RNA–Protein interactions for RNA: ENST00000621176.1

TRIM6-212, Transcript of tripartite motif containing 6, humanhuman

TSL 5 BASIC

Gene TRIM6, Length 3,005 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-212ENST00000621176 BBXQ8WY36 941 aaPredicted RBP9.97□□□□□ -0.81
TRIM6-212ENST00000621176 LPIN2Q92539 896 aa9.97□□□□□ -0.81
TRIM6-212ENST00000621176 STAMQ92783 540 aa9.97□□□□□ -0.81
TRIM6-212ENST00000621176 PAGE5Q96GU1 130 aa9.97□□□□□ -0.81
TRIM6-212ENST00000621176 SUGCTQ9HAC7 445 aa9.97□□□□□ -0.81
TRIM6-212ENST00000621176 TMOD3Q9NYL9 352 aa9.97□□□□□ -0.81
TRIM6-212ENST00000621176 TRMT112Q9UI30 125 aaKnown RBP9.97□□□□□ -0.81
TRIM6-212ENST00000621176 CDC23Q9UJX2 597 aa9.97□□□□□ -0.81
TRIM6-212ENST00000621176 SYNRGQ9UMZ2 1314 aa9.97□□□□□ -0.81
TRIM6-212ENST00000621176 RNF225M0QZC1 329 aaPredicted RBP9.97□□□□□ -0.81
TRIM6-212ENST00000621176 TDO2P48775 406 aa9.97□□□□□ -0.81
TRIM6-212ENST00000621176 MAP3K12Q12852 859 aa9.97□□□□□ -0.81
TRIM6-212ENST00000621176 PUM3Q15397 648 aaKnown RBP9.97□□□□□ -0.81
TRIM6-212ENST00000621176 BEND6Q5SZJ8 279 aaPredicted RBP9.97□□□□□ -0.81
TRIM6-212ENST00000621176 SH3RF1Q7Z6J0 888 aa9.97□□□□□ -0.81
TRIM6-212ENST00000621176 ZNF654Q8IZM8 581 aa9.97□□□□□ -0.81
TRIM6-212ENST00000621176 ACRBPQ8NEB7 543 aa9.97□□□□□ -0.81
TRIM6-212ENST00000621176 AATFQ9NY61 560 aaKnown RBP eCLIP9.97□□□□□ -0.81
TRIM6-212ENST00000621176 VPS54Q9P1Q0 977 aa9.97□□□□□ -0.81
TRIM6-212ENST00000621176 CEP131Q9UPN4 1083 aa9.97□□□□□ -0.81
TRIM6-212ENST00000621176 PPP1R3GB7ZBB8 358 aa9.96□□□□□ -0.81
TRIM6-212ENST00000621176 KIF5CO60282 957 aa9.96□□□□□ -0.81
TRIM6-212ENST00000621176 MCM6Q14566 821 aa9.96□□□□□ -0.81
TRIM6-212ENST00000621176 SART3Q15020 963 aaKnown RBP9.96□□□□□ -0.81
TRIM6-212ENST00000621176 BRD3Q15059 726 aa9.96□□□□□ -0.81
TRIM6-212ENST00000621176 NOM1Q5C9Z4 860 aaKnown RBP9.96□□□□□ -0.81
TRIM6-212ENST00000621176 JAKMIP3Q5VZ66 844 aa9.96□□□□□ -0.81
TRIM6-212ENST00000621176 MIGA1Q8NAN2 632 aa9.96□□□□□ -0.81
TRIM6-212ENST00000621176 PIGBQ92521 554 aa9.96□□□□□ -0.81
TRIM6-212ENST00000621176 SYMPKQ92797 1274 aaKnown RBP9.96□□□□□ -0.81
TRIM6-212ENST00000621176 CDC5LQ99459 802 aaKnown RBP9.96□□□□□ -0.81
TRIM6-212ENST00000621176 NAA15Q9BXJ9 866 aaKnown RBP9.96□□□□□ -0.81
TRIM6-212ENST00000621176 SLC4A4Q9Y6R1 1079 aa9.96□□□□□ -0.81
TRIM6-212ENST00000621176 CHD4Q14839 1912 aa9.96□□□□□ -0.81
TRIM6-212ENST00000621176 TRIM75PA6NK02 468 aa9.96□□□□□ -0.82
TRIM6-212ENST00000621176 PRDM1O75626 825 aa9.96□□□□□ -0.82
TRIM6-212ENST00000621176 CDC25AP30304 524 aa9.96□□□□□ -0.82
TRIM6-212ENST00000621176 WWC2Q6AWC2 1192 aa9.96□□□□□ -0.82
TRIM6-212ENST00000621176 SLC35F6Q8N357 371 aa9.96□□□□□ -0.82
TRIM6-212ENST00000621176 PDE11AQ9HCR9 933 aa9.96□□□□□ -0.82
TRIM6-212ENST00000621176 ERICH2A1L162 156 aa9.96□□□□□ -0.82
TRIM6-212ENST00000621176 N4BP1O75113 896 aaKnown RBP9.96□□□□□ -0.82
TRIM6-212ENST00000621176 CCT6AP40227 531 aaKnown RBP9.96□□□□□ -0.82
TRIM6-212ENST00000621176 PKN1Q16512 942 aa9.96□□□□□ -0.82
TRIM6-212ENST00000621176 ZSCAN26Q16670 478 aa9.96□□□□□ -0.82
TRIM6-212ENST00000621176 KIF4BQ2VIQ3 1234 aa9.96□□□□□ -0.82
TRIM6-212ENST00000621176 MUM1L1Q5H9M0 696 aa9.96□□□□□ -0.82
TRIM6-212ENST00000621176 HNRNPLLQ8WVV9 542 aaKnown RBP9.96□□□□□ -0.82
TRIM6-212ENST00000621176 RAB21Q9UL25 225 aa9.96□□□□□ -0.82
TRIM6-212ENST00000621176 CCDC196A0A1B0GTZ2 297 aa9.95□□□□□ -0.82
TRIM6-212ENST00000621176 PDE8AO60658 829 aa9.95□□□□□ -0.82
TRIM6-212ENST00000621176 STARD3NLO95772 234 aa9.95□□□□□ -0.82
TRIM6-212ENST00000621176 LMAN1P49257 510 aa9.95□□□□□ -0.82
TRIM6-212ENST00000621176 ERVK-24P63145 666 aa9.95□□□□□ -0.82
TRIM6-212ENST00000621176 GPS2Q13227 327 aa9.95□□□□□ -0.82
TRIM6-212ENST00000621176 L1RE1Q9UN81 338 aa9.95□□□□□ -0.82
TRIM6-212ENST00000621176 RHOXF2BP0C7M4 288 aa9.95□□□□□ -0.82
TRIM6-212ENST00000621176 USP5P45974 858 aa9.95□□□□□ -0.82
TRIM6-212ENST00000621176 CEP112Q8N8E3 955 aa9.95□□□□□ -0.82
TRIM6-212ENST00000621176 MSANTD4Q8NCY6 345 aa9.95□□□□□ -0.82
TRIM6-212ENST00000621176 EXOC4Q96A65 974 aa9.95□□□□□ -0.82
TRIM6-212ENST00000621176 GSDMAQ96QA5 445 aa9.95□□□□□ -0.82
TRIM6-212ENST00000621176 RHOXF2Q9BQY4 288 aa9.95□□□□□ -0.82
TRIM6-212ENST00000621176 ABCB6Q9NP58 842 aa9.95□□□□□ -0.82
TRIM6-212ENST00000621176 CTAGE9A4FU28 777 aa9.94□□□□□ -0.82
TRIM6-212ENST00000621176 BCAMP50895 628 aa9.94□□□□□ -0.82
TRIM6-212ENST00000621176 VSNL1P62760 191 aa9.94□□□□□ -0.82
TRIM6-212ENST00000621176 SEC23AQ15436 765 aa9.94□□□□□ -0.82
TRIM6-212ENST00000621176 TMTC2Q8N394 836 aa9.94□□□□□ -0.82
TRIM6-212ENST00000621176 SDR42E1Q8WUS8 393 aa9.94□□□□□ -0.82
TRIM6-212ENST00000621176 SLC4A9Q96Q91 983 aa9.94□□□□□ -0.82
TRIM6-212ENST00000621176 CTAGE1Q96RT6 745 aa9.94□□□□□ -0.82
TRIM6-212ENST00000621176 UBAC1Q9BSL1 405 aa9.94□□□□□ -0.82
TRIM6-212ENST00000621176 PHF20Q9BVI0 1012 aa9.94□□□□□ -0.82
TRIM6-212ENST00000621176 RNF26Q9BY78 433 aaPredicted RBP9.94□□□□□ -0.82
TRIM6-212ENST00000621176 NACAP1Q9BZK3 213 aa9.94□□□□□ -0.82
TRIM6-212ENST00000621176 BLZF1Q9H2G9 400 aa9.94□□□□□ -0.82
TRIM6-212ENST00000621176 CTNND2Q9UQB3 1225 aa9.94□□□□□ -0.82
TRIM6-212ENST00000621176 COL5A2P05997 1499 aaPredicted RBP9.94□□□□□ -0.82
TRIM6-212ENST00000621176 TNKSO95271 1327 aa9.94□□□□□ -0.82
TRIM6-212ENST00000621176 FECHP22830 423 aa9.94□□□□□ -0.82
TRIM6-212ENST00000621176 PPARAQ07869 468 aa9.94□□□□□ -0.82
TRIM6-212ENST00000621176 FUT2Q10981 343 aa9.94□□□□□ -0.82
TRIM6-212ENST00000621176 KRT31Q15323 416 aa9.94□□□□□ -0.82
TRIM6-212ENST00000621176 ZNF174Q15697 407 aa9.94□□□□□ -0.82
TRIM6-212ENST00000621176 FILIP1LQ4L180 1135 aa9.94□□□□□ -0.82
TRIM6-212ENST00000621176 CT47A1Q5JQC4 288 aaPredicted RBP9.94□□□□□ -0.82
TRIM6-212ENST00000621176 ADGRA1Q86SQ6 560 aa9.94□□□□□ -0.82
TRIM6-212ENST00000621176 CNGA4Q8IV77 575 aa9.94□□□□□ -0.82
TRIM6-212ENST00000621176 CARD10Q9BWT7 1032 aa9.94□□□□□ -0.82
TRIM6-212ENST00000621176 VPS16Q9H269 839 aa9.94□□□□□ -0.82
TRIM6-212ENST00000621176 VPS18Q9P253 973 aa9.94□□□□□ -0.82
TRIM6-212ENST00000621176 FEZ2Q9UHY8 353 aaPredicted RBP9.94□□□□□ -0.82
TRIM6-212ENST00000621176 V9GY48 417 aaPredicted RBP9.94□□□□□ -0.82
TRIM6-212ENST00000621176 TIAM2Q8IVF5 1701 aa9.94□□□□□ -0.82
TRIM6-212ENST00000621176 MYH8P13535 1937 aa9.94□□□□□ -0.82
TRIM6-212ENST00000621176 SHANK3Q9BYB0 1731 aa9.93□□□□□ -0.82
TRIM6-212ENST00000621176 VGLL3A8MV65 326 aa9.93□□□□□ -0.82
TRIM6-212ENST00000621176 MINDY4BA8MYZ0 360 aa9.93□□□□□ -0.82
TRIM6-212ENST00000621176 PLEKHA8P1O95397 391 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms