RNA–Protein interactions for RNA: ENST00000618449.4

CPEB1-216, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-216ENST00000618449 CALM2P0DP24 149 aa13.05□□□□□ -0.32
CPEB1-216ENST00000618449 CALM3P0DP25 149 aa13.05□□□□□ -0.32
CPEB1-216ENST00000618449 GUCY1A2P33402 732 aa13.05□□□□□ -0.32
CPEB1-216ENST00000618449 DGKHQ86XP1 1220 aa13.05□□□□□ -0.32
CPEB1-216ENST00000618449 SGIP1Q9BQI5 828 aa13.05□□□□□ -0.32
CPEB1-216ENST00000618449 SERPINA10Q9UK55 444 aa13.05□□□□□ -0.32
CPEB1-216ENST00000618449 PSDA5PKW4 1024 aaPredicted RBP13.04□□□□□ -0.32
CPEB1-216ENST00000618449 MAP3K11Q16584 847 aa13.04□□□□□ -0.32
CPEB1-216ENST00000618449 DALRD3Q5D0E6 543 aaKnown RBP13.04□□□□□ -0.32
CPEB1-216ENST00000618449 SOGA3Q5TF21 947 aa13.04□□□□□ -0.32
CPEB1-216ENST00000618449 TRIM22Q8IYM9 498 aa13.04□□□□□ -0.32
CPEB1-216ENST00000618449 OSBPL5Q9H0X9 879 aaPredicted RBP13.04□□□□□ -0.32
CPEB1-216ENST00000618449 TCP11L1Q9NUJ3 509 aa13.04□□□□□ -0.32
CPEB1-216ENST00000618449 DDX19AQ9NUU7 478 aaKnown RBP13.04□□□□□ -0.32
CPEB1-216ENST00000618449 NOL7Q9UMY1 257 aaKnown RBP13.04□□□□□ -0.32
CPEB1-216ENST00000618449 CCDC192P0DO97 292 aa13.04□□□□□ -0.32
CPEB1-216ENST00000618449 CACNB3P54284 484 aa13.04□□□□□ -0.32
CPEB1-216ENST00000618449 KRT40Q6A162 431 aa13.04□□□□□ -0.32
CPEB1-216ENST00000618449 RGS22Q8NE09 1264 aa13.04□□□□□ -0.32
CPEB1-216ENST00000618449 ANKS1AQ92625 1134 aa13.04□□□□□ -0.32
CPEB1-216ENST00000618449 PGBD1Q96JS3 809 aa13.04□□□□□ -0.32
CPEB1-216ENST00000618449 DACT1Q9NYF0 836 aa13.04□□□□□ -0.32
CPEB1-216ENST00000618449 CFAP45Q9UL16 551 aa13.04□□□□□ -0.32
CPEB1-216ENST00000618449 KIF28PB7ZC32 967 aa13.03□□□□□ -0.32
CPEB1-216ENST00000618449 RAD17O75943 681 aa13.03□□□□□ -0.32
CPEB1-216ENST00000618449 PLEKHA8P1O95397 391 aa13.03□□□□□ -0.32
CPEB1-216ENST00000618449 GABPAQ06546 454 aa13.03□□□□□ -0.32
CPEB1-216ENST00000618449 BICD2Q8TD16 824 aa13.03□□□□□ -0.32
CPEB1-216ENST00000618449 KAT14Q9H8E8 782 aa13.03□□□□□ -0.32
CPEB1-216ENST00000618449 RBM28Q9NW13 759 aaKnown RBP13.03□□□□□ -0.32
CPEB1-216ENST00000618449 USP25Q9UHP3 1055 aa13.03□□□□□ -0.32
CPEB1-216ENST00000618449 DEXIO95424 95 aa13.03□□□□□ -0.32
CPEB1-216ENST00000618449 KIF23Q02241 960 aaPredicted RBP13.03□□□□□ -0.32
CPEB1-216ENST00000618449 CEBPZQ03701 1054 aaKnown RBP13.03□□□□□ -0.32
CPEB1-216ENST00000618449 FUT2Q10981 343 aa13.03□□□□□ -0.32
CPEB1-216ENST00000618449 ZFPM1Q8IX07 1006 aa13.03□□□□□ -0.32
CPEB1-216ENST00000618449 WASF1Q92558 559 aa13.03□□□□□ -0.32
CPEB1-216ENST00000618449 FTOQ9C0B1 505 aaKnown RBP eCLIP13.03□□□□□ -0.32
CPEB1-216ENST00000618449 VPS33BQ9H267 617 aa13.03□□□□□ -0.32
CPEB1-216ENST00000618449 STX8Q9UNK0 236 aa13.03□□□□□ -0.32
CPEB1-216ENST00000618449 PSMD14O00487 310 aa13.02□□□□□ -0.32
CPEB1-216ENST00000618449 CCDC178Q5BJE1 867 aa13.02□□□□□ -0.32
CPEB1-216ENST00000618449 RSBN1LQ6PCB5 846 aaPredicted RBP13.02□□□□□ -0.32
CPEB1-216ENST00000618449 PNMA1Q8ND90 353 aa13.02□□□□□ -0.32
CPEB1-216ENST00000618449 NEDD1Q8NHV4 660 aa13.02□□□□□ -0.32
CPEB1-216ENST00000618449 CTCFLQ8NI51 663 aaPredicted RBP13.02□□□□□ -0.32
CPEB1-216ENST00000618449 USP28Q96RU2 1077 aa13.02□□□□□ -0.32
CPEB1-216ENST00000618449 RNF26Q9BY78 433 aaPredicted RBP13.02□□□□□ -0.32
CPEB1-216ENST00000618449 TNMDQ9H2S6 317 aa13.02□□□□□ -0.32
CPEB1-216ENST00000618449 CLSTN2Q9H4D0 955 aa13.02□□□□□ -0.32
CPEB1-216ENST00000618449 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.02□□□□□ -0.32
CPEB1-216ENST00000618449 ZKSCAN5Q9Y2L8 839 aa13.02□□□□□ -0.32
CPEB1-216ENST00000618449 PTMAP06454 111 aaKnown RBP13.02□□□□□ -0.33
CPEB1-216ENST00000618449 VIL1P09327 827 aaKnown RBP13.02□□□□□ -0.33
CPEB1-216ENST00000618449 TRIM29Q14134 588 aa13.02□□□□□ -0.33
CPEB1-216ENST00000618449 CAMK4Q16566 473 aa13.02□□□□□ -0.33
CPEB1-216ENST00000618449 CFAP100Q494V2 611 aa13.02□□□□□ -0.33
CPEB1-216ENST00000618449 TMTC3Q6ZXV5 915 aa13.02□□□□□ -0.33
CPEB1-216ENST00000618449 IDI2Q9BXS1 227 aa13.02□□□□□ -0.33
CPEB1-216ENST00000618449 SERPINB13Q9UIV8 391 aa13.02□□□□□ -0.33
CPEB1-216ENST00000618449 PSME4Q14997 1843 aa13.02□□□□□ -0.33
CPEB1-216ENST00000618449 BRCA1P38398 1863 aaKnown RBP13.01□□□□□ -0.33
CPEB1-216ENST00000618449 PTGER2P43116 358 aa13.01□□□□□ -0.33
CPEB1-216ENST00000618449 TCP10Q12799 353 aa13.01□□□□□ -0.33
CPEB1-216ENST00000618449 ATL3Q6DD88 541 aa13.01□□□□□ -0.33
CPEB1-216ENST00000618449 ZNF396Q96N95 335 aaPredicted RBP13.01□□□□□ -0.33
CPEB1-216ENST00000618449 TMEM47Q9BQJ4 181 aa13.01□□□□□ -0.33
CPEB1-216ENST00000618449 FAM198AQ9UFP1 575 aa13.01□□□□□ -0.33
CPEB1-216ENST00000618449 ZNRF3Q9ULT6 936 aa13.01□□□□□ -0.33
CPEB1-216ENST00000618449 CD2APQ9Y5K6 639 aa13.01□□□□□ -0.33
CPEB1-216ENST00000618449 MYO3BQ8WXR4 1341 aa13.01□□□□□ -0.33
CPEB1-216ENST00000618449 hCG_1642624A0A1W2PR95 340 aa13.01□□□□□ -0.33
CPEB1-216ENST00000618449 NR1I2O75469 434 aa13.01□□□□□ -0.33
CPEB1-216ENST00000618449 TYRO3Q06418 890 aa13.01□□□□□ -0.33
CPEB1-216ENST00000618449 RBM43Q6ZSC3 357 aaKnown RBP13.01□□□□□ -0.33
CPEB1-216ENST00000618449 BRAPQ7Z569 592 aa13.01□□□□□ -0.33
CPEB1-216ENST00000618449 NIM1KQ8IY84 436 aa13.01□□□□□ -0.33
CPEB1-216ENST00000618449 SRBD1Q8N5C6 995 aaKnown RBP13.01□□□□□ -0.33
CPEB1-216ENST00000618449 PRMT6Q96LA8 375 aaPredicted RBP13.01□□□□□ -0.33
CPEB1-216ENST00000618449 GMLQ99445 158 aa13.01□□□□□ -0.33
CPEB1-216ENST00000618449 TDRD3Q9H7E2 651 aaKnown RBP13.01□□□□□ -0.33
CPEB1-216ENST00000618449 ZBTB12Q9Y330 459 aaPredicted RBP13.01□□□□□ -0.33
CPEB1-216ENST00000618449 V9GY48 417 aaPredicted RBP13.01□□□□□ -0.33
CPEB1-216ENST00000618449 PRPF3O43395 683 aaKnown RBP13□□□□□ -0.33
CPEB1-216ENST00000618449 ADCY5O95622 1261 aa13□□□□□ -0.33
CPEB1-216ENST00000618449 HLA-DOAP06340 250 aa13□□□□□ -0.33
CPEB1-216ENST00000618449 SLURP2P0DP57 97 aa13□□□□□ -0.33
CPEB1-216ENST00000618449 AKAP17AQ02040 695 aaKnown RBP13□□□□□ -0.33
CPEB1-216ENST00000618449 PKN1Q16512 942 aa13□□□□□ -0.33
CPEB1-216ENST00000618449 MYSM1Q5VVJ2 828 aa13□□□□□ -0.33
CPEB1-216ENST00000618449 CEP95Q96GE4 821 aa13□□□□□ -0.33
CPEB1-216ENST00000618449 GNL3Q9BVP2 549 aaKnown RBP eCLIP13□□□□□ -0.33
CPEB1-216ENST00000618449 TAOK3Q9H2K8 898 aa13□□□□□ -0.33
CPEB1-216ENST00000618449 RCOR1Q9UKL0 485 aa13□□□□□ -0.33
CPEB1-216ENST00000618449 UTRNP46939 3433 aa13□□□□□ -0.33
CPEB1-216ENST00000618449 DDTLA6NHG4 134 aaPredicted RBP13□□□□□ -0.33
CPEB1-216ENST00000618449 CKAP2LQ8IYA6 745 aa13□□□□□ -0.33
CPEB1-216ENST00000618449 SWAP70Q9UH65 585 aa13□□□□□ -0.33
CPEB1-216ENST00000618449 KCNJ14Q9UNX9 436 aa13□□□□□ -0.33
CPEB1-216ENST00000618449 BCS1LQ9Y276 419 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms