RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 CCDC122Q5T0U0 273 aa16.46■□□□□ 0.23
SNPH-203ENST00000614659 CEP152O94986 1710 aa16.46■□□□□ 0.23
SNPH-203ENST00000614659 KCNQ3O43525 872 aa16.46■□□□□ 0.23
SNPH-203ENST00000614659 CTNNA2P26232 953 aa16.46■□□□□ 0.23
SNPH-203ENST00000614659 ZMYM1Q5SVZ6 1142 aa16.46■□□□□ 0.23
SNPH-203ENST00000614659 FAM173BQ6P4H8 233 aa16.46■□□□□ 0.23
SNPH-203ENST00000614659 PIK3AP1Q6ZUJ8 805 aa16.46■□□□□ 0.23
SNPH-203ENST00000614659 KIAA1210Q9ULL0 1709 aa16.46■□□□□ 0.22
SNPH-203ENST00000614659 NPR1P16066 1061 aa16.46■□□□□ 0.22
SNPH-203ENST00000614659 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.46■□□□□ 0.22
SNPH-203ENST00000614659 AGLP35573 1532 aa16.45■□□□□ 0.22
SNPH-203ENST00000614659 MCM6Q14566 821 aa16.45■□□□□ 0.22
SNPH-203ENST00000614659 NONOQ15233 471 aaKnown RBP eCLIP16.45■□□□□ 0.22
SNPH-203ENST00000614659 SUPT20HL1Q3ZLR7 823 aa16.45■□□□□ 0.22
SNPH-203ENST00000614659 GALNT17Q6IS24 598 aa16.45■□□□□ 0.22
SNPH-203ENST00000614659 RSPH14Q9UHP6 348 aa16.45■□□□□ 0.22
SNPH-203ENST00000614659 JAG2Q9Y219 1238 aa16.45■□□□□ 0.22
SNPH-203ENST00000614659 PALLDQ8WX93 1383 aa16.45■□□□□ 0.22
SNPH-203ENST00000614659 PHACTR2O75167 634 aa16.45■□□□□ 0.22
SNPH-203ENST00000614659 PPARAQ07869 468 aa16.45■□□□□ 0.22
SNPH-203ENST00000614659 PDE4DQ08499 809 aa16.45■□□□□ 0.22
SNPH-203ENST00000614659 CLEC4GQ6UXB4 293 aa16.45■□□□□ 0.22
SNPH-203ENST00000614659 NUCKS1Q9H1E3 243 aaKnown RBP16.45■□□□□ 0.22
SNPH-203ENST00000614659 CCDC77Q9BR77 488 aa16.45■□□□□ 0.22
SNPH-203ENST00000614659 TSKSQ9UJT2 592 aa16.45■□□□□ 0.22
SNPH-203ENST00000614659 PRR36Q9H6K5 1346 aa16.44■□□□□ 0.22
SNPH-203ENST00000614659 CA8P35219 290 aa16.44■□□□□ 0.22
SNPH-203ENST00000614659 RTEL1Q9NZ71 1219 aa16.44■□□□□ 0.22
SNPH-203ENST00000614659 TBC1D8BQ0IIM8 1120 aa16.44■□□□□ 0.22
SNPH-203ENST00000614659 NOSTRINQ8IVI9 506 aa16.44■□□□□ 0.22
SNPH-203ENST00000614659 RFX7Q2KHR2 1363 aa16.44■□□□□ 0.22
SNPH-203ENST00000614659 DDAH1O94760 285 aa16.44■□□□□ 0.22
SNPH-203ENST00000614659 SLC1A4P43007 532 aa16.44■□□□□ 0.22
SNPH-203ENST00000614659 SIRT2Q8IXJ6 389 aa16.44■□□□□ 0.22
SNPH-203ENST00000614659 TDRD7Q8NHU6 1098 aaKnown RBP16.44■□□□□ 0.22
SNPH-203ENST00000614659 NAP1L3Q99457 506 aaPredicted RBP16.44■□□□□ 0.22
SNPH-203ENST00000614659 NFE2L3Q9Y4A8 694 aa16.44■□□□□ 0.22
SNPH-203ENST00000614659 PFKFB1P16118 471 aa16.44■□□□□ 0.22
SNPH-203ENST00000614659 CLUL1Q15846 466 aa16.44■□□□□ 0.22
SNPH-203ENST00000614659 AATFQ9NY61 560 aaKnown RBP eCLIP16.44■□□□□ 0.22
SNPH-203ENST00000614659 EPB41P11171 864 aaKnown RBP16.43■□□□□ 0.22
SNPH-203ENST00000614659 CTDSPL2Q05D32 466 aa16.43■□□□□ 0.22
SNPH-203ENST00000614659 LETM2Q2VYF4 491 aa16.43■□□□□ 0.22
SNPH-203ENST00000614659 TCHPQ9BT92 498 aa16.43■□□□□ 0.22
SNPH-203ENST00000614659 LRRIQ1Q96JM4 1722 aa16.43■□□□□ 0.22
SNPH-203ENST00000614659 CALUO43852 315 aaPredicted RBP16.43■□□□□ 0.22
SNPH-203ENST00000614659 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.43■□□□□ 0.22
SNPH-203ENST00000614659 ZFP91Q96JP5 570 aaPredicted RBP16.43■□□□□ 0.22
SNPH-203ENST00000614659 RPGRIP1Q96KN7 1286 aa16.43■□□□□ 0.22
SNPH-203ENST00000614659 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.43■□□□□ 0.22
SNPH-203ENST00000614659 DLC1Q96QB1 1528 aa16.43■□□□□ 0.22
SNPH-203ENST00000614659 RPS6KA4O75676 772 aa16.42■□□□□ 0.22
SNPH-203ENST00000614659 ARMC9Q7Z3E5 817 aa16.42■□□□□ 0.22
SNPH-203ENST00000614659 ZNF654Q8IZM8 581 aa16.42■□□□□ 0.22
SNPH-203ENST00000614659 MSANTD4Q8NCY6 345 aa16.42■□□□□ 0.22
SNPH-203ENST00000614659 GJD4Q96KN9 370 aaPredicted RBP16.42■□□□□ 0.22
SNPH-203ENST00000614659 ZNF804BA4D1E1 1349 aa16.42■□□□□ 0.22
SNPH-203ENST00000614659 NOP56O00567 594 aaKnown RBP16.42■□□□□ 0.22
SNPH-203ENST00000614659 PPP6R2O75170 966 aa16.42■□□□□ 0.22
SNPH-203ENST00000614659 NT5C2P49902 561 aa16.42■□□□□ 0.22
SNPH-203ENST00000614659 CSGALNACT2Q8N6G5 542 aa16.42■□□□□ 0.22
SNPH-203ENST00000614659 PUF60Q9UHX1 559 aaKnown RBP16.42■□□□□ 0.22
SNPH-203ENST00000614659 ASAP1Q9ULH1 1129 aa16.42■□□□□ 0.22
SNPH-203ENST00000614659 PDIA3P30101 505 aaKnown RBP16.42■□□□□ 0.22
SNPH-203ENST00000614659 ADCY7P51828 1080 aa16.42■□□□□ 0.22
SNPH-203ENST00000614659 IFNL3Q8IZI9 196 aa16.42■□□□□ 0.22
SNPH-203ENST00000614659 USP28Q96RU2 1077 aa16.42■□□□□ 0.22
SNPH-203ENST00000614659 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.42■□□□□ 0.22
SNPH-203ENST00000614659 HEG1Q9ULI3 1381 aa16.42■□□□□ 0.22
SNPH-203ENST00000614659 CCT6AP40227 531 aaKnown RBP16.41■□□□□ 0.22
SNPH-203ENST00000614659 TULP4Q9NRJ4 1543 aa16.41■□□□□ 0.22
SNPH-203ENST00000614659 M0QZ92 97 aa16.41■□□□□ 0.22
SNPH-203ENST00000614659 PDE6AP16499 860 aa16.41■□□□□ 0.22
SNPH-203ENST00000614659 CCNA1P78396 465 aa16.41■□□□□ 0.22
SNPH-203ENST00000614659 CEP128Q6ZU80 1094 aa16.41■□□□□ 0.22
SNPH-203ENST00000614659 CDAN1Q8IWY9 1227 aa16.41■□□□□ 0.22
SNPH-203ENST00000614659 JAKMIP2Q96AA8 810 aa16.41■□□□□ 0.22
SNPH-203ENST00000614659 NR1I2O75469 434 aa16.41■□□□□ 0.22
SNPH-203ENST00000614659 TMED8Q6PL24 325 aaPredicted RBP16.41■□□□□ 0.22
SNPH-203ENST00000614659 TTLL6Q8N841 843 aa16.41■□□□□ 0.22
SNPH-203ENST00000614659 PHKBQ93100 1093 aa16.41■□□□□ 0.22
SNPH-203ENST00000614659 TTC14Q96N46 770 aa16.41■□□□□ 0.22
SNPH-203ENST00000614659 STAMBPO95630 424 aa16.41■□□□□ 0.22
SNPH-203ENST00000614659 AZI2Q9H6S1 392 aa16.41■□□□□ 0.22
SNPH-203ENST00000614659 CAPN2P17655 700 aa16.41■□□□□ 0.22
SNPH-203ENST00000614659 MASTLQ96GX5 879 aa16.41■□□□□ 0.22
SNPH-203ENST00000614659 ZSCAN10Q96SZ4 725 aaPredicted RBP16.41■□□□□ 0.22
SNPH-203ENST00000614659 MAGEF1Q9HAY2 307 aa16.41■□□□□ 0.22
SNPH-203ENST00000614659 GPCPD1Q9NPB8 672 aa16.41■□□□□ 0.22
SNPH-203ENST00000614659 PIM2Q9P1W9 311 aa16.41■□□□□ 0.22
SNPH-203ENST00000614659 CCNT1O60563 726 aaKnown RBP16.4■□□□□ 0.22
SNPH-203ENST00000614659 ACTN2P35609 894 aa16.4■□□□□ 0.22
SNPH-203ENST00000614659 NLRX1Q86UT6 975 aa16.4■□□□□ 0.22
SNPH-203ENST00000614659 CCDC84Q86UT8 332 aaPredicted RBP16.4■□□□□ 0.22
SNPH-203ENST00000614659 POLR3EQ9NVU0 708 aa16.4■□□□□ 0.22
SNPH-203ENST00000614659 GNA14O95837 355 aa16.4■□□□□ 0.22
SNPH-203ENST00000614659 TTC31Q49AM3 519 aaPredicted RBP16.4■□□□□ 0.22
SNPH-203ENST00000614659 CCDC26Q8TAB7 109 aa16.4■□□□□ 0.22
SNPH-203ENST00000614659 FAM76AQ8TAV0 307 aa16.4■□□□□ 0.22
SNPH-203ENST00000614659 XPO4Q9C0E2 1151 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms