RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 MYCT1Q8N699 235 aa13.95□□□□□ -0.18
TCF4-248ENST00000616053 SMYD2Q9NRG4 433 aa13.95□□□□□ -0.18
TCF4-248ENST00000616053 CAPZA2P47755 286 aa13.95□□□□□ -0.18
TCF4-248ENST00000616053 ARHGEF37A1IGU5 675 aa13.95□□□□□ -0.18
TCF4-248ENST00000616053 KCTD2Q14681 263 aa13.95□□□□□ -0.18
TCF4-248ENST00000616053 RUFY3Q7L099 469 aa13.95□□□□□ -0.18
TCF4-248ENST00000616053 PATL1Q86TB9 770 aaKnown RBP13.95□□□□□ -0.18
TCF4-248ENST00000616053 AKT3Q9Y243 479 aa13.95□□□□□ -0.18
TCF4-248ENST00000616053 SCHIP1Q9P0W5 487 aaPredicted RBP13.95□□□□□ -0.18
TCF4-248ENST00000616053 CALCOCO1Q9P1Z2 691 aa13.95□□□□□ -0.18
TCF4-248ENST00000616053 CSRNP1Q96S65 589 aa13.94□□□□□ -0.18
TCF4-248ENST00000616053 STAM2O75886 525 aa13.94□□□□□ -0.18
TCF4-248ENST00000616053 DNAJC21Q5F1R6 531 aaKnown RBP13.94□□□□□ -0.18
TCF4-248ENST00000616053 KCNG4Q8TDN1 519 aa13.94□□□□□ -0.18
TCF4-248ENST00000616053 UTP11Q9Y3A2 253 aaKnown RBP13.94□□□□□ -0.18
TCF4-248ENST00000616053 FARP1Q9Y4F1 1045 aaPredicted RBP13.94□□□□□ -0.18
TCF4-248ENST00000616053 PCK1P35558 622 aa13.94□□□□□ -0.18
TCF4-248ENST00000616053 RARSP54136 660 aaKnown RBP13.94□□□□□ -0.18
TCF4-248ENST00000616053 FAM71BQ8TC56 605 aa13.94□□□□□ -0.18
TCF4-248ENST00000616053 TBC1D8O95759 1140 aa13.94□□□□□ -0.18
TCF4-248ENST00000616053 VAV2P52735 878 aa13.94□□□□□ -0.18
TCF4-248ENST00000616053 ATP8B3O60423 1300 aa13.94□□□□□ -0.18
TCF4-248ENST00000616053 CCNT1O60563 726 aaKnown RBP13.94□□□□□ -0.18
TCF4-248ENST00000616053 ZC3H12BQ5HYM0 836 aaKnown RBP13.94□□□□□ -0.18
TCF4-248ENST00000616053 CCDC138Q96M89 665 aa13.94□□□□□ -0.18
TCF4-248ENST00000616053 TRIM55Q9BYV6 548 aa13.94□□□□□ -0.18
TCF4-248ENST00000616053 VWA3BQ502W6 1294 aa13.94□□□□□ -0.18
TCF4-248ENST00000616053 C10orf67Q8IYJ2 551 aa13.94□□□□□ -0.18
TCF4-248ENST00000616053 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.94□□□□□ -0.18
TCF4-248ENST00000616053 GLT8D2Q9H1C3 349 aa13.94□□□□□ -0.18
TCF4-248ENST00000616053 SRGAP2BP0DMP2 458 aa13.93□□□□□ -0.18
TCF4-248ENST00000616053 BPIFB4P59827 614 aa13.93□□□□□ -0.18
TCF4-248ENST00000616053 TEX12Q9BXU0 123 aa13.93□□□□□ -0.18
TCF4-248ENST00000616053 TSGA10Q9BZW7 698 aa13.93□□□□□ -0.18
TCF4-248ENST00000616053 GSTA4O15217 222 aa13.93□□□□□ -0.18
TCF4-248ENST00000616053 RBSNQ9H1K0 784 aa13.93□□□□□ -0.18
TCF4-248ENST00000616053 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.93□□□□□ -0.18
TCF4-248ENST00000616053 GTPBP10A4D1E9 387 aaKnown RBP13.93□□□□□ -0.18
TCF4-248ENST00000616053 F6X3S4 739 aa13.93□□□□□ -0.18
TCF4-248ENST00000616053 KRT15P19012 456 aa13.93□□□□□ -0.18
TCF4-248ENST00000616053 GJB2P29033 226 aa13.93□□□□□ -0.18
TCF4-248ENST00000616053 TMPOP42166 694 aaKnown RBP13.93□□□□□ -0.18
TCF4-248ENST00000616053 ARHGDIAP52565 204 aa13.93□□□□□ -0.18
TCF4-248ENST00000616053 LRRC59Q96AG4 307 aaKnown RBP13.93□□□□□ -0.18
TCF4-248ENST00000616053 HGSO14964 777 aaPredicted RBP13.93□□□□□ -0.18
TCF4-248ENST00000616053 TTC4O95801 387 aa13.93□□□□□ -0.18
TCF4-248ENST00000616053 NPHP3Q7Z494 1330 aa13.93□□□□□ -0.18
TCF4-248ENST00000616053 FAM102BQ5T8I3 360 aa13.93□□□□□ -0.18
TCF4-248ENST00000616053 ECHDC1Q9NTX5 307 aa13.93□□□□□ -0.18
TCF4-248ENST00000616053 KRT87PA6NCN2 255 aa13.93□□□□□ -0.18
TCF4-248ENST00000616053 SOX5P35711 763 aa13.93□□□□□ -0.18
TCF4-248ENST00000616053 MCM6Q14566 821 aa13.93□□□□□ -0.18
TCF4-248ENST00000616053 DYRK4Q9NR20 520 aa13.93□□□□□ -0.18
TCF4-248ENST00000616053 DAAM1Q9Y4D1 1078 aa13.93□□□□□ -0.18
TCF4-248ENST00000616053 HOXD10P28358 340 aa13.92□□□□□ -0.18
TCF4-248ENST00000616053 GBP1P32455 592 aa13.92□□□□□ -0.18
TCF4-248ENST00000616053 GOLGA8FQ08AF8 430 aa13.92□□□□□ -0.18
TCF4-248ENST00000616053 GOLGA8DPQ0D2H9 430 aa13.92□□□□□ -0.18
TCF4-248ENST00000616053 CCDC171Q6TFL3 1326 aa13.92□□□□□ -0.18
TCF4-248ENST00000616053 EXOC3O60645 756 aa13.92□□□□□ -0.18
TCF4-248ENST00000616053 HELBQ8NG08 1087 aaPredicted RBP13.92□□□□□ -0.18
TCF4-248ENST00000616053 RAPH1Q70E73 1250 aa13.92□□□□□ -0.18
TCF4-248ENST00000616053 LRGUKQ96M69 825 aa13.92□□□□□ -0.18
TCF4-248ENST00000616053 TRIM45Q9H8W5 580 aaPredicted RBP13.92□□□□□ -0.18
TCF4-248ENST00000616053 GRPEL1Q9HAV7 217 aa13.92□□□□□ -0.18
TCF4-248ENST00000616053 GUCA1BQ9UMX6 200 aa13.92□□□□□ -0.18
TCF4-248ENST00000616053 BCRP11274 1271 aa13.92□□□□□ -0.18
TCF4-248ENST00000616053 MIS12Q9H081 205 aa13.92□□□□□ -0.18
TCF4-248ENST00000616053 RABEP2Q9H5N1 569 aa13.92□□□□□ -0.18
TCF4-248ENST00000616053 HMG20BQ9P0W2 317 aa13.92□□□□□ -0.18
TCF4-248ENST00000616053 GCNT3O95395 438 aa13.92□□□□□ -0.18
TCF4-248ENST00000616053 LIG4P49917 911 aa13.92□□□□□ -0.18
TCF4-248ENST00000616053 RNASE9P60153 205 aaKnown RBP13.92□□□□□ -0.18
TCF4-248ENST00000616053 TRIM14Q14142 442 aa13.92□□□□□ -0.18
TCF4-248ENST00000616053 LMBR1LQ6UX01 489 aa13.92□□□□□ -0.18
TCF4-248ENST00000616053 BTN2A2Q8WVV5 523 aa13.92□□□□□ -0.18
TCF4-248ENST00000616053 A6NJR5 290 aa13.91□□□□□ -0.18
TCF4-248ENST00000616053 PPARGP37231 505 aaPredicted RBP13.91□□□□□ -0.18
TCF4-248ENST00000616053 CLNS1AP54105 237 aaKnown RBP13.91□□□□□ -0.18
TCF4-248ENST00000616053 SNX19Q92543 992 aa13.91□□□□□ -0.18
TCF4-248ENST00000616053 KRT12Q99456 494 aa13.91□□□□□ -0.18
TCF4-248ENST00000616053 RSPH14Q9UHP6 348 aa13.91□□□□□ -0.18
TCF4-248ENST00000616053 A0A1B0GUL7 405 aa13.91□□□□□ -0.18
TCF4-248ENST00000616053 ZNF653Q96CK0 615 aa13.91□□□□□ -0.18
TCF4-248ENST00000616053 EFCC1Q9HA90 598 aa13.91□□□□□ -0.18
TCF4-248ENST00000616053 KRT82Q9NSB4 513 aa13.91□□□□□ -0.18
TCF4-248ENST00000616053 CTTNBP2NLQ9P2B4 639 aa13.91□□□□□ -0.18
TCF4-248ENST00000616053 G3BP2Q9UN86 482 aaKnown RBP13.91□□□□□ -0.18
TCF4-248ENST00000616053 HACD3Q9P035 362 aa13.91□□□□□ -0.18
TCF4-248ENST00000616053 DENND2AQ9ULE3 1009 aa13.91□□□□□ -0.18
TCF4-248ENST00000616053 IRS4O14654 1257 aaPredicted RBP13.91□□□□□ -0.18
TCF4-248ENST00000616053 ARMCX5Q6P1M9 558 aa13.91□□□□□ -0.18
TCF4-248ENST00000616053 VPS37BQ9H9H4 285 aa13.91□□□□□ -0.18
TCF4-248ENST00000616053 PPP2R1AP30153 589 aa13.91□□□□□ -0.18
TCF4-248ENST00000616053 DNAJC8O75937 253 aaPredicted RBP13.91□□□□□ -0.18
TCF4-248ENST00000616053 IL2RBP14784 551 aa13.91□□□□□ -0.18
TCF4-248ENST00000616053 ASIC2Q16515 512 aa13.91□□□□□ -0.18
TCF4-248ENST00000616053 MCMDC2Q4G0Z9 681 aa13.91□□□□□ -0.18
TCF4-248ENST00000616053 MAP3K21Q5TCX8 1036 aa13.91□□□□□ -0.18
TCF4-248ENST00000616053 ARFGAP2Q8N6H7 521 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms