RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 KBTBD4Q9NVX7 518 aa6.93□□□□□ -1.3
SMCHD1-213ENST00000609587 GTF2IRD1Q9UHL9 959 aa6.93□□□□□ -1.3
SMCHD1-213ENST00000609587 LIG3P49916 1009 aa6.92□□□□□ -1.3
SMCHD1-213ENST00000609587 RAD51AP2Q09MP3 1159 aa6.92□□□□□ -1.3
SMCHD1-213ENST00000609587 ZNF394Q53GI3 561 aa6.92□□□□□ -1.3
SMCHD1-213ENST00000609587 AGMOQ6ZNB7 445 aa6.92□□□□□ -1.3
SMCHD1-213ENST00000609587 UBE3DQ7Z6J8 389 aa6.92□□□□□ -1.3
SMCHD1-213ENST00000609587 C20orf173Q96LM9 149 aa6.92□□□□□ -1.3
SMCHD1-213ENST00000609587 TGIF2Q9GZN2 237 aa6.92□□□□□ -1.3
SMCHD1-213ENST00000609587 CCSER2Q9H7U1 834 aa6.92□□□□□ -1.3
SMCHD1-213ENST00000609587 CARS2Q9HA77 564 aaKnown RBP6.92□□□□□ -1.3
SMCHD1-213ENST00000609587 PCDHA4Q9UN74 947 aa6.92□□□□□ -1.3
SMCHD1-213ENST00000609587 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.92□□□□□ -1.3
SMCHD1-213ENST00000609587 PCDHGB7Q9Y5F8 929 aa6.92□□□□□ -1.3
SMCHD1-213ENST00000609587 F6X3S4 739 aa6.91□□□□□ -1.3
SMCHD1-213ENST00000609587 MED14OSP0DP75 135 aa6.91□□□□□ -1.3
SMCHD1-213ENST00000609587 HOXA5P20719 270 aa6.91□□□□□ -1.3
SMCHD1-213ENST00000609587 GBP2P32456 591 aaPredicted RBP6.91□□□□□ -1.3
SMCHD1-213ENST00000609587 ZNF654Q8IZM8 581 aa6.91□□□□□ -1.3
SMCHD1-213ENST00000609587 GAL3ST3Q96A11 431 aa6.91□□□□□ -1.3
SMCHD1-213ENST00000609587 TMEM74Q96NL1 305 aa6.91□□□□□ -1.3
SMCHD1-213ENST00000609587 PRDM10Q9NQV6 1147 aa6.91□□□□□ -1.3
SMCHD1-213ENST00000609587 DDX41Q9UJV9 622 aaKnown RBP6.91□□□□□ -1.3
SMCHD1-213ENST00000609587 MINDY4BA8MYZ0 360 aa6.9□□□□□ -1.3
SMCHD1-213ENST00000609587 FANCGO15287 622 aa6.9□□□□□ -1.3
SMCHD1-213ENST00000609587 NTF4P34130 210 aa6.9□□□□□ -1.3
SMCHD1-213ENST00000609587 GDNFP39905 211 aa6.9□□□□□ -1.3
SMCHD1-213ENST00000609587 RACK1P63244 317 aaKnown RBP6.9□□□□□ -1.3
SMCHD1-213ENST00000609587 PTPN11Q06124 597 aaPredicted RBP6.9□□□□□ -1.3
SMCHD1-213ENST00000609587 CIAPIN1Q6FI81 312 aa6.9□□□□□ -1.3
SMCHD1-213ENST00000609587 ATG14Q6ZNE5 492 aa6.9□□□□□ -1.3
SMCHD1-213ENST00000609587 PHC3Q8NDX5 983 aa6.9□□□□□ -1.3
SMCHD1-213ENST00000609587 SSU72Q9NP77 194 aaKnown RBP6.9□□□□□ -1.3
SMCHD1-213ENST00000609587 LMNB1P20700 586 aa6.89□□□□□ -1.31
SMCHD1-213ENST00000609587 ZC3H6P61129 1189 aaKnown RBP6.89□□□□□ -1.31
SMCHD1-213ENST00000609587 C12orf40Q86WS4 652 aa6.89□□□□□ -1.31
SMCHD1-213ENST00000609587 EPB41L4BQ9H329 900 aa6.89□□□□□ -1.31
SMCHD1-213ENST00000609587 ATP13A1Q9HD20 1204 aa6.89□□□□□ -1.31
SMCHD1-213ENST00000609587 TLR6Q9Y2C9 796 aa6.89□□□□□ -1.31
SMCHD1-213ENST00000609587 SNCAIPQ9Y6H5 919 aa6.89□□□□□ -1.31
SMCHD1-213ENST00000609587 GNAT3A8MTJ3 354 aa6.88□□□□□ -1.31
SMCHD1-213ENST00000609587 DCDC2CA8MYV0 355 aa6.88□□□□□ -1.31
SMCHD1-213ENST00000609587 EOMESO95936 686 aa6.88□□□□□ -1.31
SMCHD1-213ENST00000609587 TMEM253P0C7T8 217 aa6.88□□□□□ -1.31
SMCHD1-213ENST00000609587 TFE3P19532 575 aaPredicted RBP6.88□□□□□ -1.31
SMCHD1-213ENST00000609587 LINC00310P59036 64 aa6.88□□□□□ -1.31
SMCHD1-213ENST00000609587 INPP5AQ14642 412 aa6.88□□□□□ -1.31
SMCHD1-213ENST00000609587 PPM1JQ5JR12 505 aa6.88□□□□□ -1.31
SMCHD1-213ENST00000609587 ZBTB37Q5TC79 503 aa6.88□□□□□ -1.31
SMCHD1-213ENST00000609587 LRFN4Q6PJG9 635 aa6.88□□□□□ -1.31
SMCHD1-213ENST00000609587 HDXQ7Z353 690 aa6.88□□□□□ -1.31
SMCHD1-213ENST00000609587 ELMO3Q96BJ8 720 aa6.88□□□□□ -1.31
SMCHD1-213ENST00000609587 ACBD3Q9H3P7 528 aa6.88□□□□□ -1.31
SMCHD1-213ENST00000609587 DCP1AQ9NPI6 582 aaPredicted RBP6.88□□□□□ -1.31
SMCHD1-213ENST00000609587 PCDHB5Q9Y5E4 795 aa6.88□□□□□ -1.31
SMCHD1-213ENST00000609587 TCAF2A6NFQ2 919 aa6.87□□□□□ -1.31
SMCHD1-213ENST00000609587 ETV2O00321 342 aaPredicted RBP6.87□□□□□ -1.31
SMCHD1-213ENST00000609587 PF4P02776 101 aa6.87□□□□□ -1.31
SMCHD1-213ENST00000609587 GLDCP23378 1020 aa6.87□□□□□ -1.31
SMCHD1-213ENST00000609587 EIF4A3P38919 411 aaKnown RBP6.87□□□□□ -1.31
SMCHD1-213ENST00000609587 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.87□□□□□ -1.31
SMCHD1-213ENST00000609587 CCDC84Q86UT8 332 aaPredicted RBP6.87□□□□□ -1.31
SMCHD1-213ENST00000609587 RHOVQ96L33 236 aa6.87□□□□□ -1.31
SMCHD1-213ENST00000609587 C8orf37Q96NL8 207 aa6.87□□□□□ -1.31
SMCHD1-213ENST00000609587 MIR1-1HGQ9H1L0 117 aa6.87□□□□□ -1.31
SMCHD1-213ENST00000609587 CAPN10Q9HC96 672 aa6.87□□□□□ -1.31
SMCHD1-213ENST00000609587 SEMA3GQ9NS98 782 aa6.87□□□□□ -1.31
SMCHD1-213ENST00000609587 CSADQ9Y600 493 aa6.87□□□□□ -1.31
SMCHD1-213ENST00000609587 GFRA2O00451 464 aa6.86□□□□□ -1.31
SMCHD1-213ENST00000609587 NUAK1O60285 661 aa6.86□□□□□ -1.31
SMCHD1-213ENST00000609587 LMNB2Q03252 620 aa6.86□□□□□ -1.31
SMCHD1-213ENST00000609587 FAM160A1Q05DH4 1040 aa6.86□□□□□ -1.31
SMCHD1-213ENST00000609587 CAMK2GQ13555 558 aaPredicted RBP6.86□□□□□ -1.31
SMCHD1-213ENST00000609587 SEPT6Q14141 434 aa6.86□□□□□ -1.31
SMCHD1-213ENST00000609587 NAALADL2Q58DX5 795 aa6.86□□□□□ -1.31
SMCHD1-213ENST00000609587 SNAP47Q5SQN1 464 aa6.86□□□□□ -1.31
SMCHD1-213ENST00000609587 KCT2Q8NC54 265 aa6.86□□□□□ -1.31
SMCHD1-213ENST00000609587 PLPPR2Q96GM1 343 aa6.86□□□□□ -1.31
SMCHD1-213ENST00000609587 SPON2Q9BUD6 331 aa6.86□□□□□ -1.31
SMCHD1-213ENST00000609587 PRDM5Q9NQX1 630 aaPredicted RBP6.86□□□□□ -1.31
SMCHD1-213ENST00000609587 PICK1Q9NRD5 415 aa6.86□□□□□ -1.31
SMCHD1-213ENST00000609587 ADAMTS1Q9UHI8 967 aa6.86□□□□□ -1.31
SMCHD1-213ENST00000609587 SMG5Q9UPR3 1016 aaKnown RBP6.86□□□□□ -1.31
SMCHD1-213ENST00000609587 TACC3Q9Y6A5 838 aa6.86□□□□□ -1.31
SMCHD1-213ENST00000609587 PRR33A8MZF0 331 aa6.85□□□□□ -1.31
SMCHD1-213ENST00000609587 TNNI2P48788 182 aa6.85□□□□□ -1.31
SMCHD1-213ENST00000609587 KIAA0825Q8IV33 1275 aa6.85□□□□□ -1.31
SMCHD1-213ENST00000609587 ZNF507Q8TCN5 953 aa6.85□□□□□ -1.31
SMCHD1-213ENST00000609587 ZNF296Q8WUU4 475 aaPredicted RBP6.85□□□□□ -1.31
SMCHD1-213ENST00000609587 HSPA12BQ96MM6 686 aa6.85□□□□□ -1.31
SMCHD1-213ENST00000609587 FOXQ1Q9C009 403 aa6.85□□□□□ -1.31
SMCHD1-213ENST00000609587 MAPK8IP1Q9UQF2 711 aa6.85□□□□□ -1.31
SMCHD1-213ENST00000609587 INPP5FQ9Y2H2 1132 aa6.85□□□□□ -1.31
SMCHD1-213ENST00000609587 A0A0G2JLL6 359 aaPredicted RBP6.84□□□□□ -1.31
SMCHD1-213ENST00000609587 CDK8P49336 464 aa6.84□□□□□ -1.31
SMCHD1-213ENST00000609587 KRTAP10-2P60368 255 aa6.84□□□□□ -1.31
SMCHD1-213ENST00000609587 PAK2Q13177 524 aa6.84□□□□□ -1.31
SMCHD1-213ENST00000609587 GNL2Q13823 731 aaKnown RBP6.84□□□□□ -1.31
SMCHD1-213ENST00000609587 WIPI1Q5MNZ9 446 aaPredicted RBP6.84□□□□□ -1.31
SMCHD1-213ENST00000609587 DIEXFQ68CQ4 756 aaKnown RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms