RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 C19orf81C9J6K1 198 aa21.74■■□□□ 1.07
LITAF-220ENST00000620789 PRDM1O75626 825 aa21.74■■□□□ 1.07
LITAF-220ENST00000620789 CTDSPL2Q05D32 466 aa21.74■■□□□ 1.07
LITAF-220ENST00000620789 R3HDMLQ9H3Y0 253 aa21.74■■□□□ 1.07
LITAF-220ENST00000620789 AGTPBP1Q9UPW5 1226 aa21.74■■□□□ 1.07
LITAF-220ENST00000620789 GREB1LQ9C091 1923 aaPredicted RBP21.73■■□□□ 1.07
LITAF-220ENST00000620789 SGSM2O43147 1006 aa21.73■■□□□ 1.07
LITAF-220ENST00000620789 DGKZQ13574 1117 aa21.73■■□□□ 1.07
LITAF-220ENST00000620789 NOM1Q5C9Z4 860 aaKnown RBP21.73■■□□□ 1.07
LITAF-220ENST00000620789 ZNF444Q8N0Y2 327 aaPredicted RBP21.73■■□□□ 1.07
LITAF-220ENST00000620789 ACER1Q8TDN7 264 aa21.73■■□□□ 1.07
LITAF-220ENST00000620789 FEZ1Q99689 392 aa21.73■■□□□ 1.07
LITAF-220ENST00000620789 ZFYVE28Q9HCC9 887 aa21.73■■□□□ 1.07
LITAF-220ENST00000620789 TMOD4Q9NZQ9 345 aa21.73■■□□□ 1.07
LITAF-220ENST00000620789 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.73■■□□□ 1.07
LITAF-220ENST00000620789 SLC45A1Q9Y2W3 748 aa21.73■■□□□ 1.07
LITAF-220ENST00000620789 ICA1Q05084 483 aa21.72■■□□□ 1.07
LITAF-220ENST00000620789 TREML2Q5T2D2 321 aa21.72■■□□□ 1.07
LITAF-220ENST00000620789 USP17L2Q6R6M4 530 aa21.72■■□□□ 1.07
LITAF-220ENST00000620789 KIAA1683Q9H0B3 1180 aa21.72■■□□□ 1.07
LITAF-220ENST00000620789 LAMA4Q16363 1823 aa21.71■■□□□ 1.07
LITAF-220ENST00000620789 GPR25O00155 361 aa21.71■■□□□ 1.07
LITAF-220ENST00000620789 USP14P54578 494 aa21.71■■□□□ 1.07
LITAF-220ENST00000620789 CLEC10AQ8IUN9 316 aa21.71■■□□□ 1.07
LITAF-220ENST00000620789 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.71■■□□□ 1.07
LITAF-220ENST00000620789 KANSL2Q9H9L4 492 aa21.71■■□□□ 1.07
LITAF-220ENST00000620789 A0A1W2PRG0 241 aa21.7■■□□□ 1.06
LITAF-220ENST00000620789 FGRP09769 529 aa21.7■■□□□ 1.06
LITAF-220ENST00000620789 HAND2P61296 217 aa21.7■■□□□ 1.06
LITAF-220ENST00000620789 ZYXQ15942 572 aaKnown RBP21.7■■□□□ 1.06
LITAF-220ENST00000620789 SIAH1Q8IUQ4 282 aa21.7■■□□□ 1.06
LITAF-220ENST00000620789 C12orf42Q96LP6 360 aa21.7■■□□□ 1.06
LITAF-220ENST00000620789 PARK7Q99497 189 aaKnown RBP21.7■■□□□ 1.06
LITAF-220ENST00000620789 ARHGEF10LQ9HCE6 1279 aa21.7■■□□□ 1.06
LITAF-220ENST00000620789 EMILIN3Q9NT22 766 aa21.7■■□□□ 1.06
LITAF-220ENST00000620789 CTNNA3Q9UI47 895 aa21.7■■□□□ 1.06
LITAF-220ENST00000620789 TACC3Q9Y6A5 838 aa21.7■■□□□ 1.06
LITAF-220ENST00000620789 ZNF213O14771 459 aa21.69■■□□□ 1.06
LITAF-220ENST00000620789 ORC4O43929 436 aa21.69■■□□□ 1.06
LITAF-220ENST00000620789 TLR2O60603 784 aa21.69■■□□□ 1.06
LITAF-220ENST00000620789 PABPC4Q13310 644 aaKnown RBP eCLIP21.69■■□□□ 1.06
LITAF-220ENST00000620789 ZNF296Q8WUU4 475 aaPredicted RBP21.69■■□□□ 1.06
LITAF-220ENST00000620789 NBPF3Q9H094 633 aa21.69■■□□□ 1.06
LITAF-220ENST00000620789 SH2D4AQ9H788 454 aa21.69■■□□□ 1.06
LITAF-220ENST00000620789 INCENPQ9NQS7 918 aa21.69■■□□□ 1.06
LITAF-220ENST00000620789 PLIN4Q96Q06 1357 aa21.69■■□□□ 1.06
LITAF-220ENST00000620789 IGKV6D-41A0A0C4DH26 115 aa21.68■■□□□ 1.06
LITAF-220ENST00000620789 TSPY3P0CV98 308 aa21.68■■□□□ 1.06
LITAF-220ENST00000620789 TSPY8P0CW00 308 aa21.68■■□□□ 1.06
LITAF-220ENST00000620789 CYP2C8P10632 490 aa21.68■■□□□ 1.06
LITAF-220ENST00000620789 EEF2P13639 858 aaKnown RBP21.68■■□□□ 1.06
LITAF-220ENST00000620789 FAM47AQ5JRC9 791 aa21.68■■□□□ 1.06
LITAF-220ENST00000620789 ESYT1Q9BSJ8 1104 aa21.68■■□□□ 1.06
LITAF-220ENST00000620789 PNMA3Q9UL41 463 aa21.68■■□□□ 1.06
LITAF-220ENST00000620789 TMX2Q9Y320 296 aa21.68■■□□□ 1.06
LITAF-220ENST00000620789 ADGRA2Q96PE1 1338 aa21.68■■□□□ 1.06
LITAF-220ENST00000620789 CASP8AP2Q9UKL3 1982 aa21.68■■□□□ 1.06
LITAF-220ENST00000620789 FKTNO75072 461 aa21.67■■□□□ 1.06
LITAF-220ENST00000620789 CDC45O75419 566 aa21.67■■□□□ 1.06
LITAF-220ENST00000620789 PCP11498 1178 aaKnown RBP21.67■■□□□ 1.06
LITAF-220ENST00000620789 TFAP4Q01664 338 aa21.67■■□□□ 1.06
LITAF-220ENST00000620789 PTH1RQ03431 593 aa21.67■■□□□ 1.06
LITAF-220ENST00000620789 IMMTQ16891 758 aaKnown RBP21.67■■□□□ 1.06
LITAF-220ENST00000620789 AKNAD1Q5T1N1 836 aa21.67■■□□□ 1.06
LITAF-220ENST00000620789 TBC1D10CQ8IV04 446 aa21.67■■□□□ 1.06
LITAF-220ENST00000620789 NEDD1Q8NHV4 660 aa21.67■■□□□ 1.06
LITAF-220ENST00000620789 STAG1Q8WVM7 1258 aa21.67■■□□□ 1.06
LITAF-220ENST00000620789 RNF41Q9H4P4 317 aaPredicted RBP21.67■■□□□ 1.06
LITAF-220ENST00000620789 TSPY2A6NKD2 308 aa21.66■■□□□ 1.06
LITAF-220ENST00000620789 VCAM1P19320 739 aa21.66■■□□□ 1.06
LITAF-220ENST00000620789 HOXA7P31268 230 aaPredicted RBP21.66■■□□□ 1.06
LITAF-220ENST00000620789 ATP2B2Q01814 1243 aa21.66■■□□□ 1.06
LITAF-220ENST00000620789 CASC1Q6TDU7 716 aa21.66■■□□□ 1.06
LITAF-220ENST00000620789 MFSD6Q6ZSS7 791 aa21.66■■□□□ 1.06
LITAF-220ENST00000620789 TOMM22Q9NS69 142 aa21.66■■□□□ 1.06
LITAF-220ENST00000620789 NYAP2Q9P242 653 aa21.66■■□□□ 1.06
LITAF-220ENST00000620789 RANBP6O60518 1105 aaKnown RBP21.65■■□□□ 1.06
LITAF-220ENST00000620789 OSBPP22059 807 aa21.65■■□□□ 1.06
LITAF-220ENST00000620789 COL13A1Q5TAT6 717 aaPredicted RBP21.65■■□□□ 1.06
LITAF-220ENST00000620789 C17orf99Q6UX52 265 aa21.65■■□□□ 1.06
LITAF-220ENST00000620789 SMCR8Q8TEV9 937 aaPredicted RBP21.65■■□□□ 1.06
LITAF-220ENST00000620789 CEP95Q96GE4 821 aa21.65■■□□□ 1.06
LITAF-220ENST00000620789 ASCC2Q9H1I8 757 aaPredicted RBP21.65■■□□□ 1.06
LITAF-220ENST00000620789 VCPKMTQ9H867 229 aa21.65■■□□□ 1.06
LITAF-220ENST00000620789 MTMR4Q9NYA4 1195 aa21.65■■□□□ 1.06
LITAF-220ENST00000620789 U3KPZ7 1027 aaPredicted RBP21.65■■□□□ 1.06
LITAF-220ENST00000620789 IRX3P78415 501 aaPredicted RBP21.64■■□□□ 1.05
LITAF-220ENST00000620789 SP3Q02447 781 aa21.64■■□□□ 1.05
LITAF-220ENST00000620789 RRP12Q5JTH9 1297 aaKnown RBP21.64■■□□□ 1.05
LITAF-220ENST00000620789 KIAA1211Q6ZU35 1233 aa21.64■■□□□ 1.05
LITAF-220ENST00000620789 LPAR1Q92633 364 aa21.64■■□□□ 1.05
LITAF-220ENST00000620789 MAP4K1Q92918 833 aa21.64■■□□□ 1.05
LITAF-220ENST00000620789 CPA4Q9UI42 421 aa21.64■■□□□ 1.05
LITAF-220ENST00000620789 NEDD4P46934 1319 aa21.63■■□□□ 1.05
LITAF-220ENST00000620789 USP17L15C9J2P7 530 aa21.63■■□□□ 1.05
LITAF-220ENST00000620789 USP17L13C9JLJ4 530 aa21.63■■□□□ 1.05
LITAF-220ENST00000620789 USP17L11C9JVI0 530 aa21.63■■□□□ 1.05
LITAF-220ENST00000620789 USP17L18D6R9N7 530 aa21.63■■□□□ 1.05
LITAF-220ENST00000620789 USP17L22D6RA61 530 aa21.63■■□□□ 1.05
LITAF-220ENST00000620789 USP17L17D6RBQ6 530 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms