RNA–Protein interactions for RNA: ENST00000615065.1

PRKN-211, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-211ENST00000615065 KIAA1683Q9H0B3 1180 aa17.91■□□□□ 0.46
PRKN-211ENST00000615065 CABP5Q9NP86 173 aa17.91■□□□□ 0.46
PRKN-211ENST00000615065 RBPJLQ9UBG7 517 aa17.91■□□□□ 0.46
PRKN-211ENST00000615065 SGPL1O95470 568 aa17.9■□□□□ 0.46
PRKN-211ENST00000615065 ERVK-9P63128 1117 aa17.9■□□□□ 0.46
PRKN-211ENST00000615065 ERVK-24P63145 666 aa17.9■□□□□ 0.46
PRKN-211ENST00000615065 SEPT2Q15019 361 aa17.9■□□□□ 0.46
PRKN-211ENST00000615065 Q3C1V9 767 aa17.9■□□□□ 0.46
PRKN-211ENST00000615065 SLC44A5Q8NCS7 719 aa17.9■□□□□ 0.46
PRKN-211ENST00000615065 DEFB118Q96PH6 123 aa17.9■□□□□ 0.46
PRKN-211ENST00000615065 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.9■□□□□ 0.46
PRKN-211ENST00000615065 PAK6Q9NQU5 681 aaPredicted RBP17.9■□□□□ 0.46
PRKN-211ENST00000615065 USP17L15C9J2P7 530 aa17.89■□□□□ 0.45
PRKN-211ENST00000615065 USP17L13C9JLJ4 530 aa17.89■□□□□ 0.45
PRKN-211ENST00000615065 USP17L11C9JVI0 530 aa17.89■□□□□ 0.45
PRKN-211ENST00000615065 USP17L18D6R9N7 530 aa17.89■□□□□ 0.45
PRKN-211ENST00000615065 USP17L22D6RA61 530 aa17.89■□□□□ 0.45
PRKN-211ENST00000615065 USP17L17D6RBQ6 530 aa17.89■□□□□ 0.45
PRKN-211ENST00000615065 USP17L19D6RCP7 530 aa17.89■□□□□ 0.45
PRKN-211ENST00000615065 USP17L20D6RJB6 530 aa17.89■□□□□ 0.45
PRKN-211ENST00000615065 MPHOSPH10O00566 681 aaKnown RBP17.89■□□□□ 0.45
PRKN-211ENST00000615065 FARP2O94887 1054 aaPredicted RBP17.89■□□□□ 0.45
PRKN-211ENST00000615065 HMGCRP04035 888 aa17.89■□□□□ 0.45
PRKN-211ENST00000615065 VCAM1P19320 739 aa17.89■□□□□ 0.45
PRKN-211ENST00000615065 USP14P54578 494 aa17.89■□□□□ 0.45
PRKN-211ENST00000615065 USP17L24Q0WX57 530 aa17.89■□□□□ 0.45
PRKN-211ENST00000615065 TRIM32Q13049 653 aa17.89■□□□□ 0.45
PRKN-211ENST00000615065 GTF3C2Q8WUA4 911 aaPredicted RBP17.89■□□□□ 0.45
PRKN-211ENST00000615065 DYNLL2Q96FJ2 89 aa17.89■□□□□ 0.45
PRKN-211ENST00000615065 PORCNQ9H237 461 aa17.89■□□□□ 0.45
PRKN-211ENST00000615065 CEP290O15078 2479 aa17.89■□□□□ 0.45
PRKN-211ENST00000615065 H0YGN5 161 aa17.88■□□□□ 0.45
PRKN-211ENST00000615065 SMIM22K7EJ46 135 aa17.88■□□□□ 0.45
PRKN-211ENST00000615065 CYP2B6P20813 491 aa17.88■□□□□ 0.45
PRKN-211ENST00000615065 HABP4Q5JVS0 413 aaKnown RBP17.88■□□□□ 0.45
PRKN-211ENST00000615065 CATSPERGQ6ZRH7 1159 aa17.88■□□□□ 0.45
PRKN-211ENST00000615065 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.88■□□□□ 0.45
PRKN-211ENST00000615065 ATP8A2Q9NTI2 1148 aa17.88■□□□□ 0.45
PRKN-211ENST00000615065 CYP2D7A0A087X1C5 515 aa17.87■□□□□ 0.45
PRKN-211ENST00000615065 CNMDO75829 334 aa17.87■□□□□ 0.45
PRKN-211ENST00000615065 TFRCP02786 760 aaKnown RBP17.87■□□□□ 0.45
PRKN-211ENST00000615065 MAPK4P31152 587 aa17.87■□□□□ 0.45
PRKN-211ENST00000615065 UBE3CQ15386 1083 aa17.87■□□□□ 0.45
PRKN-211ENST00000615065 TRIB2Q92519 343 aa17.87■□□□□ 0.45
PRKN-211ENST00000615065 DPF3Q92784 378 aa17.87■□□□□ 0.45
PRKN-211ENST00000615065 NUDT12Q9BQG2 462 aa17.87■□□□□ 0.45
PRKN-211ENST00000615065 DCTPP1Q9H773 170 aa17.87■□□□□ 0.45
PRKN-211ENST00000615065 ECHDC1Q9NTX5 307 aa17.87■□□□□ 0.45
PRKN-211ENST00000615065 RLFQ13129 1914 aa17.86■□□□□ 0.45
PRKN-211ENST00000615065 ALPK3Q96L96 1907 aa17.86■□□□□ 0.45
PRKN-211ENST00000615065 A0A1W2PRG0 241 aa17.86■□□□□ 0.45
PRKN-211ENST00000615065 TSHZ3Q63HK5 1081 aa17.86■□□□□ 0.45
PRKN-211ENST00000615065 GPR142Q7Z601 462 aa17.86■□□□□ 0.45
PRKN-211ENST00000615065 CCAR1Q8IX12 1150 aaKnown RBP17.86■□□□□ 0.45
PRKN-211ENST00000615065 SOCS4Q8WXH5 440 aa17.86■□□□□ 0.45
PRKN-211ENST00000615065 CRISPLD2Q9H0B8 497 aa17.86■□□□□ 0.45
PRKN-211ENST00000615065 PUS7LQ9H0K6 701 aaKnown RBP17.86■□□□□ 0.45
PRKN-211ENST00000615065 RPAP3Q9H6T3 665 aaPredicted RBP17.86■□□□□ 0.45
PRKN-211ENST00000615065 SWAP70Q9UH65 585 aa17.86■□□□□ 0.45
PRKN-211ENST00000615065 RABGAP1Q9Y3P9 1069 aa17.86■□□□□ 0.45
PRKN-211ENST00000615065 MORN1Q5T089 497 aa17.85■□□□□ 0.45
PRKN-211ENST00000615065 C12orf60Q5U649 245 aa17.85■□□□□ 0.45
PRKN-211ENST00000615065 TMEM179Q6ZVK1 233 aa17.85■□□□□ 0.45
PRKN-211ENST00000615065 PLEKHH3Q7Z736 793 aa17.85■□□□□ 0.45
PRKN-211ENST00000615065 CLEC10AQ8IUN9 316 aa17.85■□□□□ 0.45
PRKN-211ENST00000615065 USP6NLQ92738 828 aa17.85■□□□□ 0.45
PRKN-211ENST00000615065 HTATIP2Q9BUP3 242 aa17.85■□□□□ 0.45
PRKN-211ENST00000615065 SLC4A4Q9Y6R1 1079 aa17.85■□□□□ 0.45
PRKN-211ENST00000615065 PARP14Q460N5 1801 aa17.84■□□□□ 0.45
PRKN-211ENST00000615065 A0A0G2JMZ2 1700 aa17.84■□□□□ 0.45
PRKN-211ENST00000615065 RPTORQ8N122 1335 aa17.84■□□□□ 0.45
PRKN-211ENST00000615065 SPDYE16A6NNV3 312 aaPredicted RBP17.84■□□□□ 0.45
PRKN-211ENST00000615065 USP17L12C9JPN9 530 aa17.84■□□□□ 0.45
PRKN-211ENST00000615065 USP17L21D6R901 530 aa17.84■□□□□ 0.45
PRKN-211ENST00000615065 XRCC5P13010 732 aaKnown RBP17.84■□□□□ 0.45
PRKN-211ENST00000615065 AKR1B1P15121 316 aa17.84■□□□□ 0.45
PRKN-211ENST00000615065 ZSCAN25Q6NSZ9 544 aa17.84■□□□□ 0.45
PRKN-211ENST00000615065 LBX2Q6XYB7 198 aa17.84■□□□□ 0.45
PRKN-211ENST00000615065 HMX1Q9NP08 348 aaPredicted RBP17.84■□□□□ 0.45
PRKN-211ENST00000615065 BTBD7Q9P203 1132 aa17.84■□□□□ 0.45
PRKN-211ENST00000615065 COLQQ9Y215 455 aaPredicted RBP17.84■□□□□ 0.45
PRKN-211ENST00000615065 CDK8P49336 464 aa17.83■□□□□ 0.44
PRKN-211ENST00000615065 CCL14Q16627 93 aa17.83■□□□□ 0.44
PRKN-211ENST00000615065 KIAA1755Q5JYT7 1200 aa17.83■□□□□ 0.44
PRKN-211ENST00000615065 DIS3LQ8TF46 1054 aaKnown RBP17.83■□□□□ 0.44
PRKN-211ENST00000615065 GPATCH3Q96I76 525 aa17.83■□□□□ 0.44
PRKN-211ENST00000615065 CWC22Q9HCG8 908 aaKnown RBP17.83■□□□□ 0.44
PRKN-211ENST00000615065 PCDHB15Q9Y5E8 787 aa17.83■□□□□ 0.44
PRKN-211ENST00000615065 PRKAR2AP13861 404 aaKnown RBP17.82■□□□□ 0.44
PRKN-211ENST00000615065 ZKSCAN1P17029 563 aaPredicted RBP17.82■□□□□ 0.44
PRKN-211ENST00000615065 CAPN2P17655 700 aa17.82■□□□□ 0.44
PRKN-211ENST00000615065 RGS2P41220 211 aa17.82■□□□□ 0.44
PRKN-211ENST00000615065 CCNA1P78396 465 aa17.82■□□□□ 0.44
PRKN-211ENST00000615065 ICA1Q05084 483 aa17.82■□□□□ 0.44
PRKN-211ENST00000615065 MAP3K21Q5TCX8 1036 aa17.82■□□□□ 0.44
PRKN-211ENST00000615065 WDR78Q5VTH9 848 aa17.82■□□□□ 0.44
PRKN-211ENST00000615065 CTR9Q6PD62 1173 aa17.82■□□□□ 0.44
PRKN-211ENST00000615065 C16orf86Q6ZW13 317 aa17.82■□□□□ 0.44
PRKN-211ENST00000615065 SIAH1Q8IUQ4 282 aa17.82■□□□□ 0.44
PRKN-211ENST00000615065 AMOTL1Q8IY63 956 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms