RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 LAMB1P07942 1786 aa23.94■■□□□ 1.42
SDHA-220ENST00000617470 TRAF5O00463 557 aa23.93■■□□□ 1.42
SDHA-220ENST00000617470 TMEM87AQ8NBN3 555 aa23.93■■□□□ 1.42
SDHA-220ENST00000617470 EHD4Q9H223 541 aa23.93■■□□□ 1.42
SDHA-220ENST00000617470 CDK8P49336 464 aa23.92■■□□□ 1.42
SDHA-220ENST00000617470 PRKG1Q13976 671 aa23.92■■□□□ 1.42
SDHA-220ENST00000617470 C16orf86Q6ZW13 317 aa23.92■■□□□ 1.42
SDHA-220ENST00000617470 HOOK2Q96ED9 719 aa23.92■■□□□ 1.42
SDHA-220ENST00000617470 RNF41Q9H4P4 317 aaPredicted RBP23.92■■□□□ 1.42
SDHA-220ENST00000617470 KDM4AO75164 1064 aa23.92■■□□□ 1.42
SDHA-220ENST00000617470 CNNM2Q9H8M5 875 aa23.92■■□□□ 1.42
SDHA-220ENST00000617470 ZNF408Q9H9D4 720 aa23.92■■□□□ 1.42
SDHA-220ENST00000617470 HERC5Q9UII4 1024 aaKnown RBP23.92■■□□□ 1.42
SDHA-220ENST00000617470 ROBO3Q96MS0 1386 aa23.91■■□□□ 1.42
SDHA-220ENST00000617470 FSD2A1L4K1 749 aa23.91■■□□□ 1.42
SDHA-220ENST00000617470 GOLGA8BA8MQT2 603 aa23.91■■□□□ 1.42
SDHA-220ENST00000617470 NF2P35240 595 aa23.91■■□□□ 1.42
SDHA-220ENST00000617470 GABPAQ06546 454 aa23.91■■□□□ 1.42
SDHA-220ENST00000617470 FMR1Q06787 632 aaKnown RBP eCLIP23.91■■□□□ 1.421e-7■■■□□ 16.8
SDHA-220ENST00000617470 FERMT3Q86UX7 667 aa23.91■■□□□ 1.42
SDHA-220ENST00000617470 TMEM87BQ96K49 555 aa23.91■■□□□ 1.42
SDHA-220ENST00000617470 DNAJC18Q9H819 358 aa23.91■■□□□ 1.42
SDHA-220ENST00000617470 LY9Q9HBG7 655 aa23.91■■□□□ 1.42
SDHA-220ENST00000617470 ZNF287Q9HBT7 754 aa23.91■■□□□ 1.42
SDHA-220ENST00000617470 ATP6V1DQ9Y5K8 247 aa23.91■■□□□ 1.42
SDHA-220ENST00000617470 FDPSP14324 419 aaKnown RBP23.91■■□□□ 1.42
SDHA-220ENST00000617470 DNM1Q05193 864 aaKnown RBP23.91■■□□□ 1.42
SDHA-220ENST00000617470 RAB11FIP4Q86YS3 637 aa23.91■■□□□ 1.42
SDHA-220ENST00000617470 KRT23Q9C075 422 aa23.91■■□□□ 1.42
SDHA-220ENST00000617470 SWAP70Q9UH65 585 aa23.91■■□□□ 1.42
SDHA-220ENST00000617470 FZD1Q9UP38 647 aa23.91■■□□□ 1.42
SDHA-220ENST00000617470 PPFIA3O75145 1194 aa23.9■■□□□ 1.42
SDHA-220ENST00000617470 GADD45BO75293 160 aaPredicted RBP23.9■■□□□ 1.42
SDHA-220ENST00000617470 HMGN5P82970 282 aaKnown RBP23.9■■□□□ 1.42
SDHA-220ENST00000617470 DCAF15Q66K64 600 aa23.9■■□□□ 1.42
SDHA-220ENST00000617470 SIPA1L1O43166 1804 aa23.89■■□□□ 1.41
SDHA-220ENST00000617470 RANBP6O60518 1105 aaKnown RBP23.89■■□□□ 1.41
SDHA-220ENST00000617470 SHMT1P34896 483 aa23.89■■□□□ 1.41
SDHA-220ENST00000617470 SGMS1Q86VZ5 419 aa23.89■■□□□ 1.41
SDHA-220ENST00000617470 ZNF444Q8N0Y2 327 aaPredicted RBP23.89■■□□□ 1.41
SDHA-220ENST00000617470 TBC1D12O60347 775 aa23.88■■□□□ 1.41
SDHA-220ENST00000617470 TTLL12Q14166 644 aaPredicted RBP23.88■■□□□ 1.41
SDHA-220ENST00000617470 FAM173BQ6P4H8 233 aa23.88■■□□□ 1.41
SDHA-220ENST00000617470 METTL16Q86W50 562 aaKnown RBP23.88■■□□□ 1.41
SDHA-220ENST00000617470 FAM184AQ8NB25 1140 aa23.88■■□□□ 1.41
SDHA-220ENST00000617470 NCLP19338 710 aaKnown RBP23.87■■□□□ 1.41
SDHA-220ENST00000617470 LIFRP42702 1097 aa23.87■■□□□ 1.41
SDHA-220ENST00000617470 TMEM67Q5HYA8 995 aa23.87■■□□□ 1.41
SDHA-220ENST00000617470 CAVIN1Q6NZI2 390 aaKnown RBP23.87■■□□□ 1.41
SDHA-220ENST00000617470 APOA5Q6Q788 366 aa23.87■■□□□ 1.41
SDHA-220ENST00000617470 SMC1BQ8NDV3 1235 aa23.87■■□□□ 1.41
SDHA-220ENST00000617470 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.87■■□□□ 1.41
SDHA-220ENST00000617470 SSC5DA1L4H1 1573 aa23.87■■□□□ 1.41
SDHA-220ENST00000617470 PPP1R12BO60237 982 aaPredicted RBP23.87■■□□□ 1.41
SDHA-220ENST00000617470 PCP11498 1178 aaKnown RBP23.87■■□□□ 1.41
SDHA-220ENST00000617470 CERKLQ49MI3 558 aaPredicted RBP23.87■■□□□ 1.41
SDHA-220ENST00000617470 CHMP4CQ96CF2 233 aa23.87■■□□□ 1.41
SDHA-220ENST00000617470 ZNF341Q9BYN7 854 aa23.87■■□□□ 1.41
SDHA-220ENST00000617470 RBM27Q9P2N5 1060 aaKnown RBP23.87■■□□□ 1.41
SDHA-220ENST00000617470 MPHOSPH10O00566 681 aaKnown RBP23.86■■□□□ 1.41
SDHA-220ENST00000617470 TOMM70O94826 608 aa23.86■■□□□ 1.41
SDHA-220ENST00000617470 RESTQ13127 1097 aa23.86■■□□□ 1.41
SDHA-220ENST00000617470 FAM47AQ5JRC9 791 aa23.86■■□□□ 1.41
SDHA-220ENST00000617470 TSPY2A6NKD2 308 aa23.85■■□□□ 1.41
SDHA-220ENST00000617470 IFIT3O14879 490 aaKnown RBP23.85■■□□□ 1.41
SDHA-220ENST00000617470 ORC4O43929 436 aa23.85■■□□□ 1.41
SDHA-220ENST00000617470 GDF11O95390 407 aa23.85■■□□□ 1.41
SDHA-220ENST00000617470 ITGBL1O95965 494 aaPredicted RBP23.85■■□□□ 1.41
SDHA-220ENST00000617470 FGRP09769 529 aa23.85■■□□□ 1.41
SDHA-220ENST00000617470 RASA1P20936 1047 aa23.85■■□□□ 1.41
SDHA-220ENST00000617470 GAS2L3Q86XJ1 694 aa23.85■■□□□ 1.41
SDHA-220ENST00000617470 ESR2Q92731 530 aa23.85■■□□□ 1.41
SDHA-220ENST00000617470 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.85■■□□□ 1.41
SDHA-220ENST00000617470 FIBPO43427 364 aa23.85■■□□□ 1.41
SDHA-220ENST00000617470 MBD3O95983 291 aa23.85■■□□□ 1.41
SDHA-220ENST00000617470 MAP3K10Q02779 954 aa23.85■■□□□ 1.41
SDHA-220ENST00000617470 TATDN1Q6P1N9 297 aa23.85■■□□□ 1.41
SDHA-220ENST00000617470 WRNIP1Q96S55 665 aa23.85■■□□□ 1.41
SDHA-220ENST00000617470 ZKSCAN3Q9BRR0 538 aa23.85■■□□□ 1.41
SDHA-220ENST00000617470 TMEM63CQ9P1W3 806 aa23.85■■□□□ 1.41
SDHA-220ENST00000617470 CELF2O95319 508 aaKnown RBP23.84■■□□□ 1.41
SDHA-220ENST00000617470 TSPY3P0CV98 308 aa23.84■■□□□ 1.41
SDHA-220ENST00000617470 TSPY8P0CW00 308 aa23.84■■□□□ 1.41
SDHA-220ENST00000617470 RXRAP19793 462 aa23.84■■□□□ 1.41
SDHA-220ENST00000617470 TFAP4Q01664 338 aa23.84■■□□□ 1.41
SDHA-220ENST00000617470 FAM217BQ9NTX9 383 aaPredicted RBP23.84■■□□□ 1.41
SDHA-220ENST00000617470 TAOK2Q9UL54 1235 aa23.84■■□□□ 1.41
SDHA-220ENST00000617470 DHX16O60231 1041 aaKnown RBP23.83■■□□□ 1.41
SDHA-220ENST00000617470 AKR1B1P15121 316 aa23.83■■□□□ 1.41
SDHA-220ENST00000617470 CDC27P30260 824 aa23.83■■□□□ 1.41
SDHA-220ENST00000617470 ADD1P35611 737 aaKnown RBP23.83■■□□□ 1.41
SDHA-220ENST00000617470 RBM46Q8TBY0 533 aaKnown RBP23.83■■□□□ 1.41
SDHA-220ENST00000617470 MTA3Q9BTC8 594 aa23.83■■□□□ 1.41
SDHA-220ENST00000617470 H3BQV1 296 aa23.83■■□□□ 1.41
SDHA-220ENST00000617470 USP2O75604 605 aaPredicted RBP23.83■■□□□ 1.41
SDHA-220ENST00000617470 METAP2P50579 478 aaKnown RBP eCLIP23.83■■□□□ 1.413e-6■■■■□ 25.7
SDHA-220ENST00000617470 FOSBP53539 338 aa23.83■■□□□ 1.41
SDHA-220ENST00000617470 RRP1BQ14684 758 aaKnown RBP23.83■■□□□ 1.41
SDHA-220ENST00000617470 ZSCAN23Q3MJ62 389 aa23.83■■□□□ 1.41
SDHA-220ENST00000617470 IFFO2Q5TF58 517 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms