RNA–Protein interactions for RNA: ENST00000620424.1

SYNRG-228, Transcript of synergin gamma, humanhuman

TSL 3

Gene SYNRG, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-228ENST00000620424 PATL2C9JE40 543 aaKnown RBP11.34□□□□□ -0.59
SYNRG-228ENST00000620424 BCRP11274 1271 aa11.34□□□□□ -0.59
SYNRG-228ENST00000620424 GSPT1P15170 499 aaKnown RBP11.34□□□□□ -0.59
SYNRG-228ENST00000620424 TDO2P48775 406 aa11.34□□□□□ -0.59
SYNRG-228ENST00000620424 SBK1Q52WX2 424 aa11.34□□□□□ -0.59
SYNRG-228ENST00000620424 KIAA1755Q5JYT7 1200 aa11.34□□□□□ -0.59
SYNRG-228ENST00000620424 SIAH1Q8IUQ4 282 aa11.34□□□□□ -0.59
SYNRG-228ENST00000620424 PROCA1Q8NCQ7 364 aaPredicted RBP11.34□□□□□ -0.59
SYNRG-228ENST00000620424 PARK7Q99497 189 aaKnown RBP11.34□□□□□ -0.59
SYNRG-228ENST00000620424 ASCC2Q9H1I8 757 aaPredicted RBP11.34□□□□□ -0.59
SYNRG-228ENST00000620424 GINM1Q9NU53 330 aa11.34□□□□□ -0.59
SYNRG-228ENST00000620424 ARPP21Q9UBL0 812 aaPredicted RBP11.34□□□□□ -0.59
SYNRG-228ENST00000620424 SWAP70Q9UH65 585 aa11.34□□□□□ -0.59
SYNRG-228ENST00000620424 USP17L10C9JJH3 530 aa11.33□□□□□ -0.6
SYNRG-228ENST00000620424 PRDM1O75626 825 aa11.33□□□□□ -0.6
SYNRG-228ENST00000620424 GNAT2P19087 354 aa11.33□□□□□ -0.6
SYNRG-228ENST00000620424 SDSP20132 328 aa11.33□□□□□ -0.6
SYNRG-228ENST00000620424 RASA1P20936 1047 aa11.33□□□□□ -0.6
SYNRG-228ENST00000620424 LRRFIP1Q32MZ4 808 aaKnown RBP11.33□□□□□ -0.6
SYNRG-228ENST00000620424 GIMAP6Q6P9H5 292 aa11.33□□□□□ -0.6
SYNRG-228ENST00000620424 POTEEQ6S8J3 1075 aa11.33□□□□□ -0.6
SYNRG-228ENST00000620424 ERO1AQ96HE7 468 aa11.33□□□□□ -0.6
SYNRG-228ENST00000620424 DDRGK1Q96HY6 314 aa11.33□□□□□ -0.6
SYNRG-228ENST00000620424 FEZ1Q99689 392 aa11.33□□□□□ -0.6
SYNRG-228ENST00000620424 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.33□□□□□ -0.6
SYNRG-228ENST00000620424 TBC1D2Q9BYX2 928 aa11.33□□□□□ -0.6
SYNRG-228ENST00000620424 CABP5Q9NP86 173 aa11.33□□□□□ -0.6
SYNRG-228ENST00000620424 INCENPQ9NQS7 918 aa11.33□□□□□ -0.6
SYNRG-228ENST00000620424 SLC45A1Q9Y2W3 748 aa11.33□□□□□ -0.6
SYNRG-228ENST00000620424 ROBO3Q96MS0 1386 aa11.32□□□□□ -0.6
SYNRG-228ENST00000620424 CCDC85CA6NKD9 419 aa11.32□□□□□ -0.6
SYNRG-228ENST00000620424 C19orf81C9J6K1 198 aa11.32□□□□□ -0.6
SYNRG-228ENST00000620424 LACTBP83111 547 aaPredicted RBP11.32□□□□□ -0.6
SYNRG-228ENST00000620424 CTDSPL2Q05D32 466 aa11.32□□□□□ -0.6
SYNRG-228ENST00000620424 TTC22Q5TAA0 569 aa11.32□□□□□ -0.6
SYNRG-228ENST00000620424 USP17L2Q6R6M4 530 aa11.32□□□□□ -0.6
SYNRG-228ENST00000620424 AMOTL1Q8IY63 956 aa11.32□□□□□ -0.6
SYNRG-228ENST00000620424 ANKRD13CQ8N6S4 541 aa11.32□□□□□ -0.6
SYNRG-228ENST00000620424 TRIM47Q96LD4 638 aa11.32□□□□□ -0.6
SYNRG-228ENST00000620424 KIAA1683Q9H0B3 1180 aa11.32□□□□□ -0.6
SYNRG-228ENST00000620424 IL25Q9H293 177 aa11.32□□□□□ -0.6
SYNRG-228ENST00000620424 EFCC1Q9HA90 598 aa11.32□□□□□ -0.6
SYNRG-228ENST00000620424 HELLSQ9NRZ9 838 aa11.32□□□□□ -0.6
SYNRG-228ENST00000620424 TMOD4Q9NZQ9 345 aa11.32□□□□□ -0.6
SYNRG-228ENST00000620424 HPS5Q9UPZ3 1129 aa11.32□□□□□ -0.6
SYNRG-228ENST00000620424 PPARAQ07869 468 aa11.31□□□□□ -0.6
SYNRG-228ENST00000620424 MCMDC2Q4G0Z9 681 aa11.31□□□□□ -0.6
SYNRG-228ENST00000620424 FBXO46Q6PJ61 603 aaPredicted RBP11.31□□□□□ -0.6
SYNRG-228ENST00000620424 TMEM179Q6ZVK1 233 aa11.31□□□□□ -0.6
SYNRG-228ENST00000620424 SMCR8Q8TEV9 937 aaPredicted RBP11.31□□□□□ -0.6
SYNRG-228ENST00000620424 P2RX7Q99572 595 aaKnown RBP11.31□□□□□ -0.6
SYNRG-228ENST00000620424 NAPBQ9H115 298 aa11.31□□□□□ -0.6
SYNRG-228ENST00000620424 PTPN22Q9Y2R2 807 aa11.31□□□□□ -0.6
SYNRG-228ENST00000620424 PTCH2Q9Y6C5 1203 aa11.31□□□□□ -0.6
SYNRG-228ENST00000620424 EEF2P13639 858 aaKnown RBP11.3□□□□□ -0.6
SYNRG-228ENST00000620424 VCAM1P19320 739 aa11.3□□□□□ -0.6
SYNRG-228ENST00000620424 PSMC4P43686 418 aa11.3□□□□□ -0.6
SYNRG-228ENST00000620424 IRX3P78415 501 aaPredicted RBP11.3□□□□□ -0.6
SYNRG-228ENST00000620424 ICA1Q05084 483 aa11.3□□□□□ -0.6
SYNRG-228ENST00000620424 CWC27Q6UX04 472 aaKnown RBP11.3□□□□□ -0.6
SYNRG-228ENST00000620424 SPICE1Q8N0Z3 855 aa11.3□□□□□ -0.6
SYNRG-228ENST00000620424 NKX2-3Q8TAU0 364 aa11.3□□□□□ -0.6
SYNRG-228ENST00000620424 C12orf42Q96LP6 360 aa11.3□□□□□ -0.6
SYNRG-228ENST00000620424 CCDC17Q96LX7 622 aa11.3□□□□□ -0.6
SYNRG-228ENST00000620424 NACAP1Q9BZK3 213 aa11.3□□□□□ -0.6
SYNRG-228ENST00000620424 TXNRD2Q9NNW7 524 aa11.3□□□□□ -0.6
SYNRG-228ENST00000620424 MYH8P13535 1937 aa11.3□□□□□ -0.6
SYNRG-228ENST00000620424 CCDC171Q6TFL3 1326 aa11.3□□□□□ -0.6
SYNRG-228ENST00000620424 GREB1LQ9C091 1923 aaPredicted RBP11.29□□□□□ -0.6
SYNRG-228ENST00000620424 IGKV6D-41A0A0C4DH26 115 aa11.29□□□□□ -0.6
SYNRG-228ENST00000620424 FGAP02671 866 aa11.29□□□□□ -0.6
SYNRG-228ENST00000620424 HSPD1P10809 573 aaKnown RBP11.29□□□□□ -0.6
SYNRG-228ENST00000620424 OSBPP22059 807 aa11.29□□□□□ -0.6
SYNRG-228ENST00000620424 HOXA7P31268 230 aaPredicted RBP11.29□□□□□ -0.6
SYNRG-228ENST00000620424 HERVK_113P62684 666 aa11.29□□□□□ -0.6
SYNRG-228ENST00000620424 ATP2B2Q01814 1243 aa11.29□□□□□ -0.6
SYNRG-228ENST00000620424 ALX1Q15699 326 aa11.29□□□□□ -0.6
SYNRG-228ENST00000620424 PKN2Q16513 984 aaKnown RBP11.29□□□□□ -0.6
SYNRG-228ENST00000620424 FAM47AQ5JRC9 791 aa11.29□□□□□ -0.6
SYNRG-228ENST00000620424 NBPF3Q9H094 633 aa11.29□□□□□ -0.6
SYNRG-228ENST00000620424 RPAP3Q9H6T3 665 aaPredicted RBP11.29□□□□□ -0.6
SYNRG-228ENST00000620424 MKNK2Q9HBH9 465 aa11.29□□□□□ -0.6
SYNRG-228ENST00000620424 PNMA3Q9UL41 463 aa11.29□□□□□ -0.6
SYNRG-228ENST00000620424 GABRQQ9UN88 632 aa11.29□□□□□ -0.6
SYNRG-228ENST00000620424 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.29□□□□□ -0.6
SYNRG-228ENST00000620424 CNMDO75829 334 aa11.28□□□□□ -0.6
SYNRG-228ENST00000620424 FMNL1O95466 1100 aaPredicted RBP11.28□□□□□ -0.6
SYNRG-228ENST00000620424 SOX10P56693 466 aa11.28□□□□□ -0.6
SYNRG-228ENST00000620424 HAND2P61296 217 aa11.28□□□□□ -0.6
SYNRG-228ENST00000620424 PABPC4Q13310 644 aaKnown RBP eCLIP11.28□□□□□ -0.6
SYNRG-228ENST00000620424 KIF22Q14807 665 aa11.28□□□□□ -0.6
SYNRG-228ENST00000620424 CATSPERGQ6ZRH7 1159 aa11.28□□□□□ -0.6
SYNRG-228ENST00000620424 KANSL2Q9H9L4 492 aa11.28□□□□□ -0.6
SYNRG-228ENST00000620424 DIAPH3Q9NSV4 1193 aa11.28□□□□□ -0.6
SYNRG-228ENST00000620424 RBPJLQ9UBG7 517 aa11.28□□□□□ -0.6
SYNRG-228ENST00000620424 TAOK2Q9UL54 1235 aa11.28□□□□□ -0.6
SYNRG-228ENST00000620424 TMX2Q9Y320 296 aa11.28□□□□□ -0.6
SYNRG-228ENST00000620424 USP17L15C9J2P7 530 aa11.27□□□□□ -0.61
SYNRG-228ENST00000620424 USP17L13C9JLJ4 530 aa11.27□□□□□ -0.61
SYNRG-228ENST00000620424 USP17L11C9JVI0 530 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms