RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 ERVK-9P63128 1117 aa13.54□□□□□ -0.24
TARDBP-221ENST00000619555 ERVK-24P63145 666 aa13.54□□□□□ -0.24
TARDBP-221ENST00000619555 TTF1Q15361 905 aaPredicted RBP13.54□□□□□ -0.24
TARDBP-221ENST00000619555 ABCB5Q2M3G0 1257 aa13.54□□□□□ -0.24
TARDBP-221ENST00000619555 TMED8Q6PL24 325 aaPredicted RBP13.54□□□□□ -0.24
TARDBP-221ENST00000619555 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.54□□□□□ -0.24
TARDBP-221ENST00000619555 FEZ1Q99689 392 aa13.54□□□□□ -0.24
TARDBP-221ENST00000619555 NUDT12Q9BQG2 462 aa13.54□□□□□ -0.24
TARDBP-221ENST00000619555 HMX1Q9NP08 348 aaPredicted RBP13.54□□□□□ -0.24
TARDBP-221ENST00000619555 DDX19BQ9UMR2 479 aa13.54□□□□□ -0.24
TARDBP-221ENST00000619555 NR2E3Q9Y5X4 410 aa13.54□□□□□ -0.24
TARDBP-221ENST00000619555 RPTORQ8N122 1335 aa13.54□□□□□ -0.24
TARDBP-221ENST00000619555 ZNF532Q9HCE3 1301 aa13.54□□□□□ -0.24
TARDBP-221ENST00000619555 TCRBV5S4A2TA0A5A2 114 aa13.53□□□□□ -0.24
TARDBP-221ENST00000619555 USP17L15C9J2P7 530 aa13.53□□□□□ -0.24
TARDBP-221ENST00000619555 USP17L13C9JLJ4 530 aa13.53□□□□□ -0.24
TARDBP-221ENST00000619555 USP17L11C9JVI0 530 aa13.53□□□□□ -0.24
TARDBP-221ENST00000619555 USP17L18D6R9N7 530 aa13.53□□□□□ -0.24
TARDBP-221ENST00000619555 USP17L22D6RA61 530 aa13.53□□□□□ -0.24
TARDBP-221ENST00000619555 USP17L17D6RBQ6 530 aa13.53□□□□□ -0.24
TARDBP-221ENST00000619555 USP17L19D6RCP7 530 aa13.53□□□□□ -0.24
TARDBP-221ENST00000619555 USP17L20D6RJB6 530 aa13.53□□□□□ -0.24
TARDBP-221ENST00000619555 HMMRO75330 724 aa13.53□□□□□ -0.24
TARDBP-221ENST00000619555 CNMDO75829 334 aa13.53□□□□□ -0.24
TARDBP-221ENST00000619555 CAPN2P17655 700 aa13.53□□□□□ -0.24
TARDBP-221ENST00000619555 MAPK4P31152 587 aa13.53□□□□□ -0.24
TARDBP-221ENST00000619555 USP17L24Q0WX57 530 aa13.53□□□□□ -0.24
TARDBP-221ENST00000619555 SLFNL1Q499Z3 407 aa13.53□□□□□ -0.24
TARDBP-221ENST00000619555 CCAR1Q8IX12 1150 aaKnown RBP13.53□□□□□ -0.24
TARDBP-221ENST00000619555 C12orf42Q96LP6 360 aa13.53□□□□□ -0.24
TARDBP-221ENST00000619555 CRNKL1Q9BZJ0 848 aaKnown RBP13.53□□□□□ -0.24
TARDBP-221ENST00000619555 CABP5Q9NP86 173 aa13.53□□□□□ -0.24
TARDBP-221ENST00000619555 MCM9Q9NXL9 1143 aa13.53□□□□□ -0.24
TARDBP-221ENST00000619555 ALPK3Q96L96 1907 aa13.52□□□□□ -0.24
TARDBP-221ENST00000619555 EVI5O60447 810 aa13.52□□□□□ -0.25
TARDBP-221ENST00000619555 CYP2D6P10635 497 aa13.52□□□□□ -0.25
TARDBP-221ENST00000619555 XRCC5P13010 732 aaKnown RBP13.52□□□□□ -0.25
TARDBP-221ENST00000619555 PRKAR2AP13861 404 aaKnown RBP13.52□□□□□ -0.25
TARDBP-221ENST00000619555 USP14P54578 494 aa13.52□□□□□ -0.25
TARDBP-221ENST00000619555 GABPAQ06546 454 aa13.52□□□□□ -0.25
TARDBP-221ENST00000619555 PDE3AQ14432 1141 aa13.52□□□□□ -0.25
TARDBP-221ENST00000619555 SEPT2Q15019 361 aa13.52□□□□□ -0.25
TARDBP-221ENST00000619555 CATSPERGQ6ZRH7 1159 aa13.52□□□□□ -0.25
TARDBP-221ENST00000619555 GPR142Q7Z601 462 aa13.52□□□□□ -0.25
TARDBP-221ENST00000619555 NECAB2Q7Z6G3 386 aa13.52□□□□□ -0.25
TARDBP-221ENST00000619555 PLEKHH3Q7Z736 793 aa13.52□□□□□ -0.25
TARDBP-221ENST00000619555 LCORLQ8N3X6 602 aa13.52□□□□□ -0.25
TARDBP-221ENST00000619555 GTF3C2Q8WUA4 911 aaPredicted RBP13.52□□□□□ -0.25
TARDBP-221ENST00000619555 SDR42E1Q8WUS8 393 aa13.52□□□□□ -0.25
TARDBP-221ENST00000619555 SOCS4Q8WXH5 440 aa13.52□□□□□ -0.25
TARDBP-221ENST00000619555 USP6NLQ92738 828 aa13.52□□□□□ -0.25
TARDBP-221ENST00000619555 KIAA1683Q9H0B3 1180 aa13.52□□□□□ -0.25
TARDBP-221ENST00000619555 PRO3102Q9H379 93 aa13.52□□□□□ -0.25
TARDBP-221ENST00000619555 BOLA2Q9H3K6 86 aa13.52□□□□□ -0.25
TARDBP-221ENST00000619555 NAV1Q8NEY1 1877 aa13.52□□□□□ -0.25
TARDBP-221ENST00000619555 RAB11FIP3O75154 756 aa13.51□□□□□ -0.25
TARDBP-221ENST00000619555 VCAM1P19320 739 aa13.51□□□□□ -0.25
TARDBP-221ENST00000619555 MNX1P50219 401 aaPredicted RBP13.51□□□□□ -0.25
TARDBP-221ENST00000619555 CCL14Q16627 93 aa13.51□□□□□ -0.25
TARDBP-221ENST00000619555 MORN1Q5T089 497 aa13.51□□□□□ -0.25
TARDBP-221ENST00000619555 MAP3K21Q5TCX8 1036 aa13.51□□□□□ -0.25
TARDBP-221ENST00000619555 ARMT1Q9H993 441 aa13.51□□□□□ -0.25
TARDBP-221ENST00000619555 DCP1AQ9NPI6 582 aaPredicted RBP13.51□□□□□ -0.25
TARDBP-221ENST00000619555 RABGAP1Q9Y3P9 1069 aa13.51□□□□□ -0.25
TARDBP-221ENST00000619555 DDX60LQ5H9U9 1706 aaKnown RBP13.5□□□□□ -0.25
TARDBP-221ENST00000619555 A0A1W2PRG0 241 aa13.5□□□□□ -0.25
TARDBP-221ENST00000619555 MPHOSPH10O00566 681 aaKnown RBP13.5□□□□□ -0.25
TARDBP-221ENST00000619555 PRKAB2O43741 272 aa13.5□□□□□ -0.25
TARDBP-221ENST00000619555 CHGBP05060 677 aa13.5□□□□□ -0.25
TARDBP-221ENST00000619555 ZKSCAN1P17029 563 aaPredicted RBP13.5□□□□□ -0.25
TARDBP-221ENST00000619555 RGS2P41220 211 aa13.5□□□□□ -0.25
TARDBP-221ENST00000619555 RRP1P56182 461 aaKnown RBP13.5□□□□□ -0.25
TARDBP-221ENST00000619555 CACNB2Q08289 660 aaPredicted RBP13.5□□□□□ -0.25
TARDBP-221ENST00000619555 ANKLE1Q8NAG6 615 aa13.5□□□□□ -0.25
TARDBP-221ENST00000619555 SLC44A5Q8NCS7 719 aa13.5□□□□□ -0.25
TARDBP-221ENST00000619555 CWC22Q9HCG8 908 aaKnown RBP13.5□□□□□ -0.25
TARDBP-221ENST00000619555 PAG1Q9NWQ8 432 aa13.5□□□□□ -0.25
TARDBP-221ENST00000619555 BTBD7Q9P203 1132 aa13.5□□□□□ -0.25
TARDBP-221ENST00000619555 OGDHLQ9ULD0 1010 aa13.5□□□□□ -0.25
TARDBP-221ENST00000619555 SMIM22K7EJ46 135 aa13.49□□□□□ -0.25
TARDBP-221ENST00000619555 ATP5JP18859 108 aa13.49□□□□□ -0.25
TARDBP-221ENST00000619555 CCND3P30281 292 aaPredicted RBP13.49□□□□□ -0.25
TARDBP-221ENST00000619555 ADD2P35612 726 aa13.49□□□□□ -0.25
TARDBP-221ENST00000619555 MAP2K5Q13163 448 aa13.49□□□□□ -0.25
TARDBP-221ENST00000619555 WDR78Q5VTH9 848 aa13.49□□□□□ -0.25
TARDBP-221ENST00000619555 TRMT44Q8IYL2 757 aaKnown RBP13.49□□□□□ -0.25
TARDBP-221ENST00000619555 DYNLL2Q96FJ2 89 aa13.49□□□□□ -0.25
TARDBP-221ENST00000619555 NBPF3Q9H094 633 aa13.49□□□□□ -0.25
TARDBP-221ENST00000619555 RPAP3Q9H6T3 665 aaPredicted RBP13.49□□□□□ -0.25
TARDBP-221ENST00000619555 STAP2Q9UGK3 403 aa13.49□□□□□ -0.25
TARDBP-221ENST00000619555 BAZ2AQ9UIF9 1905 aaKnown RBP13.49□□□□□ -0.25
TARDBP-221ENST00000619555 SPDYE16A6NNV3 312 aaPredicted RBP13.48□□□□□ -0.25
TARDBP-221ENST00000619555 SMARCA5O60264 1052 aaPredicted RBP13.48□□□□□ -0.25
TARDBP-221ENST00000619555 MBD4O95243 580 aa13.48□□□□□ -0.25
TARDBP-221ENST00000619555 CCNA1P78396 465 aa13.48□□□□□ -0.25
TARDBP-221ENST00000619555 KIAA1755Q5JYT7 1200 aa13.48□□□□□ -0.25
TARDBP-221ENST00000619555 C7orf61Q8IZ16 206 aa13.48□□□□□ -0.25
TARDBP-221ENST00000619555 APBA2Q99767 749 aa13.48□□□□□ -0.25
TARDBP-221ENST00000619555 HAUS7Q99871 368 aa13.48□□□□□ -0.25
TARDBP-221ENST00000619555 C11orf49Q9H6J7 331 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms