RNA–Protein interactions for RNA: ENST00000612540.1

PRKN-210, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-210ENST00000612540 TATDN1Q6P1N9 297 aa15.08■□□□□ 0
PRKN-210ENST00000612540 HSCBQ8IWL3 235 aa15.08■□□□□ 0
PRKN-210ENST00000612540 TMEM87BQ96K49 555 aa15.08■□□□□ 0
PRKN-210ENST00000612540 CABP5Q9NP86 173 aa15.08■□□□□ 0
PRKN-210ENST00000612540 GPHNQ9NQX3 736 aaPredicted RBP15.08■□□□□ 0
PRKN-210ENST00000612540 TNKSO95271 1327 aa15.08■□□□□ 0
PRKN-210ENST00000612540 WDR19Q8NEZ3 1342 aa15.08■□□□□ 0
PRKN-210ENST00000612540 GREB1LQ9C091 1923 aaPredicted RBP15.07■□□□□ 0
PRKN-210ENST00000612540 SH2B2O14492 632 aaPredicted RBP15.07■□□□□ 0
PRKN-210ENST00000612540 CA12O43570 354 aa15.07■□□□□ 0
PRKN-210ENST00000612540 NMT2O60551 498 aa15.07■□□□□ 0
PRKN-210ENST00000612540 ATP2B2Q01814 1243 aa15.07■□□□□ 0
PRKN-210ENST00000612540 WTAPQ15007 396 aa15.07■□□□□ 0
PRKN-210ENST00000612540 ANKRD1Q15327 319 aa15.07■□□□□ 0
PRKN-210ENST00000612540 NFXL1Q6ZNB6 911 aa15.07■□□□□ 0
PRKN-210ENST00000612540 NEDD1Q8NHV4 660 aa15.07■□□□□ 0
PRKN-210ENST00000612540 BRF1Q92994 677 aa15.07■□□□□ 0
PRKN-210ENST00000612540 TTC14Q96N46 770 aa15.07■□□□□ 0
PRKN-210ENST00000612540 WRNIP1Q96S55 665 aa15.07■□□□□ 0
PRKN-210ENST00000612540 ZSCAN10Q96SZ4 725 aaPredicted RBP15.07■□□□□ 0
PRKN-210ENST00000612540 ZIC5Q96T25 663 aa15.07■□□□□ 0
PRKN-210ENST00000612540 LARP6Q9BRS8 491 aaKnown RBP15.07■□□□□ 0
PRKN-210ENST00000612540 GBA2Q9HCG7 927 aaPredicted RBP15.07■□□□□ 0
PRKN-210ENST00000612540 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.07■□□□□ 0
PRKN-210ENST00000612540 FZD1Q9UP38 647 aa15.07■□□□□ 0
PRKN-210ENST00000612540 PLIN4Q96Q06 1357 aa15.07■□□□□ 0
PRKN-210ENST00000612540 OTOFQ9HC10 1997 aa15.06■□□□□ 0
PRKN-210ENST00000612540 PPP1R12BO60237 982 aaPredicted RBP15.06■□□□□ 0
PRKN-210ENST00000612540 GH2P01242 217 aa15.06■□□□□ 0
PRKN-210ENST00000612540 NOGQ13253 232 aa15.06■□□□□ 0
PRKN-210ENST00000612540 RAB3GAP1Q15042 981 aa15.06■□□□□ 0
PRKN-210ENST00000612540 SHROOM1Q2M3G4 852 aaPredicted RBP15.06■□□□□ 0
PRKN-210ENST00000612540 CCDC178Q5BJE1 867 aa15.06■□□□□ 0
PRKN-210ENST00000612540 IFIT1BQ5T764 474 aaKnown RBP15.06■□□□□ 0
PRKN-210ENST00000612540 TMEM179Q6ZVK1 233 aa15.06■□□□□ 0
PRKN-210ENST00000612540 CLEC10AQ8IUN9 316 aa15.06■□□□□ 0
PRKN-210ENST00000612540 ANGEL1Q9UNK9 670 aaKnown RBP15.06■□□□□ 0
PRKN-210ENST00000612540 CCDC69A6NI79 296 aa15.05■□□□□ -0
PRKN-210ENST00000612540 FAM155AB1AL88 458 aaPredicted RBP15.05■□□□□ -0
PRKN-210ENST00000612540 CD2BP2O95400 341 aaKnown RBP15.05■□□□□ -0
PRKN-210ENST00000612540 INPP5BP32019 993 aa15.05■□□□□ -0
PRKN-210ENST00000612540 MAP3K10Q02779 954 aa15.05■□□□□ -0
PRKN-210ENST00000612540 APOBRQ0VD83 1088 aa15.05■□□□□ -0
PRKN-210ENST00000612540 TOB2Q14106 344 aaPredicted RBP15.05■□□□□ -0
PRKN-210ENST00000612540 RRP1BQ14684 758 aaKnown RBP15.05■□□□□ -0
PRKN-210ENST00000612540 SEPT2Q15019 361 aa15.05■□□□□ -0
PRKN-210ENST00000612540 RGMBQ6NW40 437 aa15.05■□□□□ -0
PRKN-210ENST00000612540 ENAHQ8N8S7 591 aaPredicted RBP15.05■□□□□ -0
PRKN-210ENST00000612540 LY9Q9HBG7 655 aa15.05■□□□□ -0
PRKN-210ENST00000612540 ZBTB21Q9ULJ3 1066 aa15.05■□□□□ -0
PRKN-210ENST00000612540 STX8Q9UNK0 236 aa15.05■□□□□ -0
PRKN-210ENST00000612540 KLF18A0A0U1RQI7 1052 aa15.04■□□□□ -0
PRKN-210ENST00000612540 CAP2P40123 477 aa15.04■□□□□ -0
PRKN-210ENST00000612540 IREB2P48200 963 aaKnown RBP15.04■□□□□ -0
PRKN-210ENST00000612540 MCM2P49736 904 aa15.04■□□□□ -0
PRKN-210ENST00000612540 ICA1Q05084 483 aa15.04■□□□□ -0
PRKN-210ENST00000612540 BECN1Q14457 450 aa15.04■□□□□ -0
PRKN-210ENST00000612540 C2orf69Q8N8R5 385 aa15.04■□□□□ -0
PRKN-210ENST00000612540 IL27Q8NEV9 243 aa15.04■□□□□ -0
PRKN-210ENST00000612540 IGDCC4Q8TDY8 1250 aa15.04■□□□□ -0
PRKN-210ENST00000612540 CEP95Q96GE4 821 aa15.04■□□□□ -0
PRKN-210ENST00000612540 MTA3Q9BTC8 594 aa15.04■□□□□ -0
PRKN-210ENST00000612540 PICK1Q9NRD5 415 aa15.04■□□□□ -0
PRKN-210ENST00000612540 GOLGA8BA8MQT2 603 aa15.03■□□□□ -0
PRKN-210ENST00000612540 PHF20L1A8MW92 1017 aa15.03■□□□□ -0
PRKN-210ENST00000612540 CTNND1O60716 968 aaKnown RBP15.03■□□□□ -0
PRKN-210ENST00000612540 ASNSP08243 561 aa15.03■□□□□ -0
PRKN-210ENST00000612540 SEC23AQ15436 765 aa15.03■□□□□ -0
PRKN-210ENST00000612540 PPP4R3BQ5MIZ7 849 aa15.03■□□□□ -0
PRKN-210ENST00000612540 SYNE3Q6ZMZ3 975 aa15.03■□□□□ -0
PRKN-210ENST00000612540 ARMC9Q7Z3E5 817 aa15.03■□□□□ -0
PRKN-210ENST00000612540 RAB11FIP4Q86YS3 637 aa15.03■□□□□ -0
PRKN-210ENST00000612540 SNX21Q969T3 373 aa15.03■□□□□ -0
PRKN-210ENST00000612540 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.03■□□□□ -0
PRKN-210ENST00000612540 ALDH8A1Q9H2A2 487 aaPredicted RBP15.03■□□□□ -0
PRKN-210ENST00000612540 KAT14Q9H8E8 782 aa15.03■□□□□ -0
PRKN-210ENST00000612540 SENP2Q9HC62 589 aa15.03■□□□□ -0
PRKN-210ENST00000612540 IL17RBQ9NRM6 502 aa15.03■□□□□ -0
PRKN-210ENST00000612540 TCP11L1Q9NUJ3 509 aa15.03■□□□□ -0
PRKN-210ENST00000612540 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.03■□□□□ -0
PRKN-210ENST00000612540 LIMCH1Q9UPQ0 1083 aa15.03■□□□□ -0
PRKN-210ENST00000612540 MTMR7Q9Y216 660 aa15.03■□□□□ -0
PRKN-210ENST00000612540 CSADQ9Y600 493 aa15.03■□□□□ -0
PRKN-210ENST00000612540 PAPPA2Q9BXP8 1791 aa15.03■□□□□ -0
PRKN-210ENST00000612540 IGKV6D-41A0A0C4DH26 115 aa15.02■□□□□ -0
PRKN-210ENST00000612540 CCDC85CA6NKD9 419 aa15.02■□□□□ -0
PRKN-210ENST00000612540 RAD21O60216 631 aa15.02■□□□□ -0
PRKN-210ENST00000612540 USP2O75604 605 aaPredicted RBP15.02■□□□□ -0
PRKN-210ENST00000612540 TTLL1O95922 423 aa15.02■□□□□ -0
PRKN-210ENST00000612540 LIFRP42702 1097 aa15.02■□□□□ -0
PRKN-210ENST00000612540 JAG1P78504 1218 aa15.02■□□□□ -0
PRKN-210ENST00000612540 MAP3K9P80192 1104 aa15.02■□□□□ -0
PRKN-210ENST00000612540 STK3Q13188 491 aa15.02■□□□□ -0
PRKN-210ENST00000612540 MOB2Q70IA6 237 aa15.02■□□□□ -0
PRKN-210ENST00000612540 MICU3Q86XE3 530 aa15.02■□□□□ -0
PRKN-210ENST00000612540 SCYL3Q8IZE3 742 aa15.02■□□□□ -0
PRKN-210ENST00000612540 LRRC47Q8N1G4 583 aaKnown RBP15.02■□□□□ -0
PRKN-210ENST00000612540 TMTC2Q8N394 836 aa15.02■□□□□ -0
PRKN-210ENST00000612540 ZKSCAN4Q969J2 545 aaPredicted RBP15.02■□□□□ -0
PRKN-210ENST00000612540 CCDC102AQ96A19 550 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms