RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-233ENST00000618836 DKK3Q9UBP4 350 aa4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 USP21Q9UK80 565 aa4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 LY75O60449 1722 aa4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 TBKBP1A7MCY6 615 aa4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 ZSCAN9O15535 394 aaPredicted RBP4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 SKAP2O75563 359 aaPredicted RBP4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 ARIH2O95376 493 aa4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 KRT18P05783 430 aaKnown RBP4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 SLC10A3P09131 477 aa4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 CHMLP26374 656 aa4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 USP11P51784 963 aa4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 CLCN6P51797 869 aa4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 KRT83P78385 493 aa4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 GRAMD1BQ3KR37 738 aa4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 HDGFL2Q7Z4V5 671 aaPredicted RBP4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 CCDC91Q7Z6B0 441 aa4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 RASSF3Q86WH2 238 aa4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 SNX32Q86XE0 403 aa4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 TMEM151BQ8IW70 566 aa4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 TRIML1Q8N9V2 468 aa4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 CCDC26Q8TAB7 109 aa4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 RTF1Q92541 710 aaKnown RBP4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 NUDT16Q96DE0 195 aaKnown RBP4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 NLRP3Q96P20 1036 aa4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 PPP1R12CQ9BZL4 782 aa4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 ZSWIM6Q9HCJ5 1215 aa4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 SPATA7Q9P0W8 599 aa4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 LUZP4Q9P127 313 aa4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 CCDC18Q5T9S5 1454 aa4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 PRXQ9BXM0 1461 aa4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 MYO5BQ9ULV0 1848 aa4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 hCG_1984214I3L0E3 225 aa4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 TOMM70O94826 608 aa4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 WEE1P30291 646 aa4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 GJA8P48165 433 aa4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 CSE1LP55060 971 aaKnown RBP4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 SH3BGRP55822 239 aaPredicted RBP4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 SNX16P57768 344 aa4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 ROR1Q01973 937 aa4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 GABPB1Q06547 395 aaPredicted RBP4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 TTC19Q6DKK2 380 aaPredicted RBP4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 CCDC129Q6ZRS4 1044 aa4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 NUDT18Q6ZVK8 323 aa4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 SAPCD2Q86UD0 394 aa4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 ZNF713Q8N859 430 aaPredicted RBP4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 LILRB1Q8NHL6 650 aaPredicted RBP4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 ANKRD49Q8WVL7 239 aa4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 RPGRQ92834 1020 aaKnown RBP4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 PRKRIP1Q9H875 184 aaPredicted RBP4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 PPCSQ9HAB8 311 aa4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 SENP2Q9HC62 589 aa4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 CPSF2Q9P2I0 782 aaKnown RBP4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 SEPT9Q9UHD8 586 aaPredicted RBP4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 CFAP45Q9UL16 551 aa4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 AXIN2Q9Y2T1 843 aa4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 LMO7Q8WWI1 1683 aa4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 CLTCL1P53675 1640 aa4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 MYO1BO43795 1136 aa4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 HSPA1AP0DMV8 641 aaKnown RBP4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 HSPA1BP0DMV9 641 aaKnown RBP4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 EXOSC10Q01780 885 aaKnown RBP4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 PAK2Q13177 524 aa4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 HLTFQ14527 1009 aaKnown RBP eCLIP4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 ARMC4Q5T2S8 1044 aa4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 TTLL5Q6EMB2 1281 aa4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 PRPF38AQ8NAV1 312 aaKnown RBP4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 PPHLN1Q8NEY8 458 aaKnown RBP4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 ATXN2LQ8WWM7 1075 aaKnown RBP4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 SKA1Q96BD8 255 aa4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 ASIC4Q96FT7 647 aa4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 TRMT2BQ96GJ1 504 aaKnown RBP4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 MOGAT1Q96PD6 335 aa4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 EYA1Q99502 592 aa4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 C12orf49Q9H741 205 aa4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 ZNF304Q9HCX3 659 aa4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 STAP2Q9UGK3 403 aa4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 TAGLN3Q9UI15 199 aa4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 PCDHGB3Q9Y5G1 929 aa4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 C1orf167Q5SNV9 1468 aa4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 CFAP99D6REC4 459 aa4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 M0QX08 132 aa4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 PIK3CDO00329 1044 aa4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 NEMFO60524 1076 aa4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 RWDD2BP57060 319 aa4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 CCDC122Q5T0U0 273 aa4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 FAM83BQ5T0W9 1011 aa4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 PPP4R3AQ6IN85 833 aa4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 GPR153Q6NV75 609 aa4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 RTL10Q7L3V2 364 aa4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 MILR1Q7Z6M3 343 aa4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 LURAP1LQ8IV03 231 aa4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 GSDMBQ8TAX9 411 aa4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 SRRTQ9BXP5 876 aaKnown RBP4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 PNMA8BQ9ULN7 279 aaPredicted RBP4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 LHX6Q9UPM6 363 aa4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 SPAG9O60271 1321 aaKnown RBP4.7□□□□□ -1.66
UBE2D3-233ENST00000618836 GCC2Q8IWJ2 1684 aa4.69□□□□□ -1.66
UBE2D3-233ENST00000618836 OFD1O75665 1012 aa4.69□□□□□ -1.66
UBE2D3-233ENST00000618836 USP17L8P0C7I0 530 aa4.69□□□□□ -1.66
UBE2D3-233ENST00000618836 PLA2G4AP47712 749 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms