RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 USP17L19D6RCP7 530 aa23.03■■□□□ 1.28
CTSA-217ENST00000607482 USP17L20D6RJB6 530 aa23.03■■□□□ 1.28
CTSA-217ENST00000607482 FLT3LGP49771 235 aa23.03■■□□□ 1.28
CTSA-217ENST00000607482 HERVK_113P62684 666 aa23.03■■□□□ 1.28
CTSA-217ENST00000607482 GABPAQ06546 454 aa23.03■■□□□ 1.28
CTSA-217ENST00000607482 USP17L24Q0WX57 530 aa23.03■■□□□ 1.28
CTSA-217ENST00000607482 HDAC1Q13547 482 aaPredicted RBP23.03■■□□□ 1.28
CTSA-217ENST00000607482 C12orf60Q5U649 245 aa23.03■■□□□ 1.28
CTSA-217ENST00000607482 TMEM179Q6ZVK1 233 aa23.03■■□□□ 1.28
CTSA-217ENST00000607482 SLC44A5Q8NCS7 719 aa23.03■■□□□ 1.28
CTSA-217ENST00000607482 PAGR1Q9BTK6 254 aa23.03■■□□□ 1.28
CTSA-217ENST00000607482 KIAA1683Q9H0B3 1180 aa23.03■■□□□ 1.28
CTSA-217ENST00000607482 CENPFP49454 3210 aa23.03■■□□□ 1.28
CTSA-217ENST00000607482 ZSWIM8A7E2V4 1837 aa23.03■■□□□ 1.28
CTSA-217ENST00000607482 CYP2D7A0A087X1C5 515 aa23.02■■□□□ 1.28
CTSA-217ENST00000607482 ADCY3O60266 1144 aa23.02■■□□□ 1.28
CTSA-217ENST00000607482 GNAT2P19087 354 aa23.02■■□□□ 1.28
CTSA-217ENST00000607482 EN2P19622 333 aaPredicted RBP23.02■■□□□ 1.28
CTSA-217ENST00000607482 ACER1Q8TDN7 264 aa23.02■■□□□ 1.28
CTSA-217ENST00000607482 OTUD7AQ8TE49 926 aaPredicted RBP23.02■■□□□ 1.28
CTSA-217ENST00000607482 STRBPQ96SI9 672 aaKnown RBP23.02■■□□□ 1.28
CTSA-217ENST00000607482 SH2D4AQ9H788 454 aa23.02■■□□□ 1.28
CTSA-217ENST00000607482 ARHGEF10LQ9HCE6 1279 aa23.02■■□□□ 1.28
CTSA-217ENST00000607482 ARPP21Q9UBL0 812 aaPredicted RBP23.02■■□□□ 1.28
CTSA-217ENST00000607482 GABRQQ9UN88 632 aa23.02■■□□□ 1.28
CTSA-217ENST00000607482 LOC285556D6RIA3 1793 aa23.01■■□□□ 1.27
CTSA-217ENST00000607482 MINDY4BA8MYZ0 360 aa23.01■■□□□ 1.27
CTSA-217ENST00000607482 TDO2P48775 406 aa23.01■■□□□ 1.27
CTSA-217ENST00000607482 ATP2B2Q01814 1243 aa23.01■■□□□ 1.27
CTSA-217ENST00000607482 EVX2Q03828 476 aa23.01■■□□□ 1.27
CTSA-217ENST00000607482 CCDC17Q96LX7 622 aa23.01■■□□□ 1.27
CTSA-217ENST00000607482 NACAP1Q9BZK3 213 aa23.01■■□□□ 1.27
CTSA-217ENST00000607482 CDK8P49336 464 aa23■■□□□ 1.27
CTSA-217ENST00000607482 CTR9Q6PD62 1173 aa23■■□□□ 1.27
CTSA-217ENST00000607482 MKNK2Q9HBH9 465 aa23■■□□□ 1.27
CTSA-217ENST00000607482 GPAA1O43292 621 aa22.99■■□□□ 1.27
CTSA-217ENST00000607482 STK11IPQ8N1F8 1099 aa22.99■■□□□ 1.27
CTSA-217ENST00000607482 PI4K2BQ8TCG2 481 aa22.99■■□□□ 1.27
CTSA-217ENST00000607482 OSBP2Q969R2 916 aa22.99■■□□□ 1.27
CTSA-217ENST00000607482 C12orf42Q96LP6 360 aa22.99■■□□□ 1.27
CTSA-217ENST00000607482 TANGO6Q9C0B7 1094 aa22.99■■□□□ 1.27
CTSA-217ENST00000607482 RNF208Q9H0X6 261 aa22.99■■□□□ 1.27
CTSA-217ENST00000607482 MYH7P12883 1935 aa22.99■■□□□ 1.27
CTSA-217ENST00000607482 RAD21O60216 631 aa22.98■■□□□ 1.27
CTSA-217ENST00000607482 AKR1B1P15121 316 aa22.98■■□□□ 1.27
CTSA-217ENST00000607482 ELNP15502 786 aa22.98■■□□□ 1.27
CTSA-217ENST00000607482 VCAM1P19320 739 aa22.98■■□□□ 1.27
CTSA-217ENST00000607482 CCNA1P78396 465 aa22.98■■□□□ 1.27
CTSA-217ENST00000607482 ICA1Q05084 483 aa22.98■■□□□ 1.27
CTSA-217ENST00000607482 WDR78Q5VTH9 848 aa22.98■■□□□ 1.27
CTSA-217ENST00000607482 B4GALNT3Q6L9W6 998 aa22.98■■□□□ 1.27
CTSA-217ENST00000607482 GIMAP6Q6P9H5 292 aa22.98■■□□□ 1.27
CTSA-217ENST00000607482 C16orf86Q6ZW13 317 aa22.98■■□□□ 1.27
CTSA-217ENST00000607482 NKX2-3Q8TAU0 364 aa22.98■■□□□ 1.27
CTSA-217ENST00000607482 RPAP3Q9H6T3 665 aaPredicted RBP22.98■■□□□ 1.27
CTSA-217ENST00000607482 ZNF287Q9HBT7 754 aa22.98■■□□□ 1.27
CTSA-217ENST00000607482 MORF4L1Q9UBU8 362 aa22.98■■□□□ 1.27
CTSA-217ENST00000607482 CCL5P13501 91 aa22.97■■□□□ 1.27
CTSA-217ENST00000607482 MAPK4P31152 587 aa22.97■■□□□ 1.27
CTSA-217ENST00000607482 IRF5Q13568 498 aa22.97■■□□□ 1.27
CTSA-217ENST00000607482 MTFR1Q15390 333 aa22.97■■□□□ 1.27
CTSA-217ENST00000607482 GUCY1A2P33402 732 aa22.96■■□□□ 1.27
CTSA-217ENST00000607482 ERVK-9P63128 1117 aa22.96■■□□□ 1.27
CTSA-217ENST00000607482 ERVK-24P63145 666 aa22.96■■□□□ 1.27
CTSA-217ENST00000607482 CATSPERGQ6ZRH7 1159 aa22.96■■□□□ 1.27
CTSA-217ENST00000607482 PXYLP1Q8TE99 480 aa22.96■■□□□ 1.27
CTSA-217ENST00000607482 RBPJLQ9UBG7 517 aa22.96■■□□□ 1.27
CTSA-217ENST00000607482 SUPT16HQ9Y5B9 1047 aaKnown RBP22.96■■□□□ 1.27
CTSA-217ENST00000607482 DDX60LQ5H9U9 1706 aaKnown RBP22.96■■□□□ 1.27
CTSA-217ENST00000607482 MGAMO43451 1857 aa22.96■■□□□ 1.27
CTSA-217ENST00000607482 GSG1L2A8MUP6 293 aa22.95■■□□□ 1.26
CTSA-217ENST00000607482 M0R2C6 588 aa22.95■■□□□ 1.26
CTSA-217ENST00000607482 INHAP05111 366 aa22.95■■□□□ 1.26
CTSA-217ENST00000607482 SLC3A2P08195 630 aaKnown RBP22.95■■□□□ 1.26
CTSA-217ENST00000607482 SAMD1Q6SPF0 538 aaPredicted RBP22.95■■□□□ 1.26
CTSA-217ENST00000607482 EXOC6Q8TAG9 804 aa22.95■■□□□ 1.26
CTSA-217ENST00000607482 EVI5LQ96CN4 794 aa22.95■■□□□ 1.26
CTSA-217ENST00000607482 NUDT12Q9BQG2 462 aa22.95■■□□□ 1.26
CTSA-217ENST00000607482 LNPKQ9C0E8 428 aa22.95■■□□□ 1.26
CTSA-217ENST00000607482 KANSL2Q9H9L4 492 aa22.95■■□□□ 1.26
CTSA-217ENST00000607482 TXNRD2Q9NNW7 524 aa22.95■■□□□ 1.26
CTSA-217ENST00000607482 HOXC10Q9NYD6 342 aa22.95■■□□□ 1.26
CTSA-217ENST00000607482 RABGAP1Q9Y3P9 1069 aa22.95■■□□□ 1.26
CTSA-217ENST00000607482 KIAA0100Q14667 2235 aaKnown RBP22.94■■□□□ 1.26
CTSA-217ENST00000607482 BAZ2AQ9UIF9 1905 aaKnown RBP22.94■■□□□ 1.26
CTSA-217ENST00000607482 PATL2C9JE40 543 aaKnown RBP22.94■■□□□ 1.26
CTSA-217ENST00000607482 PEX10O60683 326 aa22.94■■□□□ 1.26
CTSA-217ENST00000607482 SBK1Q52WX2 424 aa22.94■■□□□ 1.26
CTSA-217ENST00000607482 ZNF444Q8N0Y2 327 aaPredicted RBP22.94■■□□□ 1.26
CTSA-217ENST00000607482 SOCS4Q8WXH5 440 aa22.94■■□□□ 1.26
CTSA-217ENST00000607482 LPAR1Q92633 364 aa22.94■■□□□ 1.26
CTSA-217ENST00000607482 A0A1W2PRG0 241 aa22.93■■□□□ 1.26
CTSA-217ENST00000607482 TRIM6-TRIM34B2RNG4 842 aa22.93■■□□□ 1.26
CTSA-217ENST00000607482 CYP2B6P20813 491 aa22.93■■□□□ 1.26
CTSA-217ENST00000607482 PDE1AP54750 535 aa22.93■■□□□ 1.26
CTSA-217ENST00000607482 COG2Q14746 738 aa22.93■■□□□ 1.26
CTSA-217ENST00000607482 SPICE1Q8N0Z3 855 aa22.93■■□□□ 1.26
CTSA-217ENST00000607482 NAPBQ9H115 298 aa22.93■■□□□ 1.26
CTSA-217ENST00000607482 GOPCQ9HD26 462 aa22.93■■□□□ 1.26
CTSA-217ENST00000607482 IVNS1ABPQ9Y6Y0 642 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms