RNA–Protein interactions for RNA: ENST00000614478.1

GEN1-208, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

Gene GEN1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-208ENST00000614478 CCDC178Q5BJE1 867 aa20.58■□□□□ 0.89
GEN1-208ENST00000614478 OTUD7BQ6GQQ9 843 aa20.58■□□□□ 0.89
GEN1-208ENST00000614478 DGKHQ86XP1 1220 aa20.58■□□□□ 0.89
GEN1-208ENST00000614478 FBXO18Q8NFZ0 1043 aa20.58■□□□□ 0.89
GEN1-208ENST00000614478 GPT2Q8TD30 523 aa20.58■□□□□ 0.89
GEN1-208ENST00000614478 ALG1Q9BT22 464 aa20.58■□□□□ 0.89
GEN1-208ENST00000614478 SLC26A6Q9BXS9 759 aa20.58■□□□□ 0.89
GEN1-208ENST00000614478 STK36Q9NRP7 1315 aa20.58■□□□□ 0.88
GEN1-208ENST00000614478 MMP14P50281 582 aa20.57■□□□□ 0.88
GEN1-208ENST00000614478 GABPAQ06546 454 aa20.57■□□□□ 0.88
GEN1-208ENST00000614478 CFAP100Q494V2 611 aa20.57■□□□□ 0.88
GEN1-208ENST00000614478 NBPF11Q86T75 865 aa20.57■□□□□ 0.88
GEN1-208ENST00000614478 CMTR1Q8N1G2 835 aaKnown RBP20.57■□□□□ 0.88
GEN1-208ENST00000614478 CRACR2BQ8N4Y2 399 aaPredicted RBP20.57■□□□□ 0.88
GEN1-208ENST00000614478 ANKS1AQ92625 1134 aa20.57■□□□□ 0.88
GEN1-208ENST00000614478 AIFM3Q96NN9 605 aa20.57■□□□□ 0.88
GEN1-208ENST00000614478 GJB4Q9NTQ9 266 aa20.57■□□□□ 0.88
GEN1-208ENST00000614478 GADD45BO75293 160 aaPredicted RBP20.56■□□□□ 0.88
GEN1-208ENST00000614478 CACNB3P54284 484 aa20.56■□□□□ 0.88
GEN1-208ENST00000614478 TRIM22Q8IYM9 498 aa20.56■□□□□ 0.88
GEN1-208ENST00000614478 CCDC82Q8N4S0 544 aa20.56■□□□□ 0.88
GEN1-208ENST00000614478 RGS22Q8NE09 1264 aa20.56■□□□□ 0.88
GEN1-208ENST00000614478 IDI2Q9BXS1 227 aa20.56■□□□□ 0.88
GEN1-208ENST00000614478 RBM28Q9NW13 759 aaKnown RBP20.56■□□□□ 0.88
GEN1-208ENST00000614478 ZFPM1Q8IX07 1006 aa20.56■□□□□ 0.88
GEN1-208ENST00000614478 KAT14Q9H8E8 782 aa20.56■□□□□ 0.88
GEN1-208ENST00000614478 GPRC5DQ9NZD1 345 aa20.56■□□□□ 0.88
GEN1-208ENST00000614478 HLA-DOAP06340 250 aa20.55■□□□□ 0.88
GEN1-208ENST00000614478 LMOD1P29536 600 aaPredicted RBP20.55■□□□□ 0.88
GEN1-208ENST00000614478 OGFOD1Q8N543 542 aa20.55■□□□□ 0.88
GEN1-208ENST00000614478 NEDD1Q8NHV4 660 aa20.55■□□□□ 0.88
GEN1-208ENST00000614478 TFIP11Q9UBB9 837 aaKnown RBP20.55■□□□□ 0.88
GEN1-208ENST00000614478 SERPINB13Q9UIV8 391 aa20.55■□□□□ 0.88
GEN1-208ENST00000614478 IQCA1LA6NCM1 817 aa20.54■□□□□ 0.88
GEN1-208ENST00000614478 UBE2Q2LH0YL09 131 aa20.54■□□□□ 0.88
GEN1-208ENST00000614478 ZNF445P59923 1031 aa20.54■□□□□ 0.88
GEN1-208ENST00000614478 TCP10Q12799 353 aa20.54■□□□□ 0.88
GEN1-208ENST00000614478 WASF1Q92558 559 aa20.54■□□□□ 0.88
GEN1-208ENST00000614478 PRMT6Q96LA8 375 aaPredicted RBP20.54■□□□□ 0.88
GEN1-208ENST00000614478 TDRD3Q9H7E2 651 aaKnown RBP20.54■□□□□ 0.88
GEN1-208ENST00000614478 FAM198AQ9UFP1 575 aa20.54■□□□□ 0.88
GEN1-208ENST00000614478 CNOT7Q9UIV1 285 aaKnown RBP20.54■□□□□ 0.88
GEN1-208ENST00000614478 YY1P25490 414 aa20.54■□□□□ 0.88
GEN1-208ENST00000614478 GUCY1A2P33402 732 aa20.54■□□□□ 0.88
GEN1-208ENST00000614478 CTCFLQ8NI51 663 aaPredicted RBP20.54■□□□□ 0.88
GEN1-208ENST00000614478 SWAP70Q9UH65 585 aa20.54■□□□□ 0.88
GEN1-208ENST00000614478 HDAC9Q9UKV0 1011 aa20.54■□□□□ 0.88
GEN1-208ENST00000614478 TAOK2Q9UL54 1235 aa20.54■□□□□ 0.88
GEN1-208ENST00000614478 NPM3O75607 178 aaKnown RBP20.53■□□□□ 0.88
GEN1-208ENST00000614478 PLEKHA8P1O95397 391 aa20.53■□□□□ 0.88
GEN1-208ENST00000614478 DEXIO95424 95 aa20.53■□□□□ 0.88
GEN1-208ENST00000614478 MRE11P49959 708 aa20.53■□□□□ 0.88
GEN1-208ENST00000614478 KRT40Q6A162 431 aa20.53■□□□□ 0.88
GEN1-208ENST00000614478 MICALL2Q8IY33 904 aa20.53■□□□□ 0.88
GEN1-208ENST00000614478 PNMA1Q8ND90 353 aa20.53■□□□□ 0.88
GEN1-208ENST00000614478 SCAND2PQ9GZW5 306 aaPredicted RBP20.53■□□□□ 0.88
GEN1-208ENST00000614478 DHX36Q9H2U1 1008 aaKnown RBP20.53■□□□□ 0.88
GEN1-208ENST00000614478 STX8Q9UNK0 236 aa20.53■□□□□ 0.88
GEN1-208ENST00000614478 H7C1D1 291 aa20.52■□□□□ 0.88
GEN1-208ENST00000614478 ZNF280AP59817 542 aaPredicted RBP20.52■□□□□ 0.88
GEN1-208ENST00000614478 FUT2Q10981 343 aa20.52■□□□□ 0.88
GEN1-208ENST00000614478 TRIM29Q14134 588 aa20.52■□□□□ 0.88
GEN1-208ENST00000614478 CAVIN1Q6NZI2 390 aaKnown RBP20.52■□□□□ 0.88
GEN1-208ENST00000614478 TMTC3Q6ZXV5 915 aa20.52■□□□□ 0.88
GEN1-208ENST00000614478 RNF26Q9BY78 433 aaPredicted RBP20.52■□□□□ 0.88
GEN1-208ENST00000614478 HACL1Q9UJ83 578 aa20.52■□□□□ 0.88
GEN1-208ENST00000614478 UBE2HP62256 183 aa20.52■□□□□ 0.87
GEN1-208ENST00000614478 SYAP1Q96A49 352 aaPredicted RBP20.52■□□□□ 0.87
GEN1-208ENST00000614478 TMEM47Q9BQJ4 181 aa20.52■□□□□ 0.87
GEN1-208ENST00000614478 EHD4Q9H223 541 aa20.52■□□□□ 0.87
GEN1-208ENST00000614478 CFAP45Q9UL16 551 aa20.52■□□□□ 0.87
GEN1-208ENST00000614478 MYH8P13535 1937 aa20.51■□□□□ 0.87
GEN1-208ENST00000614478 EPS15P42566 896 aa20.51■□□□□ 0.87
GEN1-208ENST00000614478 AKAP17AQ02040 695 aaKnown RBP20.51■□□□□ 0.87
GEN1-208ENST00000614478 ZNF526Q8TF50 670 aaPredicted RBP20.51■□□□□ 0.87
GEN1-208ENST00000614478 CEP95Q96GE4 821 aa20.51■□□□□ 0.87
GEN1-208ENST00000614478 SPATA32Q96LK8 384 aa20.51■□□□□ 0.87
GEN1-208ENST00000614478 MAP3K14Q99558 947 aa20.51■□□□□ 0.87
GEN1-208ENST00000614478 DDTLA6NHG4 134 aaPredicted RBP20.5■□□□□ 0.87
GEN1-208ENST00000614478 SPDYE2BA6NHP3 402 aa20.5■□□□□ 0.87
GEN1-208ENST00000614478 POTECB2RU33 542 aa20.5■□□□□ 0.87
GEN1-208ENST00000614478 PRPF3O43395 683 aaKnown RBP20.5■□□□□ 0.87
GEN1-208ENST00000614478 SPDYE6P0CI01 402 aa20.5■□□□□ 0.87
GEN1-208ENST00000614478 VEGFAP15692 232 aaPredicted RBP20.5■□□□□ 0.87
GEN1-208ENST00000614478 KIF5BP33176 963 aa20.5■□□□□ 0.87
GEN1-208ENST00000614478 SHMT1P34896 483 aa20.5■□□□□ 0.87
GEN1-208ENST00000614478 KIF23Q02241 960 aaPredicted RBP20.5■□□□□ 0.87
GEN1-208ENST00000614478 LEO1Q8WVC0 666 aaPredicted RBP20.5■□□□□ 0.87
GEN1-208ENST00000614478 ZNF396Q96N95 335 aaPredicted RBP20.5■□□□□ 0.87
GEN1-208ENST00000614478 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.5■□□□□ 0.87
GEN1-208ENST00000614478 MYH6P13533 1939 aa20.5■□□□□ 0.87
GEN1-208ENST00000614478 ELP1O95163 1332 aa20.5■□□□□ 0.87
GEN1-208ENST00000614478 SHTN1A0MZ66 631 aa20.5■□□□□ 0.87
GEN1-208ENST00000614478 KIF28PB7ZC32 967 aa20.5■□□□□ 0.87
GEN1-208ENST00000614478 AKR1B1P15121 316 aa20.5■□□□□ 0.87
GEN1-208ENST00000614478 DLGAP5Q15398 846 aa20.5■□□□□ 0.87
GEN1-208ENST00000614478 TPRNQ4KMQ1 711 aa20.5■□□□□ 0.87
GEN1-208ENST00000614478 ATL3Q6DD88 541 aa20.5■□□□□ 0.87
GEN1-208ENST00000614478 SH3BP5LQ7L8J4 393 aa20.5■□□□□ 0.87
GEN1-208ENST00000614478 BRAPQ7Z569 592 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms