RNA–Protein interactions for RNA: ENST00000608108.1

CTCFL-214, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 1,628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-214ENST00000608108 CEP95Q96GE4 821 aa13.06□□□□□ -0.32
CTCFL-214ENST00000608108 TMX3Q96JJ7 454 aa13.06□□□□□ -0.32
CTCFL-214ENST00000608108 IPO9Q96P70 1041 aaKnown RBP13.06□□□□□ -0.32
CTCFL-214ENST00000608108 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.06□□□□□ -0.32
CTCFL-214ENST00000608108 GLIS2Q9BZE0 524 aaPredicted RBP13.06□□□□□ -0.32
CTCFL-214ENST00000608108 NAP1L2Q9ULW6 460 aaPredicted RBP13.06□□□□□ -0.32
CTCFL-214ENST00000608108 STX8Q9UNK0 236 aa13.06□□□□□ -0.32
CTCFL-214ENST00000608108 OTOFQ9HC10 1997 aa13.06□□□□□ -0.32
CTCFL-214ENST00000608108 IGKV6D-41A0A0C4DH26 115 aa13.06□□□□□ -0.32
CTCFL-214ENST00000608108 LARGE1O95461 756 aa13.06□□□□□ -0.32
CTCFL-214ENST00000608108 GH2P01242 217 aa13.06□□□□□ -0.32
CTCFL-214ENST00000608108 RRP1BQ14684 758 aaKnown RBP13.06□□□□□ -0.32
CTCFL-214ENST00000608108 ME3Q16798 604 aa13.06□□□□□ -0.32
CTCFL-214ENST00000608108 MAP1SQ66K74 1059 aaPredicted RBP13.06□□□□□ -0.32
CTCFL-214ENST00000608108 TMEM179Q6ZVK1 233 aa13.06□□□□□ -0.32
CTCFL-214ENST00000608108 SGMS1Q86VZ5 419 aa13.06□□□□□ -0.32
CTCFL-214ENST00000608108 DGKHQ86XP1 1220 aa13.06□□□□□ -0.32
CTCFL-214ENST00000608108 CLEC10AQ8IUN9 316 aa13.06□□□□□ -0.32
CTCFL-214ENST00000608108 TMTC2Q8N394 836 aa13.06□□□□□ -0.32
CTCFL-214ENST00000608108 ZSCAN31Q96LW9 406 aaPredicted RBP13.06□□□□□ -0.32
CTCFL-214ENST00000608108 ZNF341Q9BYN7 854 aa13.06□□□□□ -0.32
CTCFL-214ENST00000608108 CABP5Q9NP86 173 aa13.06□□□□□ -0.32
CTCFL-214ENST00000608108 SH2B1Q9NRF2 756 aaPredicted RBP13.06□□□□□ -0.32
CTCFL-214ENST00000608108 DAXXQ9UER7 740 aaPredicted RBP13.06□□□□□ -0.32
CTCFL-214ENST00000608108 BRPF3Q9ULD4 1205 aa13.06□□□□□ -0.32
CTCFL-214ENST00000608108 SLC12A7Q9Y666 1083 aa13.06□□□□□ -0.32
CTCFL-214ENST00000608108 GOLGA8BA8MQT2 603 aa13.05□□□□□ -0.32
CTCFL-214ENST00000608108 PHF20L1A8MW92 1017 aa13.05□□□□□ -0.32
CTCFL-214ENST00000608108 EVCP57679 992 aa13.05□□□□□ -0.32
CTCFL-214ENST00000608108 RAB3GAP1Q15042 981 aa13.05□□□□□ -0.32
CTCFL-214ENST00000608108 RCSD1Q6JBY9 416 aa13.05□□□□□ -0.32
CTCFL-214ENST00000608108 MTMR4Q9NYA4 1195 aa13.05□□□□□ -0.32
CTCFL-214ENST00000608108 ZBTB21Q9ULJ3 1066 aa13.05□□□□□ -0.32
CTCFL-214ENST00000608108 PAPPA2Q9BXP8 1791 aa13.05□□□□□ -0.32
CTCFL-214ENST00000608108 TTLL1O95922 423 aa13.04□□□□□ -0.32
CTCFL-214ENST00000608108 NF2P35240 595 aa13.04□□□□□ -0.32
CTCFL-214ENST00000608108 CAP2P40123 477 aa13.04□□□□□ -0.32
CTCFL-214ENST00000608108 SLC4A3P48751 1232 aa13.04□□□□□ -0.32
CTCFL-214ENST00000608108 JAG1P78504 1218 aa13.04□□□□□ -0.32
CTCFL-214ENST00000608108 STK3Q13188 491 aa13.04□□□□□ -0.32
CTCFL-214ENST00000608108 SEPT2Q15019 361 aa13.04□□□□□ -0.32
CTCFL-214ENST00000608108 PPP4R3BQ5MIZ7 849 aa13.04□□□□□ -0.32
CTCFL-214ENST00000608108 APOA5Q6Q788 366 aa13.04□□□□□ -0.32
CTCFL-214ENST00000608108 MICU3Q86XE3 530 aa13.04□□□□□ -0.32
CTCFL-214ENST00000608108 RAB11FIP4Q86YS3 637 aa13.04□□□□□ -0.32
CTCFL-214ENST00000608108 ANKS1AQ92625 1134 aa13.04□□□□□ -0.32
CTCFL-214ENST00000608108 ZNF274Q96GC6 653 aaPredicted RBP13.04□□□□□ -0.32
CTCFL-214ENST00000608108 WRNIP1Q96S55 665 aa13.04□□□□□ -0.32
CTCFL-214ENST00000608108 KAT14Q9H8E8 782 aa13.04□□□□□ -0.32
CTCFL-214ENST00000608108 KANSL2Q9H9L4 492 aa13.04□□□□□ -0.32
CTCFL-214ENST00000608108 GPBP1L1Q9HC44 474 aaPredicted RBP13.04□□□□□ -0.32
CTCFL-214ENST00000608108 FZD1Q9UP38 647 aa13.04□□□□□ -0.32
CTCFL-214ENST00000608108 ZBTB43O43298 467 aa13.03□□□□□ -0.32
CTCFL-214ENST00000608108 CTNND1O60716 968 aaKnown RBP13.03□□□□□ -0.32
CTCFL-214ENST00000608108 HSP90AA1P07900 732 aaKnown RBP13.03□□□□□ -0.32
CTCFL-214ENST00000608108 PDIA3P30101 505 aaKnown RBP13.03□□□□□ -0.32
CTCFL-214ENST00000608108 GUCY1A2P33402 732 aa13.03□□□□□ -0.32
CTCFL-214ENST00000608108 ICA1Q05084 483 aa13.03□□□□□ -0.32
CTCFL-214ENST00000608108 PRKG1Q13976 671 aa13.03□□□□□ -0.32
CTCFL-214ENST00000608108 SYNE3Q6ZMZ3 975 aa13.03□□□□□ -0.32
CTCFL-214ENST00000608108 CATIPQ7Z7H3 387 aa13.03□□□□□ -0.32
CTCFL-214ENST00000608108 ZNF654Q8IZM8 581 aa13.03□□□□□ -0.32
CTCFL-214ENST00000608108 TMEM47Q9BQJ4 181 aa13.03□□□□□ -0.32
CTCFL-214ENST00000608108 MYL10Q9BUA6 226 aa13.03□□□□□ -0.32
CTCFL-214ENST00000608108 SLKQ9H2G2 1235 aaPredicted RBP13.03□□□□□ -0.32
CTCFL-214ENST00000608108 PPP1R12BO60237 982 aaPredicted RBP13.02□□□□□ -0.32
CTCFL-214ENST00000608108 PFKFB2O60825 505 aa13.02□□□□□ -0.32
CTCFL-214ENST00000608108 ASNSP08243 561 aa13.02□□□□□ -0.32
CTCFL-214ENST00000608108 TOP1P11387 765 aaKnown RBP13.02□□□□□ -0.32
CTCFL-214ENST00000608108 RXRAP19793 462 aa13.02□□□□□ -0.32
CTCFL-214ENST00000608108 INPP5BP32019 993 aa13.02□□□□□ -0.32
CTCFL-214ENST00000608108 NOVP48745 357 aa13.02□□□□□ -0.32
CTCFL-214ENST00000608108 METAP2P50579 478 aaKnown RBP eCLIP13.02□□□□□ -0.323e-6■□□□□ 9.1
CTCFL-214ENST00000608108 CCT2P78371 535 aaKnown RBP13.02□□□□□ -0.32
CTCFL-214ENST00000608108 ATP2B2Q01814 1243 aa13.02□□□□□ -0.32
CTCFL-214ENST00000608108 CCDC83Q8IWF9 413 aa13.02□□□□□ -0.32
CTCFL-214ENST00000608108 NECAB1Q8N987 351 aa13.02□□□□□ -0.32
CTCFL-214ENST00000608108 PNMA1Q8ND90 353 aa13.02□□□□□ -0.32
CTCFL-214ENST00000608108 NUP133Q8WUM0 1156 aa13.02□□□□□ -0.32
CTCFL-214ENST00000608108 GTF3C6Q969F1 213 aa13.02□□□□□ -0.32
CTCFL-214ENST00000608108 KLRG1Q96E93 195 aa13.02□□□□□ -0.32
CTCFL-214ENST00000608108 ZNF112Q9UJU3 913 aa13.02□□□□□ -0.32
CTCFL-214ENST00000608108 HPS5Q9UPZ3 1129 aa13.02□□□□□ -0.32
CTCFL-214ENST00000608108 TRAF5O00463 557 aa13.02□□□□□ -0.33
CTCFL-214ENST00000608108 DDAH1O94760 285 aa13.02□□□□□ -0.33
CTCFL-214ENST00000608108 EEF2P13639 858 aaKnown RBP13.02□□□□□ -0.33
CTCFL-214ENST00000608108 RCAN1P53805 252 aa13.02□□□□□ -0.33
CTCFL-214ENST00000608108 SCRN1Q12765 414 aa13.02□□□□□ -0.33
CTCFL-214ENST00000608108 CCDC144CPQ8IYA2 1237 aa13.02□□□□□ -0.33
CTCFL-214ENST00000608108 LRRC47Q8N1G4 583 aaKnown RBP13.02□□□□□ -0.33
CTCFL-214ENST00000608108 SPRYD3Q8NCJ5 442 aa13.02□□□□□ -0.33
CTCFL-214ENST00000608108 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.02□□□□□ -0.33
CTCFL-214ENST00000608108 CLIP2Q9UDT6 1046 aa13.02□□□□□ -0.33
CTCFL-214ENST00000608108 TRPM7Q96QT4 1865 aa13.01□□□□□ -0.33
CTCFL-214ENST00000608108 GOLGA8AA7E2F4 631 aa13.01□□□□□ -0.33
CTCFL-214ENST00000608108 USP2O75604 605 aaPredicted RBP13.01□□□□□ -0.33
CTCFL-214ENST00000608108 ST3GAL1Q11201 340 aa13.01□□□□□ -0.33
CTCFL-214ENST00000608108 TROAPQ12815 778 aa13.01□□□□□ -0.33
CTCFL-214ENST00000608108 CUL4AQ13619 759 aa13.01□□□□□ -0.33
CTCFL-214ENST00000608108 TTLL12Q14166 644 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms