RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 CNTNAP5Q8WYK1 1306 aa15.66■□□□□ 0.1
NEK3-205ENST00000610828 FAM237AA0A1B0GTK4 181 aa15.65■□□□□ 0.1
NEK3-205ENST00000610828 BTDP43251 543 aa15.65■□□□□ 0.1
NEK3-205ENST00000610828 MFSD14BQ5SR56 506 aa15.65■□□□□ 0.1
NEK3-205ENST00000610828 SARM1Q6SZW1 724 aa15.65■□□□□ 0.1
NEK3-205ENST00000610828 CRAMP1Q96RY5 1269 aa15.65■□□□□ 0.1
NEK3-205ENST00000610828 KAT14Q9H8E8 782 aa15.65■□□□□ 0.1
NEK3-205ENST00000610828 PODXL2Q9NZ53 605 aa15.65■□□□□ 0.1
NEK3-205ENST00000610828 CLIP2Q9UDT6 1046 aa15.65■□□□□ 0.1
NEK3-205ENST00000610828 SAP30BPQ9UHR5 308 aaKnown RBP15.65■□□□□ 0.1
NEK3-205ENST00000610828 FAM205CA6NFA0 338 aa15.65■□□□□ 0.1
NEK3-205ENST00000610828 NLRP12P59046 1061 aa15.65■□□□□ 0.1
NEK3-205ENST00000610828 RBM6P78332 1123 aaKnown RBP15.65■□□□□ 0.1
NEK3-205ENST00000610828 GRIN1Q05586 938 aa15.65■□□□□ 0.1
NEK3-205ENST00000610828 ISM2Q6H9L7 571 aa15.65■□□□□ 0.1
NEK3-205ENST00000610828 CCDC186Q7Z3E2 898 aa15.65■□□□□ 0.1
NEK3-205ENST00000610828 C17orf53Q8N3J3 647 aaPredicted RBP15.65■□□□□ 0.1
NEK3-205ENST00000610828 BRMS1Q9HCU9 246 aa15.65■□□□□ 0.1
NEK3-205ENST00000610828 NRBP1Q9UHY1 535 aa15.65■□□□□ 0.1
NEK3-205ENST00000610828 FBXO2Q9UK22 296 aaPredicted RBP15.65■□□□□ 0.1
NEK3-205ENST00000610828 CEP131Q9UPN4 1083 aa15.65■□□□□ 0.1
NEK3-205ENST00000610828 BAZ2BQ9UIF8 2168 aaKnown RBP15.64■□□□□ 0.09
NEK3-205ENST00000610828 PTPREP23469 700 aa15.64■□□□□ 0.09
NEK3-205ENST00000610828 PLCD1P51178 756 aa15.64■□□□□ 0.09
NEK3-205ENST00000610828 CNNM3Q8NE01 707 aa15.64■□□□□ 0.09
NEK3-205ENST00000610828 IL17RBQ9NRM6 502 aa15.64■□□□□ 0.09
NEK3-205ENST00000610828 PPEF1O14829 653 aaPredicted RBP15.64■□□□□ 0.09
NEK3-205ENST00000610828 TSPY3P0CV98 308 aa15.64■□□□□ 0.09
NEK3-205ENST00000610828 TSPY8P0CW00 308 aa15.64■□□□□ 0.09
NEK3-205ENST00000610828 KIF5BP33176 963 aa15.64■□□□□ 0.09
NEK3-205ENST00000610828 PNOCQ13519 176 aa15.64■□□□□ 0.09
NEK3-205ENST00000610828 NOLC1Q14978 699 aaKnown RBP eCLIP15.64■□□□□ 0.09
NEK3-205ENST00000610828 LONRF3Q496Y0 759 aa15.64■□□□□ 0.09
NEK3-205ENST00000610828 SLC44A5Q8NCS7 719 aa15.64■□□□□ 0.09
NEK3-205ENST00000610828 R3HCC1Q9Y3T6 440 aaKnown RBP15.64■□□□□ 0.09
NEK3-205ENST00000610828 ROBO3Q96MS0 1386 aa15.64■□□□□ 0.09
NEK3-205ENST00000610828 NAV1Q8NEY1 1877 aa15.64■□□□□ 0.09
NEK3-205ENST00000610828 KLRG2A4D1S0 409 aaPredicted RBP15.63■□□□□ 0.09
NEK3-205ENST00000610828 EARS2Q5JPH6 523 aaKnown RBP15.63■□□□□ 0.09
NEK3-205ENST00000610828 KRBA2Q6ZNG9 492 aa15.63■□□□□ 0.09
NEK3-205ENST00000610828 DGKHQ86XP1 1220 aa15.63■□□□□ 0.09
NEK3-205ENST00000610828 ZNF444Q8N0Y2 327 aaPredicted RBP15.63■□□□□ 0.09
NEK3-205ENST00000610828 PNMA1Q8ND90 353 aa15.63■□□□□ 0.09
NEK3-205ENST00000610828 FAM13BQ9NYF5 915 aa15.63■□□□□ 0.09
NEK3-205ENST00000610828 USP17L3A6NCW0 530 aa15.63■□□□□ 0.09
NEK3-205ENST00000610828 USP17L4A6NCW7 530 aa15.63■□□□□ 0.09
NEK3-205ENST00000610828 USP17L1Q7RTZ2 530 aa15.63■□□□□ 0.09
NEK3-205ENST00000610828 CERS3Q8IU89 383 aa15.63■□□□□ 0.09
NEK3-205ENST00000610828 TEX11Q8IYF3 940 aa15.63■□□□□ 0.09
NEK3-205ENST00000610828 BPIFA3Q9BQP9 254 aa15.63■□□□□ 0.09
NEK3-205ENST00000610828 PYCARDQ9ULZ3 195 aa15.63■□□□□ 0.09
NEK3-205ENST00000610828 GPR75-ASB3A0A0A6YYF3 556 aa15.62■□□□□ 0.09
NEK3-205ENST00000610828 TRIM75PA6NK02 468 aa15.62■□□□□ 0.09
NEK3-205ENST00000610828 RIMBP2O15034 1052 aa15.62■□□□□ 0.09
NEK3-205ENST00000610828 SCG2P13521 617 aa15.62■□□□□ 0.09
NEK3-205ENST00000610828 CDC25BP30305 580 aa15.62■□□□□ 0.09
NEK3-205ENST00000610828 ZNF827Q17R98 1081 aa15.62■□□□□ 0.09
NEK3-205ENST00000610828 DNTTIP2Q5QJE6 756 aaKnown RBP15.62■□□□□ 0.09
NEK3-205ENST00000610828 METTL16Q86W50 562 aaKnown RBP15.62■□□□□ 0.09
NEK3-205ENST00000610828 MRFAP1L1Q96HT8 127 aa15.62■□□□□ 0.09
NEK3-205ENST00000610828 TUBE1Q9UJT0 475 aa15.62■□□□□ 0.09
NEK3-205ENST00000610828 SRPRBQ9Y5M8 271 aaKnown RBP15.62■□□□□ 0.09
NEK3-205ENST00000610828 NT5C2P49902 561 aa15.62■□□□□ 0.09
NEK3-205ENST00000610828 TBC1D22AQ8WUA7 517 aa15.62■□□□□ 0.09
NEK3-205ENST00000610828 STX8Q9UNK0 236 aa15.62■□□□□ 0.09
NEK3-205ENST00000610828 POLR2DO15514 142 aaKnown RBP15.61■□□□□ 0.09
NEK3-205ENST00000610828 NLRP5P59047 1200 aa15.61■□□□□ 0.09
NEK3-205ENST00000610828 GTF2IP78347 998 aa15.61■□□□□ 0.09
NEK3-205ENST00000610828 NPY5RQ15761 445 aa15.61■□□□□ 0.09
NEK3-205ENST00000610828 TMC4Q7Z404 712 aa15.61■□□□□ 0.09
NEK3-205ENST00000610828 SLF2Q8IX21 1173 aa15.61■□□□□ 0.09
NEK3-205ENST00000610828 SP8Q8IXZ3 490 aa15.61■□□□□ 0.09
NEK3-205ENST00000610828 KIAA1524Q8TCG1 905 aa15.61■□□□□ 0.09
NEK3-205ENST00000610828 MTMR7Q9Y216 660 aa15.61■□□□□ 0.09
NEK3-205ENST00000610828 VEGFAP15692 232 aaPredicted RBP15.61■□□□□ 0.09
NEK3-205ENST00000610828 PLCG2P16885 1265 aa15.61■□□□□ 0.09
NEK3-205ENST00000610828 HMGB2P26583 209 aaKnown RBP15.61■□□□□ 0.09
NEK3-205ENST00000610828 PFKFB3Q16875 520 aaPredicted RBP15.61■□□□□ 0.09
NEK3-205ENST00000610828 NOM1Q5C9Z4 860 aaKnown RBP15.61■□□□□ 0.09
NEK3-205ENST00000610828 NLGN1Q8N2Q7 840 aa15.61■□□□□ 0.09
NEK3-205ENST00000610828 STAG2Q8N3U4 1231 aa15.61■□□□□ 0.09
NEK3-205ENST00000610828 ZNF579Q8NAF0 562 aaKnown RBP15.61■□□□□ 0.09
NEK3-205ENST00000610828 CSRNP2Q9H175 543 aa15.61■□□□□ 0.09
NEK3-205ENST00000610828 ZNF287Q9HBT7 754 aa15.61■□□□□ 0.09
NEK3-205ENST00000610828 FLT1P17948 1338 aa15.6■□□□□ 0.09
NEK3-205ENST00000610828 FOXN1O15353 648 aa15.6■□□□□ 0.09
NEK3-205ENST00000610828 LRMPQ12912 555 aa15.6■□□□□ 0.09
NEK3-205ENST00000610828 CCDC178Q5BJE1 867 aa15.6■□□□□ 0.09
NEK3-205ENST00000610828 COL23A1Q86Y22 540 aaPredicted RBP15.6■□□□□ 0.09
NEK3-205ENST00000610828 PDILTQ8N807 584 aa15.6■□□□□ 0.09
NEK3-205ENST00000610828 HOOK1Q9UJC3 728 aaKnown RBP15.6■□□□□ 0.09
NEK3-205ENST00000610828 ATP6V0A2Q9Y487 856 aa15.6■□□□□ 0.09
NEK3-205ENST00000610828 GOLGB1Q14789 3259 aaKnown RBP15.6■□□□□ 0.09
NEK3-205ENST00000610828 RASA1P20936 1047 aa15.6■□□□□ 0.09
NEK3-205ENST00000610828 CCDC144BQ3MJ40 725 aa15.6■□□□□ 0.09
NEK3-205ENST00000610828 OLFM4Q6UX06 510 aa15.6■□□□□ 0.09
NEK3-205ENST00000610828 ANKS1AQ92625 1134 aa15.6■□□□□ 0.09
NEK3-205ENST00000610828 TNFRSF25Q93038 417 aa15.6■□□□□ 0.09
NEK3-205ENST00000610828 PCDHA5Q9Y5H7 936 aa15.6■□□□□ 0.09
NEK3-205ENST00000610828 CDK5RAP2Q96SN8 1893 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms