RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 TRIM73Q86UV7 250 aa13.89□□□□□ -0.19
SRRT-216ENST00000618262 CDAN1Q8IWY9 1227 aa13.89□□□□□ -0.19
SRRT-216ENST00000618262 USP40Q9NVE5 1235 aa13.89□□□□□ -0.19
SRRT-216ENST00000618262 CHCHD3Q9NX63 227 aaKnown RBP13.89□□□□□ -0.19
SRRT-216ENST00000618262 CENPFP49454 3210 aa13.88□□□□□ -0.19
SRRT-216ENST00000618262 ANKRD33BA6NCL7 494 aa13.88□□□□□ -0.19
SRRT-216ENST00000618262 USP5P45974 858 aa13.88□□□□□ -0.19
SRRT-216ENST00000618262 TBC1D22AQ8WUA7 517 aa13.88□□□□□ -0.19
SRRT-216ENST00000618262 C22orf23Q9BZE7 217 aa13.88□□□□□ -0.19
SRRT-216ENST00000618262 UPF3BQ9BZI7 483 aaKnown RBP13.88□□□□□ -0.19
SRRT-216ENST00000618262 CCDC171Q6TFL3 1326 aa13.88□□□□□ -0.19
SRRT-216ENST00000618262 CTDSPL2Q05D32 466 aa13.88□□□□□ -0.19
SRRT-216ENST00000618262 EAPPQ56P03 285 aaPredicted RBP13.88□□□□□ -0.19
SRRT-216ENST00000618262 ZSCAN29Q8IWY8 852 aaPredicted RBP13.88□□□□□ -0.19
SRRT-216ENST00000618262 RASEFQ8IZ41 740 aa13.88□□□□□ -0.19
SRRT-216ENST00000618262 RUFY2Q8WXA3 655 aa13.88□□□□□ -0.19
SRRT-216ENST00000618262 TEKT1Q969V4 418 aa13.88□□□□□ -0.19
SRRT-216ENST00000618262 STRBPQ96SI9 672 aaKnown RBP13.88□□□□□ -0.19
SRRT-216ENST00000618262 CCDC88AQ3V6T2 1871 aa13.87□□□□□ -0.19
SRRT-216ENST00000618262 FAM205AQ6ZU69 1335 aa13.87□□□□□ -0.19
SRRT-216ENST00000618262 FOXP2O15409 715 aa13.87□□□□□ -0.19
SRRT-216ENST00000618262 RRP12Q5JTH9 1297 aaKnown RBP13.87□□□□□ -0.19
SRRT-216ENST00000618262 TTC19Q6DKK2 380 aaPredicted RBP13.87□□□□□ -0.19
SRRT-216ENST00000618262 ZSCAN25Q6NSZ9 544 aa13.87□□□□□ -0.19
SRRT-216ENST00000618262 RBM8AQ9Y5S9 174 aaKnown RBP13.87□□□□□ -0.19
SRRT-216ENST00000618262 FZD9O00144 591 aa13.87□□□□□ -0.19
SRRT-216ENST00000618262 FGAP02671 866 aa13.87□□□□□ -0.19
SRRT-216ENST00000618262 VIL1P09327 827 aaKnown RBP13.87□□□□□ -0.19
SRRT-216ENST00000618262 SETSIPP0DME0 302 aa13.87□□□□□ -0.19
SRRT-216ENST00000618262 PRKG1Q13976 671 aa13.87□□□□□ -0.19
SRRT-216ENST00000618262 TEX11Q8IYF3 940 aa13.87□□□□□ -0.19
SRRT-216ENST00000618262 ZGPATQ8N5A5 531 aaKnown RBP13.87□□□□□ -0.19
SRRT-216ENST00000618262 LRRC2Q9BYS8 371 aa13.87□□□□□ -0.19
SRRT-216ENST00000618262 SYNPO2Q9UMS6 1093 aa13.87□□□□□ -0.19
SRRT-216ENST00000618262 UBE3CQ15386 1083 aa13.86□□□□□ -0.19
SRRT-216ENST00000618262 NKX2-3Q8TAU0 364 aa13.86□□□□□ -0.19
SRRT-216ENST00000618262 TRPM4Q8TD43 1214 aa13.86□□□□□ -0.19
SRRT-216ENST00000618262 RIOK1Q9BRS2 568 aaKnown RBP13.86□□□□□ -0.19
SRRT-216ENST00000618262 LSG1Q9H089 658 aaKnown RBP13.86□□□□□ -0.19
SRRT-216ENST00000618262 EPB41L4AQ9HCS5 686 aaPredicted RBP13.86□□□□□ -0.19
SRRT-216ENST00000618262 MCM9Q9NXL9 1143 aa13.86□□□□□ -0.19
SRRT-216ENST00000618262 BIN2Q9UBW5 565 aaPredicted RBP13.86□□□□□ -0.19
SRRT-216ENST00000618262 POTEIP0CG38 1075 aa13.86□□□□□ -0.19
SRRT-216ENST00000618262 POTEJP0CG39 1038 aa13.86□□□□□ -0.19
SRRT-216ENST00000618262 APOBEC3HQ6NTF7 200 aaKnown RBP13.86□□□□□ -0.19
SRRT-216ENST00000618262 MAMSTRQ6ZN01 415 aa13.86□□□□□ -0.19
SRRT-216ENST00000618262 C10orf67Q8IYJ2 551 aa13.86□□□□□ -0.19
SRRT-216ENST00000618262 USP26Q9BXU7 913 aa13.86□□□□□ -0.19
SRRT-216ENST00000618262 DDX4Q9NQI0 724 aaKnown RBP13.86□□□□□ -0.19
SRRT-216ENST00000618262 ADAMTSL1Q8N6G6 1762 aa13.86□□□□□ -0.19
SRRT-216ENST00000618262 AK9Q5TCS8 1911 aa13.86□□□□□ -0.19
SRRT-216ENST00000618262 MROH7-TTC4A0A0A0MT08 1334 aa13.86□□□□□ -0.19
SRRT-216ENST00000618262 OATP04181 439 aa13.86□□□□□ -0.19
SRRT-216ENST00000618262 DLGAP5Q15398 846 aa13.86□□□□□ -0.19
SRRT-216ENST00000618262 ADCK5Q3MIX3 580 aa13.86□□□□□ -0.19
SRRT-216ENST00000618262 CDC42EP5Q6NZY7 148 aa13.86□□□□□ -0.19
SRRT-216ENST00000618262 TNIP1Q15025 636 aa13.85□□□□□ -0.19
SRRT-216ENST00000618262 SLC44A5Q8NCS7 719 aa13.85□□□□□ -0.19
SRRT-216ENST00000618262 MICAL1Q8TDZ2 1067 aa13.85□□□□□ -0.19
SRRT-216ENST00000618262 DYNLL2Q96FJ2 89 aa13.85□□□□□ -0.19
SRRT-216ENST00000618262 NAPBQ9H115 298 aa13.85□□□□□ -0.19
SRRT-216ENST00000618262 ETAA1Q9NY74 926 aa13.85□□□□□ -0.19
SRRT-216ENST00000618262 DDX41Q9UJV9 622 aaKnown RBP13.85□□□□□ -0.19
SRRT-216ENST00000618262 USP17L12C9JPN9 530 aa13.85□□□□□ -0.19
SRRT-216ENST00000618262 USP17L21D6R901 530 aa13.85□□□□□ -0.19
SRRT-216ENST00000618262 GRIN3BO60391 1043 aa13.85□□□□□ -0.19
SRRT-216ENST00000618262 REC8O95072 547 aa13.85□□□□□ -0.19
SRRT-216ENST00000618262 ZFYP08048 801 aaPredicted RBP13.85□□□□□ -0.19
SRRT-216ENST00000618262 C16orf87Q6PH81 154 aa13.85□□□□□ -0.19
SRRT-216ENST00000618262 MYOZ2Q9NPC6 264 aa13.85□□□□□ -0.19
SRRT-216ENST00000618262 MORC2Q9Y6X9 1032 aaPredicted RBP13.85□□□□□ -0.19
SRRT-216ENST00000618262 GSG1L2A8MUP6 293 aa13.84□□□□□ -0.19
SRRT-216ENST00000618262 HIP1O00291 1037 aa13.84□□□□□ -0.19
SRRT-216ENST00000618262 PPFIA3O75145 1194 aa13.84□□□□□ -0.19
SRRT-216ENST00000618262 MAP2K2P36507 400 aa13.84□□□□□ -0.19
SRRT-216ENST00000618262 FER1L6Q2WGJ9 1857 aa13.84□□□□□ -0.19
SRRT-216ENST00000618262 HELLSQ9NRZ9 838 aa13.84□□□□□ -0.19
SRRT-216ENST00000618262 WNT10BO00744 389 aa13.84□□□□□ -0.19
SRRT-216ENST00000618262 LRRFIP1Q32MZ4 808 aaKnown RBP13.84□□□□□ -0.19
SRRT-216ENST00000618262 IFNL3Q8IZI9 196 aa13.84□□□□□ -0.19
SRRT-216ENST00000618262 KRT222Q8N1A0 295 aa13.84□□□□□ -0.19
SRRT-216ENST00000618262 ARHGEF10LQ9HCE6 1279 aa13.84□□□□□ -0.19
SRRT-216ENST00000618262 CCDC39Q9UFE4 941 aa13.84□□□□□ -0.19
SRRT-216ENST00000618262 ARAP2Q8WZ64 1704 aa13.84□□□□□ -0.19
SRRT-216ENST00000618262 KINO60870 393 aaKnown RBP13.83□□□□□ -0.19
SRRT-216ENST00000618262 PPFIA2O75334 1257 aa13.83□□□□□ -0.19
SRRT-216ENST00000618262 CYP21A2P08686 494 aa13.83□□□□□ -0.19
SRRT-216ENST00000618262 PLCD1P51178 756 aa13.83□□□□□ -0.19
SRRT-216ENST00000618262 FMR1Q06787 632 aaKnown RBP eCLIP13.83□□□□□ -0.194e-6■■□□□ 11.9
SRRT-216ENST00000618262 MIGA2Q7L4E1 593 aa13.83□□□□□ -0.19
SRRT-216ENST00000618262 PHC3Q8NDX5 983 aa13.83□□□□□ -0.19
SRRT-216ENST00000618262 ANKRD20A12PQ8NF67 263 aa13.83□□□□□ -0.19
SRRT-216ENST00000618262 ZKSCAN3Q9BRR0 538 aa13.83□□□□□ -0.19
SRRT-216ENST00000618262 DCAF8L1A6NGE4 600 aa13.83□□□□□ -0.2
SRRT-216ENST00000618262 MYO1CO00159 1063 aa13.83□□□□□ -0.2
SRRT-216ENST00000618262 SH3BP5O60239 455 aa13.83□□□□□ -0.2
SRRT-216ENST00000618262 BAG3O95817 575 aa13.83□□□□□ -0.2
SRRT-216ENST00000618262 NOLC1Q14978 699 aaKnown RBP eCLIP13.83□□□□□ -0.2
SRRT-216ENST00000618262 RAB11FIP4Q86YS3 637 aa13.83□□□□□ -0.2
SRRT-216ENST00000618262 TMEM39BQ9GZU3 492 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms