RNA–Protein interactions for RNA: ENST00000618596.1

GPC5-204, Transcript of glypican 5, humanhuman

TSL 5 BASIC

Gene GPC5, Length 960 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC5-204ENST00000618596 IGKV6D-41A0A0C4DH26 115 aa11.32□□□□□ -0.6
GPC5-204ENST00000618596 PPFIA3O75145 1194 aa11.32□□□□□ -0.6
GPC5-204ENST00000618596 DDAH1O94760 285 aa11.32□□□□□ -0.6
GPC5-204ENST00000618596 LMOD1P29536 600 aaPredicted RBP11.32□□□□□ -0.6
GPC5-204ENST00000618596 CDC27P30260 824 aa11.32□□□□□ -0.6
GPC5-204ENST00000618596 TNNI2P48788 182 aa11.32□□□□□ -0.6
GPC5-204ENST00000618596 RCAN1P53805 252 aa11.32□□□□□ -0.6
GPC5-204ENST00000618596 HIRAP54198 1017 aaPredicted RBP11.32□□□□□ -0.6
GPC5-204ENST00000618596 RASA3Q14644 834 aa11.32□□□□□ -0.6
GPC5-204ENST00000618596 RTN1Q16799 776 aa11.32□□□□□ -0.6
GPC5-204ENST00000618596 SHROOM1Q2M3G4 852 aaPredicted RBP11.32□□□□□ -0.6
GPC5-204ENST00000618596 CCDC178Q5BJE1 867 aa11.32□□□□□ -0.6
GPC5-204ENST00000618596 CATIPQ7Z7H3 387 aa11.32□□□□□ -0.6
GPC5-204ENST00000618596 METTL16Q86W50 562 aaKnown RBP11.32□□□□□ -0.6
GPC5-204ENST00000618596 DGKHQ86XP1 1220 aa11.32□□□□□ -0.6
GPC5-204ENST00000618596 CLEC10AQ8IUN9 316 aa11.32□□□□□ -0.6
GPC5-204ENST00000618596 SMARCC2Q8TAQ2 1214 aa11.32□□□□□ -0.6
GPC5-204ENST00000618596 ANKS1AQ92625 1134 aa11.32□□□□□ -0.6
GPC5-204ENST00000618596 CEP95Q96GE4 821 aa11.32□□□□□ -0.6
GPC5-204ENST00000618596 LLPHQ9BRT6 129 aaKnown RBP11.32□□□□□ -0.6
GPC5-204ENST00000618596 KAT14Q9H8E8 782 aa11.32□□□□□ -0.6
GPC5-204ENST00000618596 FAM217BQ9NTX9 383 aaPredicted RBP11.32□□□□□ -0.6
GPC5-204ENST00000618596 TAOK2Q9UL54 1235 aa11.32□□□□□ -0.6
GPC5-204ENST00000618596 MPHOSPH10O00566 681 aaKnown RBP11.31□□□□□ -0.6
GPC5-204ENST00000618596 CPLX1O14810 134 aa11.31□□□□□ -0.6
GPC5-204ENST00000618596 GDF11O95390 407 aa11.31□□□□□ -0.6
GPC5-204ENST00000618596 ADD1P35611 737 aaKnown RBP11.31□□□□□ -0.6
GPC5-204ENST00000618596 TNFAIP1Q13829 316 aa11.31□□□□□ -0.6
GPC5-204ENST00000618596 RRP1BQ14684 758 aaKnown RBP11.31□□□□□ -0.6
GPC5-204ENST00000618596 RAB3GAP1Q15042 981 aa11.31□□□□□ -0.6
GPC5-204ENST00000618596 CERKLQ49MI3 558 aaPredicted RBP11.31□□□□□ -0.6
GPC5-204ENST00000618596 ANGEL2Q5VTE6 544 aaKnown RBP11.31□□□□□ -0.6
GPC5-204ENST00000618596 TATDN1Q6P1N9 297 aa11.31□□□□□ -0.6
GPC5-204ENST00000618596 CHMP4CQ96CF2 233 aa11.31□□□□□ -0.6
GPC5-204ENST00000618596 TEPSINQ96N21 525 aa11.31□□□□□ -0.6
GPC5-204ENST00000618596 TMEM47Q9BQJ4 181 aa11.31□□□□□ -0.6
GPC5-204ENST00000618596 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.31□□□□□ -0.6
GPC5-204ENST00000618596 GGA3Q9NZ52 723 aa11.31□□□□□ -0.6
GPC5-204ENST00000618596 HERC5Q9UII4 1024 aaKnown RBP11.31□□□□□ -0.6
GPC5-204ENST00000618596 STX8Q9UNK0 236 aa11.31□□□□□ -0.6
GPC5-204ENST00000618596 ZC3H4Q9UPT8 1303 aaKnown RBP11.31□□□□□ -0.6
GPC5-204ENST00000618596 DHX16O60231 1041 aaKnown RBP11.3□□□□□ -0.6
GPC5-204ENST00000618596 POTEIP0CG38 1075 aa11.3□□□□□ -0.6
GPC5-204ENST00000618596 NOVP48745 357 aa11.3□□□□□ -0.6
GPC5-204ENST00000618596 FOSBP53539 338 aa11.3□□□□□ -0.6
GPC5-204ENST00000618596 NUCB2P80303 420 aa11.3□□□□□ -0.6
GPC5-204ENST00000618596 TROAPQ12815 778 aa11.3□□□□□ -0.6
GPC5-204ENST00000618596 FOXD4L5Q5VV16 416 aaPredicted RBP11.3□□□□□ -0.6
GPC5-204ENST00000618596 APOBEC3FQ8IUX4 373 aaKnown RBP11.3□□□□□ -0.6
GPC5-204ENST00000618596 LRRC47Q8N1G4 583 aaKnown RBP11.3□□□□□ -0.6
GPC5-204ENST00000618596 FANCBQ8NB91 859 aa11.3□□□□□ -0.6
GPC5-204ENST00000618596 PNMA1Q8ND90 353 aa11.3□□□□□ -0.6
GPC5-204ENST00000618596 FOXD4L4Q8WXT5 416 aaPredicted RBP11.3□□□□□ -0.6
GPC5-204ENST00000618596 L3MBTL3Q96JM7 780 aaPredicted RBP11.3□□□□□ -0.6
GPC5-204ENST00000618596 CCDC17Q96LX7 622 aa11.3□□□□□ -0.6
GPC5-204ENST00000618596 ADARB2Q9NS39 739 aaKnown RBP11.3□□□□□ -0.6
GPC5-204ENST00000618596 MTMR4Q9NYA4 1195 aa11.3□□□□□ -0.6
GPC5-204ENST00000618596 ZDHHC9Q9Y397 364 aa11.3□□□□□ -0.6
GPC5-204ENST00000618596 CDKL5O76039 1030 aa11.29□□□□□ -0.6
GPC5-204ENST00000618596 BRD1O95696 1058 aa11.29□□□□□ -0.6
GPC5-204ENST00000618596 CALM1P0DP23 149 aa11.29□□□□□ -0.6
GPC5-204ENST00000618596 CALM2P0DP24 149 aa11.29□□□□□ -0.6
GPC5-204ENST00000618596 CALM3P0DP25 149 aa11.29□□□□□ -0.6
GPC5-204ENST00000618596 TOP1P11387 765 aaKnown RBP11.29□□□□□ -0.6
GPC5-204ENST00000618596 FDPSP14324 419 aaKnown RBP11.29□□□□□ -0.6
GPC5-204ENST00000618596 SYT1P21579 422 aa11.29□□□□□ -0.6
GPC5-204ENST00000618596 GUCY1A2P33402 732 aa11.29□□□□□ -0.6
GPC5-204ENST00000618596 JAG1P78504 1218 aa11.29□□□□□ -0.6
GPC5-204ENST00000618596 HMGN5P82970 282 aaKnown RBP11.29□□□□□ -0.6
GPC5-204ENST00000618596 NTRK3Q16288 839 aa11.29□□□□□ -0.6
GPC5-204ENST00000618596 ABCB5Q2M3G0 1257 aa11.29□□□□□ -0.6
GPC5-204ENST00000618596 DPY19L2Q6NUT2 758 aa11.29□□□□□ -0.6
GPC5-204ENST00000618596 CPLX2Q6PUV4 134 aaKnown RBP11.29□□□□□ -0.6
GPC5-204ENST00000618596 MIGA2Q7L4E1 593 aa11.29□□□□□ -0.6
GPC5-204ENST00000618596 RASGRP2Q7LDG7 609 aa11.29□□□□□ -0.6
GPC5-204ENST00000618596 FAM184AQ8NB25 1140 aa11.29□□□□□ -0.6
GPC5-204ENST00000618596 TNPO1Q92973 898 aaKnown RBP11.29□□□□□ -0.6
GPC5-204ENST00000618596 PHKBQ93100 1093 aa11.29□□□□□ -0.6
GPC5-204ENST00000618596 DEFB129Q9H1M3 183 aa11.29□□□□□ -0.6
GPC5-204ENST00000618596 MTMR7Q9Y216 660 aa11.29□□□□□ -0.6
GPC5-204ENST00000618596 SRCAPQ6ZRS2 3230 aa11.28□□□□□ -0.6
GPC5-204ENST00000618596 CCDC196A0A1B0GTZ2 297 aa11.28□□□□□ -0.6
GPC5-204ENST00000618596 STX6O43752 255 aa11.28□□□□□ -0.6
GPC5-204ENST00000618596 TBC1D12O60347 775 aa11.28□□□□□ -0.6
GPC5-204ENST00000618596 PLEKHA8P1O95397 391 aa11.28□□□□□ -0.6
GPC5-204ENST00000618596 GH2P01242 217 aa11.28□□□□□ -0.6
GPC5-204ENST00000618596 IFNAR1P17181 557 aa11.28□□□□□ -0.6
GPC5-204ENST00000618596 ATP2B2Q01814 1243 aa11.28□□□□□ -0.6
GPC5-204ENST00000618596 GRM4Q14833 912 aa11.28□□□□□ -0.6
GPC5-204ENST00000618596 SEPT2Q15019 361 aa11.28□□□□□ -0.6
GPC5-204ENST00000618596 LARP1BQ659C4 914 aaKnown RBP11.28□□□□□ -0.6
GPC5-204ENST00000618596 TMEM179Q6ZVK1 233 aa11.28□□□□□ -0.6
GPC5-204ENST00000618596 TMTC3Q6ZXV5 915 aa11.28□□□□□ -0.6
GPC5-204ENST00000618596 CMTR1Q8N1G2 835 aaKnown RBP11.28□□□□□ -0.6
GPC5-204ENST00000618596 CTCFLQ8NI51 663 aaPredicted RBP11.28□□□□□ -0.6
GPC5-204ENST00000618596 SLC26A6Q9BXS9 759 aa11.28□□□□□ -0.6
GPC5-204ENST00000618596 RBM28Q9NW13 759 aaKnown RBP11.28□□□□□ -0.6
GPC5-204ENST00000618596 ORC3Q9UBD5 711 aaPredicted RBP11.28□□□□□ -0.6
GPC5-204ENST00000618596 CLIP2Q9UDT6 1046 aa11.28□□□□□ -0.6
GPC5-204ENST00000618596 MTMR6Q9Y217 621 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms