RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 LRRFIP1Q32MZ4 808 aaKnown RBP12.2□□□□□ -0.46
PCDHGC3-202ENST00000611950 E4F1Q66K89 784 aaPredicted RBP12.2□□□□□ -0.46
PCDHGC3-202ENST00000611950 KRT40Q6A162 431 aa12.2□□□□□ -0.46
PCDHGC3-202ENST00000611950 IRAK4Q9NWZ3 460 aa12.2□□□□□ -0.46
PCDHGC3-202ENST00000611950 NEDD4P46934 1319 aa12.2□□□□□ -0.46
PCDHGC3-202ENST00000611950 TMEM232C9JQI7 657 aa12.2□□□□□ -0.46
PCDHGC3-202ENST00000611950 SERPINC1P01008 464 aa12.2□□□□□ -0.46
PCDHGC3-202ENST00000611950 CYP19A1P11511 503 aaPredicted RBP12.2□□□□□ -0.46
PCDHGC3-202ENST00000611950 SYKP43405 635 aa12.2□□□□□ -0.46
PCDHGC3-202ENST00000611950 CFAP100Q494V2 611 aa12.2□□□□□ -0.46
PCDHGC3-202ENST00000611950 GRAMD1CQ8IYS0 662 aa12.2□□□□□ -0.46
PCDHGC3-202ENST00000611950 KCNG4Q8TDN1 519 aa12.2□□□□□ -0.46
PCDHGC3-202ENST00000611950 SLC26A6Q9BXS9 759 aa12.2□□□□□ -0.46
PCDHGC3-202ENST00000611950 ZNF532Q9HCE3 1301 aa12.2□□□□□ -0.46
PCDHGC3-202ENST00000611950 KCNJ14Q9UNX9 436 aa12.2□□□□□ -0.46
PCDHGC3-202ENST00000611950 MYH7P12883 1935 aa12.2□□□□□ -0.46
PCDHGC3-202ENST00000611950 ABCC12Q96J65 1359 aa12.2□□□□□ -0.46
PCDHGC3-202ENST00000611950 hCG_1642624A0A1W2PR95 340 aa12.19□□□□□ -0.46
PCDHGC3-202ENST00000611950 IRS4O14654 1257 aaPredicted RBP12.19□□□□□ -0.46
PCDHGC3-202ENST00000611950 TPD52L2O43399 206 aaKnown RBP12.19□□□□□ -0.46
PCDHGC3-202ENST00000611950 CDC25BP30305 580 aa12.19□□□□□ -0.46
PCDHGC3-202ENST00000611950 GRIN1Q05586 938 aa12.19□□□□□ -0.46
PCDHGC3-202ENST00000611950 ERCC6LQ2NKX8 1250 aa12.19□□□□□ -0.46
PCDHGC3-202ENST00000611950 KMT5BQ4FZB7 885 aa12.19□□□□□ -0.46
PCDHGC3-202ENST00000611950 MFSD4BQ5TF39 518 aa12.19□□□□□ -0.46
PCDHGC3-202ENST00000611950 APBB1IPQ7Z5R6 666 aaPredicted RBP12.19□□□□□ -0.46
PCDHGC3-202ENST00000611950 ZNF232Q9UNY5 417 aa12.19□□□□□ -0.46
PCDHGC3-202ENST00000611950 DDX60Q8IY21 1712 aaKnown RBP12.19□□□□□ -0.46
PCDHGC3-202ENST00000611950 SMIM22K7EJ46 135 aa12.19□□□□□ -0.46
PCDHGC3-202ENST00000611950 DEF6Q9H4E7 631 aa12.19□□□□□ -0.46
PCDHGC3-202ENST00000611950 MYO5AQ9Y4I1 1855 aaKnown RBP12.19□□□□□ -0.46
PCDHGC3-202ENST00000611950 PRKAB2O43741 272 aa12.19□□□□□ -0.46
PCDHGC3-202ENST00000611950 CAVIN2O95810 425 aa12.19□□□□□ -0.46
PCDHGC3-202ENST00000611950 GUCY1A2P33402 732 aa12.19□□□□□ -0.46
PCDHGC3-202ENST00000611950 ADD2P35612 726 aa12.19□□□□□ -0.46
PCDHGC3-202ENST00000611950 FANCCQ00597 558 aa12.19□□□□□ -0.46
PCDHGC3-202ENST00000611950 FBXO38Q6PIJ6 1188 aa12.19□□□□□ -0.46
PCDHGC3-202ENST00000611950 SHC4Q6S5L8 630 aa12.19□□□□□ -0.46
PCDHGC3-202ENST00000611950 NYAP1Q6ZVC0 841 aa12.19□□□□□ -0.46
PCDHGC3-202ENST00000611950 TRMT44Q8IYL2 757 aaKnown RBP12.19□□□□□ -0.46
PCDHGC3-202ENST00000611950 KIF18AQ8NI77 898 aa12.19□□□□□ -0.46
PCDHGC3-202ENST00000611950 KCNV2Q8TDN2 545 aa12.19□□□□□ -0.46
PCDHGC3-202ENST00000611950 RANBP17Q9H2T7 1088 aaKnown RBP12.19□□□□□ -0.46
PCDHGC3-202ENST00000611950 TRMT112Q9UI30 125 aaKnown RBP12.19□□□□□ -0.46
PCDHGC3-202ENST00000611950 MORC2Q9Y6X9 1032 aaPredicted RBP12.19□□□□□ -0.46
PCDHGC3-202ENST00000611950 UBN2Q6ZU65 1347 aa12.18□□□□□ -0.46
PCDHGC3-202ENST00000611950 ANKRD18BA2A2Z9 1011 aa12.18□□□□□ -0.46
PCDHGC3-202ENST00000611950 MIGA1Q8NAN2 632 aa12.18□□□□□ -0.46
PCDHGC3-202ENST00000611950 PPP1R13BQ96KQ4 1090 aa12.18□□□□□ -0.46
PCDHGC3-202ENST00000611950 EPC1Q9H2F5 836 aa12.18□□□□□ -0.46
PCDHGC3-202ENST00000611950 ARMT1Q9H993 441 aa12.18□□□□□ -0.46
PCDHGC3-202ENST00000611950 POLR3EQ9NVU0 708 aa12.18□□□□□ -0.46
PCDHGC3-202ENST00000611950 ANGEL1Q9UNK9 670 aaKnown RBP12.18□□□□□ -0.46
PCDHGC3-202ENST00000611950 BAZ2BQ9UIF8 2168 aaKnown RBP12.18□□□□□ -0.46
PCDHGC3-202ENST00000611950 GOLGA8AA7E2F4 631 aa12.18□□□□□ -0.46
PCDHGC3-202ENST00000611950 RANBP6O60518 1105 aaKnown RBP12.18□□□□□ -0.46
PCDHGC3-202ENST00000611950 ECEL1O95672 775 aa12.18□□□□□ -0.46
PCDHGC3-202ENST00000611950 NCAPHQ15003 741 aa12.18□□□□□ -0.46
PCDHGC3-202ENST00000611950 LONRF3Q496Y0 759 aa12.18□□□□□ -0.46
PCDHGC3-202ENST00000611950 TMEM67Q5HYA8 995 aa12.18□□□□□ -0.46
PCDHGC3-202ENST00000611950 ATL3Q6DD88 541 aa12.18□□□□□ -0.46
PCDHGC3-202ENST00000611950 APOA5Q6Q788 366 aa12.18□□□□□ -0.46
PCDHGC3-202ENST00000611950 NUP133Q8WUM0 1156 aa12.18□□□□□ -0.46
PCDHGC3-202ENST00000611950 AIDAQ96BJ3 306 aa12.18□□□□□ -0.46
PCDHGC3-202ENST00000611950 GPBP1L1Q9HC44 474 aaPredicted RBP12.18□□□□□ -0.46
PCDHGC3-202ENST00000611950 DNAI1Q9UI46 699 aa12.18□□□□□ -0.46
PCDHGC3-202ENST00000611950 DDX41Q9UJV9 622 aaKnown RBP12.18□□□□□ -0.46
PCDHGC3-202ENST00000611950 UBASH3AP57075 661 aa12.17□□□□□ -0.46
PCDHGC3-202ENST00000611950 JAKMIP3Q5VZ66 844 aa12.17□□□□□ -0.46
PCDHGC3-202ENST00000611950 UTP14AQ9BVJ6 771 aaKnown RBP12.17□□□□□ -0.46
PCDHGC3-202ENST00000611950 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.17□□□□□ -0.46
PCDHGC3-202ENST00000611950 BTBD18B2RXH4 712 aa12.17□□□□□ -0.46
PCDHGC3-202ENST00000611950 COBLO75128 1261 aa12.17□□□□□ -0.46
PCDHGC3-202ENST00000611950 PDE8BO95263 885 aa12.17□□□□□ -0.46
PCDHGC3-202ENST00000611950 YEATS4O95619 227 aa12.17□□□□□ -0.46
PCDHGC3-202ENST00000611950 NAT1P18440 290 aa12.17□□□□□ -0.46
PCDHGC3-202ENST00000611950 NLRP12P59046 1061 aa12.17□□□□□ -0.46
PCDHGC3-202ENST00000611950 CCDC102BQ68D86 513 aa12.17□□□□□ -0.46
PCDHGC3-202ENST00000611950 MAGEB6Q8N7X4 407 aa12.17□□□□□ -0.46
PCDHGC3-202ENST00000611950 TATDN2Q93075 761 aa12.17□□□□□ -0.46
PCDHGC3-202ENST00000611950 FANCLQ9NW38 375 aa12.17□□□□□ -0.46
PCDHGC3-202ENST00000611950 MYH3P11055 1940 aa12.17□□□□□ -0.46
PCDHGC3-202ENST00000611950 ANKRD36CQ5JPF3 1778 aa12.16□□□□□ -0.46
PCDHGC3-202ENST00000611950 A0A1W2PQ27 194 aa12.16□□□□□ -0.46
PCDHGC3-202ENST00000611950 A0A1W2PQ64 194 aa12.16□□□□□ -0.46
PCDHGC3-202ENST00000611950 A0A1W2PQD8 194 aa12.16□□□□□ -0.46
PCDHGC3-202ENST00000611950 TESPA1A2RU30 521 aaPredicted RBP12.16□□□□□ -0.46
PCDHGC3-202ENST00000611950 IFIT3O14879 490 aaKnown RBP12.16□□□□□ -0.46
PCDHGC3-202ENST00000611950 ZBTB43O43298 467 aa12.16□□□□□ -0.46
PCDHGC3-202ENST00000611950 MBD4O95243 580 aa12.16□□□□□ -0.46
PCDHGC3-202ENST00000611950 IARSP41252 1262 aaKnown RBP12.16□□□□□ -0.46
PCDHGC3-202ENST00000611950 PDE4BQ07343 736 aa12.16□□□□□ -0.46
PCDHGC3-202ENST00000611950 C10orf67Q8IYJ2 551 aa12.16□□□□□ -0.46
PCDHGC3-202ENST00000611950 ZNF512BQ96KM6 892 aaPredicted RBP12.16□□□□□ -0.46
PCDHGC3-202ENST00000611950 TAF1LQ8IZX4 1826 aa12.16□□□□□ -0.46
PCDHGC3-202ENST00000611950 MYO1CO00159 1063 aa12.16□□□□□ -0.46
PCDHGC3-202ENST00000611950 NEFHP12036 1026 aa12.16□□□□□ -0.46
PCDHGC3-202ENST00000611950 PDE6AP16499 860 aa12.16□□□□□ -0.46
PCDHGC3-202ENST00000611950 CASP1P29466 404 aa12.16□□□□□ -0.46
PCDHGC3-202ENST00000611950 CYP2C19P33261 490 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms