RNA–Protein interactions for RNA: ENST00000621093.4

POLR2J3-221, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR2J3, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-221ENST00000621093 HHIPL1Q96JK4 782 aa12.92□□□□□ -0.34
POLR2J3-221ENST00000621093 KRT23Q9C075 422 aa12.92□□□□□ -0.34
POLR2J3-221ENST00000621093 AFG3L2Q9Y4W6 797 aa12.92□□□□□ -0.34
POLR2J3-221ENST00000621093 PLIN4Q96Q06 1357 aa12.92□□□□□ -0.34
POLR2J3-221ENST00000621093 A0A1W2PRG0 241 aa12.91□□□□□ -0.34
POLR2J3-221ENST00000621093 TRIM75PA6NK02 468 aa12.91□□□□□ -0.34
POLR2J3-221ENST00000621093 IRF6O14896 467 aa12.91□□□□□ -0.34
POLR2J3-221ENST00000621093 AOC2O75106 756 aa12.91□□□□□ -0.34
POLR2J3-221ENST00000621093 PCP11498 1178 aaKnown RBP12.91□□□□□ -0.34
POLR2J3-221ENST00000621093 EEF2P13639 858 aaKnown RBP12.91□□□□□ -0.34
POLR2J3-221ENST00000621093 VEGFBP49765 207 aa12.91□□□□□ -0.34
POLR2J3-221ENST00000621093 ATP2B2Q01814 1243 aa12.91□□□□□ -0.34
POLR2J3-221ENST00000621093 PPATQ06203 517 aa12.91□□□□□ -0.34
POLR2J3-221ENST00000621093 SPP2Q13103 211 aa12.91□□□□□ -0.34
POLR2J3-221ENST00000621093 PPIL2Q13356 520 aa12.91□□□□□ -0.34
POLR2J3-221ENST00000621093 TSGA10IPQ3SY00 556 aa12.91□□□□□ -0.34
POLR2J3-221ENST00000621093 NCOA7Q8NI08 942 aa12.91□□□□□ -0.34
POLR2J3-221ENST00000621093 ESR2Q92731 530 aa12.91□□□□□ -0.34
POLR2J3-221ENST00000621093 CAPNS2Q96L46 248 aa12.91□□□□□ -0.34
POLR2J3-221ENST00000621093 CNNM2Q9H8M5 875 aa12.91□□□□□ -0.34
POLR2J3-221ENST00000621093 GINM1Q9NU53 330 aa12.91□□□□□ -0.34
POLR2J3-221ENST00000621093 THSD7BQ9C0I4 1608 aa12.91□□□□□ -0.34
POLR2J3-221ENST00000621093 PARP14Q460N5 1801 aa12.9□□□□□ -0.34
POLR2J3-221ENST00000621093 ZKSCAN1P17029 563 aaPredicted RBP12.9□□□□□ -0.34
POLR2J3-221ENST00000621093 MCCP23508 829 aa12.9□□□□□ -0.34
POLR2J3-221ENST00000621093 ICA1Q05084 483 aa12.9□□□□□ -0.34
POLR2J3-221ENST00000621093 TRDNQ13061 729 aa12.9□□□□□ -0.34
POLR2J3-221ENST00000621093 ZYXQ15942 572 aaKnown RBP12.9□□□□□ -0.34
POLR2J3-221ENST00000621093 RALYLQ86SE5 291 aaKnown RBP12.9□□□□□ -0.34
POLR2J3-221ENST00000621093 ZNF280CQ8ND82 737 aa12.9□□□□□ -0.34
POLR2J3-221ENST00000621093 TCEANC2Q96MN5 208 aa12.9□□□□□ -0.34
POLR2J3-221ENST00000621093 JAKMIP1Q96N16 626 aaKnown RBP12.9□□□□□ -0.34
POLR2J3-221ENST00000621093 NEK1Q96PY6 1258 aa12.9□□□□□ -0.34
POLR2J3-221ENST00000621093 WDR18Q9BV38 432 aa12.9□□□□□ -0.34
POLR2J3-221ENST00000621093 LRRC2Q9BYS8 371 aa12.9□□□□□ -0.34
POLR2J3-221ENST00000621093 GPHNQ9NQX3 736 aaPredicted RBP12.9□□□□□ -0.34
POLR2J3-221ENST00000621093 MTMR4Q9NYA4 1195 aa12.9□□□□□ -0.34
POLR2J3-221ENST00000621093 CLIP2Q9UDT6 1046 aa12.9□□□□□ -0.34
POLR2J3-221ENST00000621093 WDR33Q9C0J8 1336 aaKnown RBP12.89□□□□□ -0.35
POLR2J3-221ENST00000621093 MTMR2Q13614 643 aa12.89□□□□□ -0.35
POLR2J3-221ENST00000621093 KIAA1755Q5JYT7 1200 aa12.89□□□□□ -0.35
POLR2J3-221ENST00000621093 RCSD1Q6JBY9 416 aa12.89□□□□□ -0.35
POLR2J3-221ENST00000621093 CCDC102AQ96A19 550 aa12.89□□□□□ -0.35
POLR2J3-221ENST00000621093 CHMP4CQ96CF2 233 aa12.89□□□□□ -0.35
POLR2J3-221ENST00000621093 MS4A4AQ96JQ5 239 aa12.89□□□□□ -0.35
POLR2J3-221ENST00000621093 KANSL2Q9H9L4 492 aa12.89□□□□□ -0.35
POLR2J3-221ENST00000621093 AS3MTQ9HBK9 375 aa12.89□□□□□ -0.35
POLR2J3-221ENST00000621093 SENP2Q9HC62 589 aa12.89□□□□□ -0.35
POLR2J3-221ENST00000621093 KCNH4Q9UQ05 1017 aa12.89□□□□□ -0.35
POLR2J3-221ENST00000621093 TNKSO95271 1327 aa12.88□□□□□ -0.35
POLR2J3-221ENST00000621093 PRC1O43663 620 aa12.88□□□□□ -0.35
POLR2J3-221ENST00000621093 EIF5BO60841 1220 aaKnown RBP12.88□□□□□ -0.35
POLR2J3-221ENST00000621093 ZBTB48P10074 688 aaPredicted RBP12.88□□□□□ -0.35
POLR2J3-221ENST00000621093 HMGCS2P54868 508 aa12.88□□□□□ -0.35
POLR2J3-221ENST00000621093 KIF23Q02241 960 aaPredicted RBP12.88□□□□□ -0.35
POLR2J3-221ENST00000621093 MOGSQ13724 837 aa12.88□□□□□ -0.35
POLR2J3-221ENST00000621093 KRT32Q14532 448 aa12.88□□□□□ -0.35
POLR2J3-221ENST00000621093 RASGRP2Q7LDG7 609 aa12.88□□□□□ -0.35
POLR2J3-221ENST00000621093 LRRC47Q8N1G4 583 aaKnown RBP12.88□□□□□ -0.35
POLR2J3-221ENST00000621093 ZSCAN10Q96SZ4 725 aaPredicted RBP12.88□□□□□ -0.35
POLR2J3-221ENST00000621093 FEZ1Q99689 392 aa12.88□□□□□ -0.35
POLR2J3-221ENST00000621093 C22orf23Q9BZE7 217 aa12.88□□□□□ -0.35
POLR2J3-221ENST00000621093 ARHGEF10LQ9HCE6 1279 aa12.88□□□□□ -0.35
POLR2J3-221ENST00000621093 TCP11L1Q9NUJ3 509 aa12.88□□□□□ -0.35
POLR2J3-221ENST00000621093 NYAP2Q9P242 653 aa12.88□□□□□ -0.35
POLR2J3-221ENST00000621093 RLFQ13129 1914 aa12.88□□□□□ -0.35
POLR2J3-221ENST00000621093 USP17L10C9JJH3 530 aa12.87□□□□□ -0.35
POLR2J3-221ENST00000621093 CXCL11O14625 94 aa12.87□□□□□ -0.35
POLR2J3-221ENST00000621093 TTLL1O95922 423 aa12.87□□□□□ -0.35
POLR2J3-221ENST00000621093 CASTP20810 708 aaKnown RBP12.87□□□□□ -0.35
POLR2J3-221ENST00000621093 MCM5P33992 734 aa12.87□□□□□ -0.35
POLR2J3-221ENST00000621093 NOVP48745 357 aa12.87□□□□□ -0.35
POLR2J3-221ENST00000621093 BACE1P56817 501 aa12.87□□□□□ -0.35
POLR2J3-221ENST00000621093 EXOSC10Q01780 885 aaKnown RBP12.87□□□□□ -0.35
POLR2J3-221ENST00000621093 SEC23AQ15436 765 aa12.87□□□□□ -0.35
POLR2J3-221ENST00000621093 GADL1Q6ZQY3 521 aa12.87□□□□□ -0.35
POLR2J3-221ENST00000621093 IQCA1Q86XH1 822 aa12.87□□□□□ -0.35
POLR2J3-221ENST00000621093 ENAHQ8N8S7 591 aaPredicted RBP12.87□□□□□ -0.35
POLR2J3-221ENST00000621093 BRI3BPQ8WY22 251 aa12.87□□□□□ -0.35
POLR2J3-221ENST00000621093 TMEM47Q9BQJ4 181 aa12.87□□□□□ -0.35
POLR2J3-221ENST00000621093 UPF3BQ9BZI7 483 aaKnown RBP12.87□□□□□ -0.35
POLR2J3-221ENST00000621093 EMILIN3Q9NT22 766 aa12.87□□□□□ -0.35
POLR2J3-221ENST00000621093 STX8Q9UNK0 236 aa12.87□□□□□ -0.35
POLR2J3-221ENST00000621093 MTMR7Q9Y216 660 aa12.87□□□□□ -0.35
POLR2J3-221ENST00000621093 TMX2Q9Y320 296 aa12.87□□□□□ -0.35
POLR2J3-221ENST00000621093 COL11A1P12107 1806 aaPredicted RBP12.87□□□□□ -0.35
POLR2J3-221ENST00000621093 CCL15-CCL14A0A0B4J2E2 113 aa12.86□□□□□ -0.35
POLR2J3-221ENST00000621093 A0A0G2JLL6 359 aaPredicted RBP12.86□□□□□ -0.35
POLR2J3-221ENST00000621093 IFIT3O14879 490 aaKnown RBP12.86□□□□□ -0.35
POLR2J3-221ENST00000621093 GTF2A2P52657 109 aa12.86□□□□□ -0.35
POLR2J3-221ENST00000621093 SNAPC2Q13487 334 aa12.86□□□□□ -0.35
POLR2J3-221ENST00000621093 CCL15Q16663 113 aa12.86□□□□□ -0.35
POLR2J3-221ENST00000621093 SH3D19Q5HYK7 790 aa12.86□□□□□ -0.35
POLR2J3-221ENST00000621093 BLOC1S2Q6QNY1 142 aa12.86□□□□□ -0.35
POLR2J3-221ENST00000621093 DHX32Q7L7V1 743 aaKnown RBP12.86□□□□□ -0.35
POLR2J3-221ENST00000621093 PRRT2Q7Z6L0 340 aaPredicted RBP12.86□□□□□ -0.35
POLR2J3-221ENST00000621093 DNAJC5GQ8N7S2 189 aa12.86□□□□□ -0.35
POLR2J3-221ENST00000621093 IGDCC4Q8TDY8 1250 aa12.86□□□□□ -0.35
POLR2J3-221ENST00000621093 MKL1Q969V6 931 aa12.86□□□□□ -0.35
POLR2J3-221ENST00000621093 KIF2CQ99661 725 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms