RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 SART3Q15020 963 aaKnown RBP16.88■□□□□ 0.29
CDH1-213ENST00000612417 CCAR2Q8N163 923 aaKnown RBP16.88■□□□□ 0.29
CDH1-213ENST00000612417 ZC3H12CQ9C0D7 883 aaKnown RBP16.88■□□□□ 0.29
CDH1-213ENST00000612417 INCENPQ9NQS7 918 aa16.88■□□□□ 0.29
CDH1-213ENST00000612417 TOMM22Q9NS69 142 aa16.88■□□□□ 0.29
CDH1-213ENST00000612417 IFNKQ9P0W0 207 aa16.88■□□□□ 0.29
CDH1-213ENST00000612417 USP27XA6NNY8 438 aa16.87■□□□□ 0.29
CDH1-213ENST00000612417 CHRNA5P30532 468 aa16.87■□□□□ 0.29
CDH1-213ENST00000612417 NOSTRINQ8IVI9 506 aa16.87■□□□□ 0.29
CDH1-213ENST00000612417 TMTC2Q8N394 836 aa16.87■□□□□ 0.29
CDH1-213ENST00000612417 CCDC112Q8NEF3 446 aa16.87■□□□□ 0.29
CDH1-213ENST00000612417 MYL10Q9BUA6 226 aa16.87■□□□□ 0.29
CDH1-213ENST00000612417 SLC26A6Q9BXS9 759 aa16.87■□□□□ 0.29
CDH1-213ENST00000612417 CRNKL1Q9BZJ0 848 aaKnown RBP16.87■□□□□ 0.29
CDH1-213ENST00000612417 ZNF219Q9P2Y4 722 aaPredicted RBP16.87■□□□□ 0.29
CDH1-213ENST00000612417 G3V3G9 751 aa16.87■□□□□ 0.29
CDH1-213ENST00000612417 KIF2AO00139 706 aaPredicted RBP16.87■□□□□ 0.29
CDH1-213ENST00000612417 MYO1BO43795 1136 aa16.87■□□□□ 0.29
CDH1-213ENST00000612417 MMP1P03956 469 aa16.87■□□□□ 0.29
CDH1-213ENST00000612417 GSTO1P78417 241 aa16.87■□□□□ 0.29
CDH1-213ENST00000612417 PTPN14Q15678 1187 aa16.87■□□□□ 0.29
CDH1-213ENST00000612417 RRP12Q5JTH9 1297 aaKnown RBP16.87■□□□□ 0.29
CDH1-213ENST00000612417 DCAF8Q5TAQ9 597 aa16.87■□□□□ 0.29
CDH1-213ENST00000612417 STYK1Q6J9G0 422 aa16.87■□□□□ 0.29
CDH1-213ENST00000612417 TMED8Q6PL24 325 aaPredicted RBP16.87■□□□□ 0.29
CDH1-213ENST00000612417 HSD3B7Q9H2F3 369 aa16.87■□□□□ 0.29
CDH1-213ENST00000612417 MAST2Q6P0Q8 1798 aa16.86■□□□□ 0.29
CDH1-213ENST00000612417 SMC2O95347 1197 aa16.86■□□□□ 0.29
CDH1-213ENST00000612417 PPARAQ07869 468 aa16.86■□□□□ 0.29
CDH1-213ENST00000612417 NCBP1Q09161 790 aaKnown RBP16.86■□□□□ 0.29
CDH1-213ENST00000612417 PDCL2Q8N4E4 241 aa16.86■□□□□ 0.29
CDH1-213ENST00000612417 FOXP1Q9H334 677 aaPredicted RBP16.86■□□□□ 0.29
CDH1-213ENST00000612417 RNF41Q9H4P4 317 aaPredicted RBP16.86■□□□□ 0.29
CDH1-213ENST00000612417 LTBP1Q14766 1721 aa16.86■□□□□ 0.29
CDH1-213ENST00000612417 CCDC196A0A1B0GTZ2 297 aa16.85■□□□□ 0.29
CDH1-213ENST00000612417 WTAPQ15007 396 aa16.85■□□□□ 0.29
CDH1-213ENST00000612417 GRIK5Q16478 980 aa16.85■□□□□ 0.29
CDH1-213ENST00000612417 RTN1Q16799 776 aa16.85■□□□□ 0.29
CDH1-213ENST00000612417 TRIM22Q8IYM9 498 aa16.85■□□□□ 0.29
CDH1-213ENST00000612417 KRI1Q8N9T8 703 aaKnown RBP16.85■□□□□ 0.29
CDH1-213ENST00000612417 NOL10Q9BSC4 688 aaKnown RBP16.85■□□□□ 0.29
CDH1-213ENST00000612417 MYH2Q9UKX2 1941 aa16.85■□□□□ 0.29
CDH1-213ENST00000612417 SAFBQ15424 915 aaKnown RBP eCLIP16.85■□□□□ 0.29
CDH1-213ENST00000612417 DIXDC1Q155Q3 683 aa16.85■□□□□ 0.29
CDH1-213ENST00000612417 MFSD14BQ5SR56 506 aa16.85■□□□□ 0.29
CDH1-213ENST00000612417 ARMCX5Q6P1M9 558 aa16.85■□□□□ 0.29
CDH1-213ENST00000612417 KRBA2Q6ZNG9 492 aa16.85■□□□□ 0.29
CDH1-213ENST00000612417 METTL16Q86W50 562 aaKnown RBP16.85■□□□□ 0.29
CDH1-213ENST00000612417 KCNH3Q9ULD8 1083 aa16.85■□□□□ 0.29
CDH1-213ENST00000612417 DLEC1Q9Y238 1755 aa16.85■□□□□ 0.29
CDH1-213ENST00000612417 DEXIO95424 95 aa16.84■□□□□ 0.29
CDH1-213ENST00000612417 LDHCP07864 332 aa16.84■□□□□ 0.29
CDH1-213ENST00000612417 GTF2IP78347 998 aa16.84■□□□□ 0.29
CDH1-213ENST00000612417 FANCCQ00597 558 aa16.84■□□□□ 0.29
CDH1-213ENST00000612417 MYL5Q02045 173 aa16.84■□□□□ 0.29
CDH1-213ENST00000612417 DOK7Q18PE1 504 aa16.84■□□□□ 0.29
CDH1-213ENST00000612417 TMC6Q7Z403 805 aa16.84■□□□□ 0.29
CDH1-213ENST00000612417 CNKSR1Q969H4 720 aa16.84■□□□□ 0.29
CDH1-213ENST00000612417 CLIC6Q96NY7 704 aa16.84■□□□□ 0.29
CDH1-213ENST00000612417 COA1Q9GZY4 146 aa16.84■□□□□ 0.29
CDH1-213ENST00000612417 ANAPC4Q9UJX5 808 aa16.84■□□□□ 0.29
CDH1-213ENST00000612417 SLX4Q8IY92 1834 aa16.84■□□□□ 0.29
CDH1-213ENST00000612417 ERICH2A1L162 156 aa16.84■□□□□ 0.29
CDH1-213ENST00000612417 PSDA5PKW4 1024 aaPredicted RBP16.84■□□□□ 0.29
CDH1-213ENST00000612417 UBE2Q2LH0YL09 131 aa16.84■□□□□ 0.29
CDH1-213ENST00000612417 SFPQP23246 707 aaKnown RBP eCLIP16.84■□□□□ 0.29
CDH1-213ENST00000612417 TOB1P50616 345 aaPredicted RBP16.84■□□□□ 0.29
CDH1-213ENST00000612417 PNOCQ13519 176 aa16.84■□□□□ 0.29
CDH1-213ENST00000612417 PPP2R5BQ15173 497 aa16.84■□□□□ 0.29
CDH1-213ENST00000612417 RILPL1Q5EBL4 403 aa16.84■□□□□ 0.29
CDH1-213ENST00000612417 DIS3L2Q8IYB7 885 aaKnown RBP16.84■□□□□ 0.29
CDH1-213ENST00000612417 CRACR2BQ8N4Y2 399 aaPredicted RBP16.84■□□□□ 0.29
CDH1-213ENST00000612417 TBC1D22AQ8WUA7 517 aa16.84■□□□□ 0.29
CDH1-213ENST00000612417 EYA3Q99504 573 aa16.84■□□□□ 0.29
CDH1-213ENST00000612417 MORC2Q9Y6X9 1032 aaPredicted RBP16.84■□□□□ 0.29
CDH1-213ENST00000612417 CYP2D7A0A087X1C5 515 aa16.83■□□□□ 0.28
CDH1-213ENST00000612417 IGSF3O75054 1194 aa16.83■□□□□ 0.28
CDH1-213ENST00000612417 BAG3O95817 575 aa16.83■□□□□ 0.28
CDH1-213ENST00000612417 GUCY1A2P33402 732 aa16.83■□□□□ 0.28
CDH1-213ENST00000612417 LONRF3Q496Y0 759 aa16.83■□□□□ 0.28
CDH1-213ENST00000612417 BTBD18B2RXH4 712 aa16.82■□□□□ 0.28
CDH1-213ENST00000612417 CBFA2T2O43439 604 aa16.82■□□□□ 0.28
CDH1-213ENST00000612417 NRDCO43847 1150 aa16.82■□□□□ 0.28
CDH1-213ENST00000612417 PTPREP23469 700 aa16.82■□□□□ 0.28
CDH1-213ENST00000612417 LMOD1P29536 600 aaPredicted RBP16.82■□□□□ 0.28
CDH1-213ENST00000612417 MDM2Q00987 491 aaPredicted RBP16.82■□□□□ 0.28
CDH1-213ENST00000612417 PPP4R3BQ5MIZ7 849 aa16.82■□□□□ 0.28
CDH1-213ENST00000612417 E4F1Q66K89 784 aaPredicted RBP16.82■□□□□ 0.28
CDH1-213ENST00000612417 ZNF579Q8NAF0 562 aaKnown RBP16.82■□□□□ 0.28
CDH1-213ENST00000612417 CNNM3Q8NE01 707 aa16.82■□□□□ 0.28
CDH1-213ENST00000612417 ATP8A2Q9NTI2 1148 aa16.82■□□□□ 0.28
CDH1-213ENST00000612417 HOOK1Q9UJC3 728 aaKnown RBP16.82■□□□□ 0.28
CDH1-213ENST00000612417 DUOX1Q9NRD9 1551 aa16.82■□□□□ 0.28
CDH1-213ENST00000612417 USP17L12C9JPN9 530 aa16.82■□□□□ 0.28
CDH1-213ENST00000612417 USP17L21D6R901 530 aa16.82■□□□□ 0.28
CDH1-213ENST00000612417 USP5P45974 858 aa16.82■□□□□ 0.28
CDH1-213ENST00000612417 NT5DC1Q5TFE4 455 aa16.82■□□□□ 0.28
CDH1-213ENST00000612417 SMAP1Q8IYB5 467 aaPredicted RBP16.82■□□□□ 0.28
CDH1-213ENST00000612417 ZNF654Q8IZM8 581 aa16.82■□□□□ 0.28
CDH1-213ENST00000612417 FANCBQ8NB91 859 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms