0.3
CBWD3-217ENST00000621474 CA12O43570 354 aa16.96■□□□□ 0.3
CBWD3-217ENST00000621474 TBC1D8O95759 1140 aa16.96■□□□□ 0.3
CBWD3-217ENST00000621474 ALDH1A1P00352 501 aa16.96■□□□□ 0.3
CBWD3-217ENST00000621474 NOVP48745 357 aa16.96■□□□□ 0.3
CBWD3-217ENST00000621474 CRHR2Q13324 411 aa16.96■□□□□ 0.3
CBWD3-217ENST00000621474 NECTIN1Q15223 517 aa16.96■□□□□ 0.3
CBWD3-217ENST00000621474 KIAA1211Q6ZU35 1233 aa16.96■□□□□ 0.3
CBWD3-217ENST00000621474 STOX1Q6ZVD7 989 aa16.96■□□□□ 0.3
CBWD3-217ENST00000621474 BEGAINQ9BUH8 593 aa16.96■□□□□ 0.3
CBWD3-217ENST00000621474 TSPY2A6NKD2 308 aa16.95■□□□□ 0.3
CBWD3-217ENST00000621474 RANBP6O60518 1105 aaKnown RBP16.95■□□□□ 0.3
CBWD3-217ENST00000621474 HSPA8P11142 646 aaKnown RBP16.95■□□□□ 0.3
CBWD3-217ENST00000621474 RRP12Q5JTH9 1297 aaKnown RBP16.95■□□□□ 0.3
CBWD3-217ENST00000621474 RNF41Q9H4P4 317 aaPredicted RBP16.95■□□□□ 0.3
CBWD3-217ENST00000621474 NYAP2Q9P242 653 aa16.95■□□□□ 0.3
CBWD3-217ENST00000621474 ADGRA2Q96PE1 1338 aa16.94■□□□□ 0.3
CBWD3-217ENST00000621474 VCAM1P19320 739 aa16.94■□□□□ 0.3
CBWD3-217ENST00000621474 COL9A3Q14050 684 aaPredicted RBP16.94■□□□□ 0.3
CBWD3-217ENST00000621474 OTUD7BQ6GQQ9 843 aa16.94■□□□□ 0.3
CBWD3-217ENST00000621474 FEZ1Q99689 392 aa16.94■□□□□ 0.3
CBWD3-217ENST00000621474 TOMM22Q9NS69 142 aa16.94■□□□□ 0.3
CBWD3-217ENST00000621474 SLC45A1Q9Y2W3 748 aa16.94■□□□□ 0.3
CBWD3-217ENST00000621474 B4E1Z4 1266 aa16.93■□□□□ 0.3
CBWD3-217ENST00000621474 CYP2C8P10632 490 aa16.93■□□□□ 0.3
CBWD3-217ENST00000621474 TAF1CQ15572 869 aaPredicted RBP16.93■□□□□ 0.3
CBWD3-217ENST00000621474 USP17L2Q6R6M4 530 aa16.93■□□□□ 0.3
CBWD3-217ENST00000621474 MKL1Q969V6 931 aa16.93■□□□□ 0.3
CBWD3-217ENST00000621474 ARHGEF10LQ9HCE6 1279 aa16.93■□□□□ 0.3
CBWD3-217ENST00000621474 CENPFP49454 3210 aa16.92■□□□□ 0.3
CBWD3-217ENST00000621474 E7EWF7 191 aa16.92■□□□□ 0.3
CBWD3-217ENST00000621474 SLC27A2O14975 620 aa16.92■□□□□ 0.3
CBWD3-217ENST00000621474 KDM4AO75164 1064 aa16.92■□□□□ 0.3
CBWD3-217ENST00000621474 TTLL1O95922 423 aa16.92■□□□□ 0.3
CBWD3-217ENST00000621474 HOXA7P31268 230 aaPredicted RBP16.92■□□□□ 0.3
CBWD3-217ENST00000621474 USP14P54578 494 aa16.92■□□□□ 0.3
CBWD3-217ENST00000621474 VCPKMTQ9H867 229 aa16.92■□□□□ 0.3
CBWD3-217ENST00000621474 TCP11L1Q9NUJ3 509 aa16.92■□□□□ 0.3
CBWD3-217ENST00000621474 TMOD4Q9NZQ9 345 aa16.92■□□□□ 0.3
CBWD3-217ENST00000621474 ZSWIM5Q9P217 1185 aa16.92■□□□□ 0.3
CBWD3-217ENST00000621474 CLIP2Q9UDT6 1046 aa16.92■□□□□ 0.3
CBWD3-217ENST00000621474 ZSWIM8A7E2V4 1837 aa16.92■□□□□ 0.3
CBWD3-217ENST00000621474 LBX1P52954 281 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms