RNA–Protein interactions for RNA: ENST00000616545.4

TARDBP-217, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-217ENST00000616545 SCYL3Q8IZE3 742 aa13.65□□□□□ -0.22
TARDBP-217ENST00000616545 ZNF526Q8TF50 670 aaPredicted RBP13.65□□□□□ -0.22
TARDBP-217ENST00000616545 CEP95Q96GE4 821 aa13.65□□□□□ -0.22
TARDBP-217ENST00000616545 TCEANC2Q96MN5 208 aa13.65□□□□□ -0.22
TARDBP-217ENST00000616545 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.65□□□□□ -0.22
TARDBP-217ENST00000616545 SH2D4AQ9H788 454 aa13.65□□□□□ -0.22
TARDBP-217ENST00000616545 KAT14Q9H8E8 782 aa13.65□□□□□ -0.22
TARDBP-217ENST00000616545 ARHGEF10LQ9HCE6 1279 aa13.65□□□□□ -0.22
TARDBP-217ENST00000616545 DAXXQ9UER7 740 aaPredicted RBP13.65□□□□□ -0.22
TARDBP-217ENST00000616545 ZBTB21Q9ULJ3 1066 aa13.65□□□□□ -0.22
TARDBP-217ENST00000616545 SCAF8Q9UPN6 1271 aaKnown RBP13.65□□□□□ -0.22
TARDBP-217ENST00000616545 POLR2AP24928 1970 aaKnown RBP13.64□□□□□ -0.23
TARDBP-217ENST00000616545 CCDC196A0A1B0GTZ2 297 aa13.64□□□□□ -0.23
TARDBP-217ENST00000616545 USP2O75604 605 aaPredicted RBP13.64□□□□□ -0.23
TARDBP-217ENST00000616545 GH2P01242 217 aa13.64□□□□□ -0.23
TARDBP-217ENST00000616545 MAP1SQ66K74 1059 aaPredicted RBP13.64□□□□□ -0.23
TARDBP-217ENST00000616545 RCSD1Q6JBY9 416 aa13.64□□□□□ -0.23
TARDBP-217ENST00000616545 APOA5Q6Q788 366 aa13.64□□□□□ -0.23
TARDBP-217ENST00000616545 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.64□□□□□ -0.23
TARDBP-217ENST00000616545 WRNIP1Q96S55 665 aa13.64□□□□□ -0.23
TARDBP-217ENST00000616545 ZKSCAN3Q9BRR0 538 aa13.64□□□□□ -0.23
TARDBP-217ENST00000616545 LRRC2Q9BYS8 371 aa13.64□□□□□ -0.23
TARDBP-217ENST00000616545 SLKQ9H2G2 1235 aaPredicted RBP13.64□□□□□ -0.23
TARDBP-217ENST00000616545 AS3MTQ9HBK9 375 aa13.64□□□□□ -0.23
TARDBP-217ENST00000616545 PICK1Q9NRD5 415 aa13.64□□□□□ -0.23
TARDBP-217ENST00000616545 STX8Q9UNK0 236 aa13.64□□□□□ -0.23
TARDBP-217ENST00000616545 CSADQ9Y600 493 aa13.64□□□□□ -0.23
TARDBP-217ENST00000616545 MYH8P13535 1937 aa13.64□□□□□ -0.23
TARDBP-217ENST00000616545 SSC5DA1L4H1 1573 aa13.63□□□□□ -0.23
TARDBP-217ENST00000616545 NID2Q14112 1375 aa13.63□□□□□ -0.23
TARDBP-217ENST00000616545 KLF18A0A0U1RQI7 1052 aa13.63□□□□□ -0.23
TARDBP-217ENST00000616545 USP17L5A8MUK1 530 aa13.63□□□□□ -0.23
TARDBP-217ENST00000616545 ZBTB43O43298 467 aa13.63□□□□□ -0.23
TARDBP-217ENST00000616545 POTEIP0CG38 1075 aa13.63□□□□□ -0.23
TARDBP-217ENST00000616545 POTEJP0CG39 1038 aa13.63□□□□□ -0.23
TARDBP-217ENST00000616545 GUCY1A2P33402 732 aa13.63□□□□□ -0.23
TARDBP-217ENST00000616545 ICA1Q05084 483 aa13.63□□□□□ -0.23
TARDBP-217ENST00000616545 APOBRQ0VD83 1088 aa13.63□□□□□ -0.23
TARDBP-217ENST00000616545 COL9A3Q14050 684 aaPredicted RBP13.63□□□□□ -0.23
TARDBP-217ENST00000616545 PRAMEF18Q5VWM3 479 aa13.63□□□□□ -0.23
TARDBP-217ENST00000616545 ANKRD13AQ8IZ07 590 aa13.63□□□□□ -0.23
TARDBP-217ENST00000616545 ZNF654Q8IZM8 581 aa13.63□□□□□ -0.23
TARDBP-217ENST00000616545 SMC1BQ8NDV3 1235 aa13.63□□□□□ -0.23
TARDBP-217ENST00000616545 NKX2-3Q8TAU0 364 aa13.63□□□□□ -0.23
TARDBP-217ENST00000616545 INTS4Q96HW7 963 aaKnown RBP13.63□□□□□ -0.23
TARDBP-217ENST00000616545 TMX3Q96JJ7 454 aa13.63□□□□□ -0.23
TARDBP-217ENST00000616545 TPCN1Q9ULQ1 816 aa13.63□□□□□ -0.23
TARDBP-217ENST00000616545 GREB1LQ9C091 1923 aaPredicted RBP13.62□□□□□ -0.23
TARDBP-217ENST00000616545 NMT2O60551 498 aa13.62□□□□□ -0.23
TARDBP-217ENST00000616545 PFKFB2O60825 505 aa13.62□□□□□ -0.23
TARDBP-217ENST00000616545 GDF11O95390 407 aa13.62□□□□□ -0.23
TARDBP-217ENST00000616545 CD2BP2O95400 341 aaKnown RBP13.62□□□□□ -0.23
TARDBP-217ENST00000616545 PDIA3P30101 505 aaKnown RBP13.62□□□□□ -0.23
TARDBP-217ENST00000616545 KIF5BP33176 963 aa13.62□□□□□ -0.23
TARDBP-217ENST00000616545 GNAQP50148 359 aa13.62□□□□□ -0.23
TARDBP-217ENST00000616545 RRP1BQ14684 758 aaKnown RBP13.62□□□□□ -0.23
TARDBP-217ENST00000616545 SEPT2Q15019 361 aa13.62□□□□□ -0.23
TARDBP-217ENST00000616545 RAB3GAP1Q15042 981 aa13.62□□□□□ -0.23
TARDBP-217ENST00000616545 CPLX2Q6PUV4 134 aaKnown RBP13.62□□□□□ -0.23
TARDBP-217ENST00000616545 PNMA1Q8ND90 353 aa13.62□□□□□ -0.23
TARDBP-217ENST00000616545 TMEM47Q9BQJ4 181 aa13.62□□□□□ -0.23
TARDBP-217ENST00000616545 WDR18Q9BV38 432 aa13.62□□□□□ -0.23
TARDBP-217ENST00000616545 RBM28Q9NW13 759 aaKnown RBP13.62□□□□□ -0.23
TARDBP-217ENST00000616545 CLIP2Q9UDT6 1046 aa13.62□□□□□ -0.23
TARDBP-217ENST00000616545 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.62□□□□□ -0.23
TARDBP-217ENST00000616545 GOLGA8BA8MQT2 603 aa13.61□□□□□ -0.23
TARDBP-217ENST00000616545 KIF3CO14782 793 aa13.61□□□□□ -0.23
TARDBP-217ENST00000616545 TOMM70O94826 608 aa13.61□□□□□ -0.23
TARDBP-217ENST00000616545 ITGBL1O95965 494 aaPredicted RBP13.61□□□□□ -0.23
TARDBP-217ENST00000616545 EEF2P13639 858 aaKnown RBP13.61□□□□□ -0.23
TARDBP-217ENST00000616545 YY1P25490 414 aa13.61□□□□□ -0.23
TARDBP-217ENST00000616545 TROAPQ12815 778 aa13.61□□□□□ -0.23
TARDBP-217ENST00000616545 CUL4AQ13619 759 aa13.61□□□□□ -0.23
TARDBP-217ENST00000616545 TTLL12Q14166 644 aaPredicted RBP13.61□□□□□ -0.23
TARDBP-217ENST00000616545 ME3Q16798 604 aa13.61□□□□□ -0.23
TARDBP-217ENST00000616545 C2orf69Q8N8R5 385 aa13.61□□□□□ -0.23
TARDBP-217ENST00000616545 GMCL1P1Q8NEA9 526 aa13.61□□□□□ -0.23
TARDBP-217ENST00000616545 CTCFLQ8NI51 663 aaPredicted RBP13.61□□□□□ -0.23
TARDBP-217ENST00000616545 RBM46Q8TBY0 533 aaKnown RBP13.61□□□□□ -0.23
TARDBP-217ENST00000616545 IPO9Q96P70 1041 aaKnown RBP13.61□□□□□ -0.23
TARDBP-217ENST00000616545 LZTS2Q9BRK4 669 aa13.61□□□□□ -0.23
TARDBP-217ENST00000616545 LLPHQ9BRT6 129 aaKnown RBP13.61□□□□□ -0.23
TARDBP-217ENST00000616545 BRPF3Q9ULD4 1205 aa13.61□□□□□ -0.23
TARDBP-217ENST00000616545 TMX2Q9Y320 296 aa13.61□□□□□ -0.23
TARDBP-217ENST00000616545 C19orf81C9J6K1 198 aa13.6□□□□□ -0.23
TARDBP-217ENST00000616545 CDKL5O76039 1030 aa13.6□□□□□ -0.23
TARDBP-217ENST00000616545 HSP90AA1P07900 732 aaKnown RBP13.6□□□□□ -0.23
TARDBP-217ENST00000616545 SLURP2P0DP57 97 aa13.6□□□□□ -0.23
TARDBP-217ENST00000616545 PDIA4P13667 645 aaKnown RBP13.6□□□□□ -0.23
TARDBP-217ENST00000616545 PTPRAP18433 802 aa13.6□□□□□ -0.23
TARDBP-217ENST00000616545 SMARCA1P28370 1054 aa13.6□□□□□ -0.23
TARDBP-217ENST00000616545 INPP5BP32019 993 aa13.6□□□□□ -0.23
TARDBP-217ENST00000616545 METAP2P50579 478 aaKnown RBP eCLIP13.6□□□□□ -0.23
TARDBP-217ENST00000616545 USP14P54578 494 aa13.6□□□□□ -0.23
TARDBP-217ENST00000616545 FSTL1Q12841 308 aa13.6□□□□□ -0.23
TARDBP-217ENST00000616545 LDLRAD1Q5T700 205 aa13.6□□□□□ -0.23
TARDBP-217ENST00000616545 FANCBQ8NB91 859 aa13.6□□□□□ -0.23
TARDBP-217ENST00000616545 GTF3C6Q969F1 213 aa13.6□□□□□ -0.23
TARDBP-217ENST00000616545 KIAA1683Q9H0B3 1180 aa13.6□□□□□ -0.23
TARDBP-217ENST00000616545 GBA2Q9HCG7 927 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms