RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, human

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBFOX1-223	ENST00000620507	SLC4A9	Q96Q91	983 aa		10.44	□□□□□ -0.74
RBFOX1-223	ENST00000620507	BRIP1	Q9BX63	1249 aa		10.44	□□□□□ -0.74
RBFOX1-223	ENST00000620507	TANGO6	Q9C0B7	1094 aa		10.44	□□□□□ -0.74
RBFOX1-223	ENST00000620507	SYNRG	Q9UMZ2	1314 aa		10.44	□□□□□ -0.74
RBFOX1-223	ENST00000620507	AKR1B15	C9JRZ8	316 aa	Predicted RBP	10.43	□□□□□ -0.74
RBFOX1-223	ENST00000620507	NTSR2	O95665	410 aa		10.43	□□□□□ -0.74
RBFOX1-223	ENST00000620507	GNA11	P29992	359 aa		10.43	□□□□□ -0.74
RBFOX1-223	ENST00000620507	GUCY1A2	P33402	732 aa		10.43	□□□□□ -0.74
RBFOX1-223	ENST00000620507	INTS5	Q6P9B9	1019 aa	Known RBP	10.43	□□□□□ -0.74
RBFOX1-223	ENST00000620507	RRP36	Q96EU6	259 aa	Known RBP	10.43	□□□□□ -0.74
RBFOX1-223	ENST00000620507	MAPK8IP1	Q9UQF2	711 aa		10.43	□□□□□ -0.74
RBFOX1-223	ENST00000620507	BCL9	O00512	1426 aa		10.43	□□□□□ -0.74
RBFOX1-223	ENST00000620507	IDE	P14735	1019 aa		10.43	□□□□□ -0.74
RBFOX1-223	ENST00000620507	FGFR2	P21802	821 aa		10.43	□□□□□ -0.74
RBFOX1-223	ENST00000620507	PTPRE	P23469	700 aa		10.43	□□□□□ -0.74
RBFOX1-223	ENST00000620507	U2AF2	P26368	475 aa	Known RBP eCLIP	10.43	□□□□□ -0.74
RBFOX1-223	ENST00000620507	CCT6A	P40227	531 aa	Known RBP	10.43	□□□□□ -0.74
RBFOX1-223	ENST00000620507	GRAMD1C	Q8IYS0	662 aa		10.43	□□□□□ -0.74
RBFOX1-223	ENST00000620507	ENAH	Q8N8S7	591 aa	Predicted RBP	10.43	□□□□□ -0.74
RBFOX1-223	ENST00000620507	IGSF22	Q8N9C0	903 aa		10.43	□□□□□ -0.74
RBFOX1-223	ENST00000620507	CAGE1	Q8TC20	777 aa		10.43	□□□□□ -0.74
RBFOX1-223	ENST00000620507	DNAJC5	Q9H3Z4	198 aa		10.43	□□□□□ -0.74
RBFOX1-223	ENST00000620507	DEF6	Q9H4E7	631 aa		10.43	□□□□□ -0.74
RBFOX1-223	ENST00000620507	USP21	Q9UK80	565 aa		10.43	□□□□□ -0.74
RBFOX1-223	ENST00000620507	ZHX1	Q9UKY1	873 aa	Predicted RBP	10.43	□□□□□ -0.74
RBFOX1-223	ENST00000620507	SRPRB	Q9Y5M8	271 aa	Known RBP	10.43	□□□□□ -0.74
RBFOX1-223	ENST00000620507	PRPF3	O43395	683 aa	Known RBP	10.43	□□□□□ -0.74
RBFOX1-223	ENST00000620507	PARP1	P09874	1014 aa	Known RBP	10.43	□□□□□ -0.74
RBFOX1-223	ENST00000620507	MTIF2	P46199	727 aa	Known RBP	10.43	□□□□□ -0.74
RBFOX1-223	ENST00000620507	KIAA1328	Q86T90	577 aa		10.43	□□□□□ -0.74
RBFOX1-223	ENST00000620507	SYMPK	Q92797	1274 aa	Known RBP	10.43	□□□□□ -0.74
RBFOX1-223	ENST00000620507	GGA1	Q9UJY5	639 aa		10.43	□□□□□ -0.74
RBFOX1-223	ENST00000620507	CTNND2	Q9UQB3	1225 aa		10.43	□□□□□ -0.74
RBFOX1-223	ENST00000620507	SPATA31A1	Q5TZJ5	1347 aa		10.43	□□□□□ -0.74
RBFOX1-223	ENST00000620507	SALL1	Q9NSC2	1324 aa		10.43	□□□□□ -0.74
RBFOX1-223	ENST00000620507	PLEKHA8P1	O95397	391 aa		10.42	□□□□□ -0.74
RBFOX1-223	ENST00000620507	PRDX5	P30044	214 aa		10.42	□□□□□ -0.74
RBFOX1-223	ENST00000620507	KARS	Q15046	597 aa	Known RBP	10.42	□□□□□ -0.74
RBFOX1-223	ENST00000620507	LETM2	Q2VYF4	491 aa		10.42	□□□□□ -0.74
RBFOX1-223	ENST00000620507	FAM84B	Q96KN1	310 aa	Predicted RBP	10.42	□□□□□ -0.74
RBFOX1-223	ENST00000620507	BPIFA3	Q9BQP9	254 aa		10.42	□□□□□ -0.74
RBFOX1-223	ENST00000620507	SRRT	Q9BXP5	876 aa	Known RBP	10.42	□□□□□ -0.74
RBFOX1-223	ENST00000620507	ZC3H12C	Q9C0D7	883 aa	Known RBP	10.42	□□□□□ -0.74
RBFOX1-223	ENST00000620507	BLZF1	Q9H2G9	400 aa		10.42	□□□□□ -0.74
RBFOX1-223	ENST00000620507	EXOC1	Q9NV70	894 aa		10.42	□□□□□ -0.74
RBFOX1-223	ENST00000620507	RCAN1	P53805	252 aa		10.42	□□□□□ -0.74
RBFOX1-223	ENST00000620507	AXDND1	Q5T1B0	1012 aa	Predicted RBP	10.42	□□□□□ -0.74
RBFOX1-223	ENST00000620507	FKBP15	Q5T1M5	1219 aa		10.42	□□□□□ -0.74
RBFOX1-223	ENST00000620507	TBC1D9B	Q66K14	1250 aa		10.42	□□□□□ -0.74
RBFOX1-223	ENST00000620507	WWC2	Q6AWC2	1192 aa		10.42	□□□□□ -0.74
RBFOX1-223	ENST00000620507	BLID	Q8IZY5	108 aa		10.42	□□□□□ -0.74
RBFOX1-223	ENST00000620507	ZNF397	Q8NF99	534 aa	Predicted RBP	10.42	□□□□□ -0.74
RBFOX1-223	ENST00000620507	OXER1	Q8TDS5	423 aa		10.42	□□□□□ -0.74
RBFOX1-223	ENST00000620507	LZTFL1	Q9NQ48	299 aa		10.42	□□□□□ -0.74
RBFOX1-223	ENST00000620507	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	10.42	□□□□□ -0.74
RBFOX1-223	ENST00000620507	RIMBP2	O15034	1052 aa		10.42	□□□□□ -0.74
RBFOX1-223	ENST00000620507	ADK	P55263	362 aa	Known RBP	10.42	□□□□□ -0.74
RBFOX1-223	ENST00000620507	ASIC1	P78348	528 aa		10.42	□□□□□ -0.74
RBFOX1-223	ENST00000620507	VGLL2	Q8N8G2	317 aa		10.42	□□□□□ -0.74
RBFOX1-223	ENST00000620507	VPS16	Q9H269	839 aa		10.42	□□□□□ -0.74
RBFOX1-223	ENST00000620507	ZSWIM4	Q9H7M6	989 aa		10.42	□□□□□ -0.74
RBFOX1-223	ENST00000620507	MAN1B1	Q9UKM7	699 aa		10.42	□□□□□ -0.74
RBFOX1-223	ENST00000620507	PTPN21	Q16825	1174 aa		10.42	□□□□□ -0.74
RBFOX1-223	ENST00000620507	SMIM5	Q71RC9	77 aa		10.42	□□□□□ -0.74
RBFOX1-223	ENST00000620507	ZNF215	Q9UL58	517 aa	Predicted RBP	10.42	□□□□□ -0.74
RBFOX1-223	ENST00000620507	PSD	A5PKW4	1024 aa	Predicted RBP	10.41	□□□□□ -0.74
RBFOX1-223	ENST00000620507	RPS6KA4	O75676	772 aa		10.41	□□□□□ -0.74
RBFOX1-223	ENST00000620507	HLA-DOA	P06340	250 aa		10.41	□□□□□ -0.74
RBFOX1-223	ENST00000620507	BRD2	P25440	801 aa	Known RBP	10.41	□□□□□ -0.74
RBFOX1-223	ENST00000620507	HMGB2	P26583	209 aa	Known RBP	10.41	□□□□□ -0.74
RBFOX1-223	ENST00000620507	HSP90B2P	Q58FF3	399 aa		10.41	□□□□□ -0.74
RBFOX1-223	ENST00000620507	ILDR1	Q86SU0	546 aa	Predicted RBP	10.41	□□□□□ -0.74
RBFOX1-223	ENST00000620507	CNGA4	Q8IV77	575 aa		10.41	□□□□□ -0.74
RBFOX1-223	ENST00000620507	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	10.41	□□□□□ -0.74
RBFOX1-223	ENST00000620507	RBM17	Q96I25	401 aa	Known RBP	10.41	□□□□□ -0.74
RBFOX1-223	ENST00000620507	EPSTI1	Q96J88	318 aa		10.41	□□□□□ -0.74
RBFOX1-223	ENST00000620507	NARF	Q9UHQ1	456 aa		10.41	□□□□□ -0.74
RBFOX1-223	ENST00000620507	USP17L8	P0C7I0	530 aa		10.41	□□□□□ -0.74
RBFOX1-223	ENST00000620507	TRIM21	P19474	475 aa	Known RBP	10.41	□□□□□ -0.74
RBFOX1-223	ENST00000620507	PLCD1	P51178	756 aa		10.41	□□□□□ -0.74
RBFOX1-223	ENST00000620507	UBXN1	Q04323	297 aa		10.41	□□□□□ -0.74
RBFOX1-223	ENST00000620507	SF3B3	Q15393	1217 aa	Known RBP	10.41	□□□□□ -0.74
RBFOX1-223	ENST00000620507	CERS3	Q8IU89	383 aa		10.41	□□□□□ -0.74
RBFOX1-223	ENST00000620507	SLFN14	P0C7P3	912 aa		10.41	□□□□□ -0.74
RBFOX1-223	ENST00000620507	ETF1	P62495	437 aa	Known RBP	10.41	□□□□□ -0.74
RBFOX1-223	ENST00000620507	PAK1	Q13153	545 aa		10.41	□□□□□ -0.74
RBFOX1-223	ENST00000620507	MRC1	P22897	1456 aa		10.41	□□□□□ -0.74
RBFOX1-223	ENST00000620507	TCRBV5S4A2T	A0A5A2	114 aa		10.4	□□□□□ -0.74
RBFOX1-223	ENST00000620507	UBE2Q2L	H0YL09	131 aa		10.4	□□□□□ -0.74
RBFOX1-223	ENST00000620507	ERLIN1	O75477	346 aa		10.4	□□□□□ -0.74
RBFOX1-223	ENST00000620507	ELF2	Q15723	593 aa		10.4	□□□□□ -0.74
RBFOX1-223	ENST00000620507	MFSD14B	Q5SR56	506 aa		10.4	□□□□□ -0.74
RBFOX1-223	ENST00000620507	CTR9	Q6PD62	1173 aa		10.4	□□□□□ -0.74
RBFOX1-223	ENST00000620507	FAM114A1	Q8IWE2	563 aa		10.4	□□□□□ -0.74
RBFOX1-223	ENST00000620507	GSDMA	Q96QA5	445 aa		10.4	□□□□□ -0.74
RBFOX1-223	ENST00000620507	FEZ1	Q99689	392 aa		10.4	□□□□□ -0.74
RBFOX1-223	ENST00000620507	DCP1A	Q9NPI6	582 aa	Predicted RBP	10.4	□□□□□ -0.74
RBFOX1-223	ENST00000620507	LEMD3	Q9Y2U8	911 aa		10.4	□□□□□ -0.74
RBFOX1-223	ENST00000620507	ERCC5	P28715	1186 aa	Predicted RBP	10.4	□□□□□ -0.74
RBFOX1-223	ENST00000620507	BMS1	Q14692	1282 aa	Known RBP	10.4	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms