RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.92■■□□□ 1.42
CNTNAP3B-212ENST00000617422 PPP2R5BQ15173 497 aa23.91■■□□□ 1.42
CNTNAP3B-212ENST00000617422 PKN1Q16512 942 aa23.91■■□□□ 1.42
CNTNAP3B-212ENST00000617422 TMTC3Q6ZXV5 915 aa23.91■■□□□ 1.42
CNTNAP3B-212ENST00000617422 SRBD1Q8N5C6 995 aaKnown RBP23.91■■□□□ 1.42
CNTNAP3B-212ENST00000617422 FAM198AQ9UFP1 575 aa23.91■■□□□ 1.42
CNTNAP3B-212ENST00000617422 SERPINA10Q9UK55 444 aa23.91■■□□□ 1.42
CNTNAP3B-212ENST00000617422 CALM1P0DP23 149 aa23.91■■□□□ 1.42
CNTNAP3B-212ENST00000617422 CALM2P0DP24 149 aa23.91■■□□□ 1.42
CNTNAP3B-212ENST00000617422 CALM3P0DP25 149 aa23.91■■□□□ 1.42
CNTNAP3B-212ENST00000617422 TRIM22Q8IYM9 498 aa23.91■■□□□ 1.42
CNTNAP3B-212ENST00000617422 PSMD14O00487 310 aa23.9■■□□□ 1.42
CNTNAP3B-212ENST00000617422 DEXIO95424 95 aa23.9■■□□□ 1.42
CNTNAP3B-212ENST00000617422 NT5C2P49902 561 aa23.9■■□□□ 1.42
CNTNAP3B-212ENST00000617422 RASGRP2Q7LDG7 609 aa23.9■■□□□ 1.42
CNTNAP3B-212ENST00000617422 PNMA1Q8ND90 353 aa23.9■■□□□ 1.42
CNTNAP3B-212ENST00000617422 RGS22Q8NE09 1264 aa23.9■■□□□ 1.42
CNTNAP3B-212ENST00000617422 NEDD1Q8NHV4 660 aa23.9■■□□□ 1.42
CNTNAP3B-212ENST00000617422 KCNJ14Q9UNX9 436 aa23.9■■□□□ 1.42
CNTNAP3B-212ENST00000617422 FER1L6Q2WGJ9 1857 aa23.9■■□□□ 1.42
CNTNAP3B-212ENST00000617422 MYH8P13535 1937 aa23.89■■□□□ 1.42
CNTNAP3B-212ENST00000617422 TMEM47Q9BQJ4 181 aa23.89■■□□□ 1.42
CNTNAP3B-212ENST00000617422 RNF26Q9BY78 433 aaPredicted RBP23.89■■□□□ 1.42
CNTNAP3B-212ENST00000617422 KAT14Q9H8E8 782 aa23.89■■□□□ 1.42
CNTNAP3B-212ENST00000617422 RBM28Q9NW13 759 aaKnown RBP23.89■■□□□ 1.42
CNTNAP3B-212ENST00000617422 CFAP45Q9UL16 551 aa23.89■■□□□ 1.42
CNTNAP3B-212ENST00000617422 CNTNAP5Q8WYK1 1306 aa23.89■■□□□ 1.41
CNTNAP3B-212ENST00000617422 SYCE3A1L190 88 aa23.89■■□□□ 1.41
CNTNAP3B-212ENST00000617422 PTGER2P43116 358 aa23.89■■□□□ 1.41
CNTNAP3B-212ENST00000617422 TCP10Q12799 353 aa23.89■■□□□ 1.41
CNTNAP3B-212ENST00000617422 DALRD3Q5D0E6 543 aaKnown RBP23.89■■□□□ 1.41
CNTNAP3B-212ENST00000617422 PRMT6Q96LA8 375 aaPredicted RBP23.89■■□□□ 1.41
CNTNAP3B-212ENST00000617422 GMLQ99445 158 aa23.89■■□□□ 1.41
CNTNAP3B-212ENST00000617422 ZNF287Q9HBT7 754 aa23.89■■□□□ 1.41
CNTNAP3B-212ENST00000617422 RCOR1Q9UKL0 485 aa23.89■■□□□ 1.41
CNTNAP3B-212ENST00000617422 STX8Q9UNK0 236 aa23.89■■□□□ 1.41
CNTNAP3B-212ENST00000617422 MYSM1Q5VVJ2 828 aa23.88■■□□□ 1.41
CNTNAP3B-212ENST00000617422 SH3BP5LQ7L8J4 393 aa23.88■■□□□ 1.41
CNTNAP3B-212ENST00000617422 ZBTB12Q9Y330 459 aaPredicted RBP23.88■■□□□ 1.41
CNTNAP3B-212ENST00000617422 V9GY48 417 aaPredicted RBP23.88■■□□□ 1.41
CNTNAP3B-212ENST00000617422 VIL1P09327 827 aaKnown RBP23.88■■□□□ 1.41
CNTNAP3B-212ENST00000617422 LIG1P18858 919 aa23.88■■□□□ 1.41
CNTNAP3B-212ENST00000617422 CFAP100Q494V2 611 aa23.88■■□□□ 1.41
CNTNAP3B-212ENST00000617422 HS1BP3Q53T59 392 aa23.88■■□□□ 1.41
CNTNAP3B-212ENST00000617422 RSBN1LQ6PCB5 846 aaPredicted RBP23.88■■□□□ 1.41
CNTNAP3B-212ENST00000617422 ZSCAN30Q86W11 494 aa23.88■■□□□ 1.41
CNTNAP3B-212ENST00000617422 STAG2Q8N3U4 1231 aa23.88■■□□□ 1.41
CNTNAP3B-212ENST00000617422 CTCFLQ8NI51 663 aaPredicted RBP23.88■■□□□ 1.41
CNTNAP3B-212ENST00000617422 CEP95Q96GE4 821 aa23.88■■□□□ 1.41
CNTNAP3B-212ENST00000617422 TDRD3Q9H7E2 651 aaKnown RBP23.88■■□□□ 1.41
CNTNAP3B-212ENST00000617422 SERPINB13Q9UIV8 391 aa23.88■■□□□ 1.41
CNTNAP3B-212ENST00000617422 CLIC4Q9Y696 253 aa23.88■■□□□ 1.41
CNTNAP3B-212ENST00000617422 DDTLA6NHG4 134 aaPredicted RBP23.87■■□□□ 1.41
CNTNAP3B-212ENST00000617422 SHMT1P34896 483 aa23.87■■□□□ 1.41
CNTNAP3B-212ENST00000617422 SLC35G1Q2M3R5 365 aa23.87■■□□□ 1.41
CNTNAP3B-212ENST00000617422 BRAPQ7Z569 592 aa23.87■■□□□ 1.41
CNTNAP3B-212ENST00000617422 KLHL34Q8N239 644 aa23.87■■□□□ 1.41
CNTNAP3B-212ENST00000617422 IDI2Q9BXS1 227 aa23.87■■□□□ 1.41
CNTNAP3B-212ENST00000617422 DNAJC18Q9H819 358 aa23.87■■□□□ 1.41
CNTNAP3B-212ENST00000617422 PRPF3O43395 683 aaKnown RBP23.86■■□□□ 1.41
CNTNAP3B-212ENST00000617422 AKR1B1P15121 316 aa23.86■■□□□ 1.41
CNTNAP3B-212ENST00000617422 VEGFAP15692 232 aaPredicted RBP23.86■■□□□ 1.41
CNTNAP3B-212ENST00000617422 U2AF2P26368 475 aaKnown RBP eCLIP23.86■■□□□ 1.41
CNTNAP3B-212ENST00000617422 WASF1Q92558 559 aa23.86■■□□□ 1.41
CNTNAP3B-212ENST00000617422 ZNF396Q96N95 335 aaPredicted RBP23.86■■□□□ 1.41
CNTNAP3B-212ENST00000617422 MMP1P03956 469 aa23.86■■□□□ 1.41
CNTNAP3B-212ENST00000617422 NOVP48745 357 aa23.86■■□□□ 1.41
CNTNAP3B-212ENST00000617422 CLEC10AQ8IUN9 316 aa23.86■■□□□ 1.41
CNTNAP3B-212ENST00000617422 NFKBIEO00221 500 aa23.85■■□□□ 1.41
CNTNAP3B-212ENST00000617422 UBE2Q2Q8WVN8 375 aa23.85■■□□□ 1.41
CNTNAP3B-212ENST00000617422 RTEL1Q9NZ71 1219 aa23.85■■□□□ 1.41
CNTNAP3B-212ENST00000617422 MAD2L2Q9UI95 211 aa23.85■■□□□ 1.41
CNTNAP3B-212ENST00000617422 SRCAPQ6ZRS2 3230 aa23.85■■□□□ 1.41
CNTNAP3B-212ENST00000617422 FAM196BA6NMK8 535 aa23.85■■□□□ 1.41
CNTNAP3B-212ENST00000617422 BTBD18B2RXH4 712 aa23.85■■□□□ 1.41
CNTNAP3B-212ENST00000617422 TRIM29Q14134 588 aa23.85■■□□□ 1.41
CNTNAP3B-212ENST00000617422 SOGA3Q5TF21 947 aa23.85■■□□□ 1.41
CNTNAP3B-212ENST00000617422 ATL3Q6DD88 541 aa23.85■■□□□ 1.41
CNTNAP3B-212ENST00000617422 VPS54Q9P1Q0 977 aa23.85■■□□□ 1.41
CNTNAP3B-212ENST00000617422 ZNRF3Q9ULT6 936 aa23.85■■□□□ 1.41
CNTNAP3B-212ENST00000617422 MTMR7Q9Y216 660 aa23.85■■□□□ 1.41
CNTNAP3B-212ENST00000617422 PLIN4Q96Q06 1357 aa23.84■■□□□ 1.41
CNTNAP3B-212ENST00000617422 GRM4Q14833 912 aa23.84■■□□□ 1.41
CNTNAP3B-212ENST00000617422 CCDC178Q5BJE1 867 aa23.84■■□□□ 1.41
CNTNAP3B-212ENST00000617422 OXER1Q8TDS5 423 aa23.84■■□□□ 1.41
CNTNAP3B-212ENST00000617422 IGKV6D-41A0A0C4DH26 115 aa23.83■■□□□ 1.41
CNTNAP3B-212ENST00000617422 DIS3L2Q8IYB7 885 aaKnown RBP23.83■■□□□ 1.41
CNTNAP3B-212ENST00000617422 LINC00301Q8NCQ3 95 aa23.83■■□□□ 1.41
CNTNAP3B-212ENST00000617422 PIBF1Q8WXW3 757 aa23.83■■□□□ 1.41
CNTNAP3B-212ENST00000617422 VPS33BQ9H267 617 aa23.83■■□□□ 1.41
CNTNAP3B-212ENST00000617422 GREB1LQ9C091 1923 aaPredicted RBP23.82■■□□□ 1.4
CNTNAP3B-212ENST00000617422 CXCL9Q07325 125 aa23.82■■□□□ 1.4
CNTNAP3B-212ENST00000617422 NR5A1Q13285 461 aa23.82■■□□□ 1.4
CNTNAP3B-212ENST00000617422 SHROOM1Q2M3G4 852 aaPredicted RBP23.82■■□□□ 1.4
CNTNAP3B-212ENST00000617422 NIM1KQ8IY84 436 aa23.82■■□□□ 1.4
CNTNAP3B-212ENST00000617422 MAP3K14Q99558 947 aa23.82■■□□□ 1.4
CNTNAP3B-212ENST00000617422 AKAP17AQ02040 695 aaKnown RBP23.82■■□□□ 1.4
CNTNAP3B-212ENST00000617422 CCDC183Q5T5S1 534 aa23.82■■□□□ 1.4
CNTNAP3B-212ENST00000617422 EHD4Q9H223 541 aa23.82■■□□□ 1.4
CNTNAP3B-212ENST00000617422 TAOK3Q9H2K8 898 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms