RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 Q3C1V9 767 aa18.06■□□□□ 0.48
CTSA-216ENST00000607212 CEP85Q6P2H3 762 aa18.06■□□□□ 0.48
CTSA-216ENST00000607212 GPR142Q7Z601 462 aa18.06■□□□□ 0.48
CTSA-216ENST00000607212 METTL16Q86W50 562 aaKnown RBP18.06■□□□□ 0.48
CTSA-216ENST00000607212 PORCNQ9H237 461 aa18.06■□□□□ 0.48
CTSA-216ENST00000607212 IL1RAPL2Q9NP60 686 aa18.06■□□□□ 0.48
CTSA-216ENST00000607212 MAGEB6P1A0A0J9YX57 407 aa18.05■□□□□ 0.48
CTSA-216ENST00000607212 SYN1P17600 705 aa18.05■□□□□ 0.48
CTSA-216ENST00000607212 HSP90AB4PQ58FF6 505 aa18.05■□□□□ 0.48
CTSA-216ENST00000607212 A0A1W2PPC1 479 aa18.04■□□□□ 0.48
CTSA-216ENST00000607212 XRCC5P13010 732 aaKnown RBP18.04■□□□□ 0.48
CTSA-216ENST00000607212 TTF1Q15361 905 aaPredicted RBP18.04■□□□□ 0.48
CTSA-216ENST00000607212 PANK1Q8TE04 598 aa18.04■□□□□ 0.48
CTSA-216ENST00000607212 DNAJC2Q99543 621 aaKnown RBP18.04■□□□□ 0.48
CTSA-216ENST00000607212 APBA2Q99767 749 aa18.04■□□□□ 0.48
CTSA-216ENST00000607212 IVNS1ABPQ9Y6Y0 642 aa18.04■□□□□ 0.48
CTSA-216ENST00000607212 CACNB2Q08289 660 aaPredicted RBP18.03■□□□□ 0.48
CTSA-216ENST00000607212 CCL14Q16627 93 aa18.03■□□□□ 0.48
CTSA-216ENST00000607212 TATDN1Q6P1N9 297 aa18.03■□□□□ 0.48
CTSA-216ENST00000607212 CRNKL1Q9BZJ0 848 aaKnown RBP18.03■□□□□ 0.48
CTSA-216ENST00000607212 EHD4Q9H223 541 aa18.03■□□□□ 0.48
CTSA-216ENST00000607212 PRO3102Q9H379 93 aa18.03■□□□□ 0.48
CTSA-216ENST00000607212 OGDHLQ9ULD0 1010 aa18.03■□□□□ 0.48
CTSA-216ENST00000607212 RABGAP1Q9Y3P9 1069 aa18.03■□□□□ 0.48
CTSA-216ENST00000607212 IFIT2P09913 472 aaKnown RBP18.02■□□□□ 0.48
CTSA-216ENST00000607212 CNGA1P29973 690 aa18.02■□□□□ 0.48
CTSA-216ENST00000607212 CCND3P30281 292 aaPredicted RBP18.02■□□□□ 0.48
CTSA-216ENST00000607212 MAP2K5Q13163 448 aa18.02■□□□□ 0.48
CTSA-216ENST00000607212 SLC9C2Q5TAH2 1124 aa18.02■□□□□ 0.48
CTSA-216ENST00000607212 MFSD14CQ5VZR4 134 aa18.02■□□□□ 0.48
CTSA-216ENST00000607212 CLASRPQ8N2M8 674 aaKnown RBP18.02■□□□□ 0.48
CTSA-216ENST00000607212 ACER1Q8TDN7 264 aa18.02■□□□□ 0.48
CTSA-216ENST00000607212 MCM9Q9NXL9 1143 aa18.02■□□□□ 0.48
CTSA-216ENST00000607212 MYH8P13535 1937 aa18.02■□□□□ 0.47
CTSA-216ENST00000607212 GOLIM4O00461 696 aa18.01■□□□□ 0.47
CTSA-216ENST00000607212 VCAM1P19320 739 aa18.01■□□□□ 0.47
CTSA-216ENST00000607212 PLCD1P51178 756 aa18.01■□□□□ 0.47
CTSA-216ENST00000607212 MAP3K21Q5TCX8 1036 aa18.01■□□□□ 0.47
CTSA-216ENST00000607212 CATSPERGQ6ZRH7 1159 aa18.01■□□□□ 0.47
CTSA-216ENST00000607212 RHPN1Q8TCX5 695 aa18.01■□□□□ 0.47
CTSA-216ENST00000607212 EDC3Q96F86 508 aaKnown RBP18.01■□□□□ 0.47
CTSA-216ENST00000607212 LRCH3Q96II8 777 aa18.01■□□□□ 0.47
CTSA-216ENST00000607212 C12orf42Q96LP6 360 aa18.01■□□□□ 0.47
CTSA-216ENST00000607212 RPAP3Q9H6T3 665 aaPredicted RBP18.01■□□□□ 0.47
CTSA-216ENST00000607212 HMMRO75330 724 aa18■□□□□ 0.47
CTSA-216ENST00000607212 MS4A1P11836 297 aa18■□□□□ 0.47
CTSA-216ENST00000607212 PDE6AP16499 860 aa18■□□□□ 0.47
CTSA-216ENST00000607212 ATP2B2Q01814 1243 aa18■□□□□ 0.47
CTSA-216ENST00000607212 SEPT2Q15019 361 aa18■□□□□ 0.47
CTSA-216ENST00000607212 MORN1Q5T089 497 aa18■□□□□ 0.47
CTSA-216ENST00000607212 TMED8Q6PL24 325 aaPredicted RBP18■□□□□ 0.47
CTSA-216ENST00000607212 SAMD1Q6SPF0 538 aaPredicted RBP18■□□□□ 0.47
CTSA-216ENST00000607212 MIER1Q8N108 512 aa18■□□□□ 0.47
CTSA-216ENST00000607212 TANGO6Q9C0B7 1094 aa18■□□□□ 0.47
CTSA-216ENST00000607212 KIAA1683Q9H0B3 1180 aa18■□□□□ 0.47
CTSA-216ENST00000607212 SOX1O00570 391 aaPredicted RBP17.99■□□□□ 0.47
CTSA-216ENST00000607212 SHMT1P34896 483 aa17.99■□□□□ 0.47
CTSA-216ENST00000607212 RIOK1Q9BRS2 568 aaKnown RBP17.99■□□□□ 0.47
CTSA-216ENST00000607212 UBE2OQ9C0C9 1292 aaKnown RBP17.99■□□□□ 0.47
CTSA-216ENST00000607212 ZNF532Q9HCE3 1301 aa17.98■□□□□ 0.47
CTSA-216ENST00000607212 SLC15A5A6NIM6 579 aa17.98■□□□□ 0.47
CTSA-216ENST00000607212 CNMDO75829 334 aa17.98■□□□□ 0.47
CTSA-216ENST00000607212 MAGEA10P43363 369 aaPredicted RBP17.98■□□□□ 0.47
CTSA-216ENST00000607212 DPP9Q86TI2 863 aa17.98■□□□□ 0.47
CTSA-216ENST00000607212 SDR42E1Q8WUS8 393 aa17.98■□□□□ 0.47
CTSA-216ENST00000607212 USP6NLQ92738 828 aa17.98■□□□□ 0.47
CTSA-216ENST00000607212 KIF1BPQ96EK5 621 aa17.98■□□□□ 0.47
CTSA-216ENST00000607212 FRMPD3Q5JV73 1810 aa17.98■□□□□ 0.47
CTSA-216ENST00000607212 PFASO15067 1338 aa17.98■□□□□ 0.47
CTSA-216ENST00000607212 MYCNP04198 464 aaPredicted RBP17.97■□□□□ 0.47
CTSA-216ENST00000607212 PTPREP23469 700 aa17.97■□□□□ 0.47
CTSA-216ENST00000607212 MNX1P50219 401 aaPredicted RBP17.97■□□□□ 0.47
CTSA-216ENST00000607212 PLS1Q14651 629 aa17.97■□□□□ 0.47
CTSA-216ENST00000607212 AMOTL1Q8IY63 956 aa17.97■□□□□ 0.47
CTSA-216ENST00000607212 GDF15Q99988 308 aa17.97■□□□□ 0.47
CTSA-216ENST00000607212 BTBD7Q9P203 1132 aa17.97■□□□□ 0.47
CTSA-216ENST00000607212 SPDYE16A6NNV3 312 aaPredicted RBP17.96■□□□□ 0.47
CTSA-216ENST00000607212 CYP2D6P10635 497 aa17.96■□□□□ 0.47
CTSA-216ENST00000607212 BMP8BP34820 402 aa17.96■□□□□ 0.47
CTSA-216ENST00000607212 POTEEQ6S8J3 1075 aa17.96■□□□□ 0.47
CTSA-216ENST00000607212 LCORLQ8N3X6 602 aa17.96■□□□□ 0.47
CTSA-216ENST00000607212 SLC17A8Q8NDX2 589 aa17.96■□□□□ 0.47
CTSA-216ENST00000607212 SENP6Q9GZR1 1112 aaPredicted RBP17.96■□□□□ 0.47
CTSA-216ENST00000607212 ARMT1Q9H993 441 aa17.96■□□□□ 0.47
CTSA-216ENST00000607212 GUCY1A2P33402 732 aa17.95■□□□□ 0.46
CTSA-216ENST00000607212 MDM2Q00987 491 aaPredicted RBP17.95■□□□□ 0.46
CTSA-216ENST00000607212 DIEXFQ68CQ4 756 aaKnown RBP17.95■□□□□ 0.46
CTSA-216ENST00000607212 DDRGK1Q96HY6 314 aa17.95■□□□□ 0.46
CTSA-216ENST00000607212 BOLA2Q9H3K6 86 aa17.95■□□□□ 0.46
CTSA-216ENST00000607212 ARHGEF10LQ9HCE6 1279 aa17.95■□□□□ 0.46
CTSA-216ENST00000607212 HOXC10Q9NYD6 342 aa17.95■□□□□ 0.46
CTSA-216ENST00000607212 FLRT1Q9NZU1 646 aa17.95■□□□□ 0.46
CTSA-216ENST00000607212 DDX20Q9UHI6 824 aaKnown RBP17.95■□□□□ 0.46
CTSA-216ENST00000607212 COG6Q9Y2V7 657 aa17.95■□□□□ 0.46
CTSA-216ENST00000607212 BAZ2AQ9UIF9 1905 aaKnown RBP17.94■□□□□ 0.46
CTSA-216ENST00000607212 RAD21O60216 631 aa17.94■□□□□ 0.46
CTSA-216ENST00000607212 CYP2C19P33261 490 aa17.94■□□□□ 0.46
CTSA-216ENST00000607212 ATN1P54259 1190 aaPredicted RBP17.94■□□□□ 0.46
CTSA-216ENST00000607212 EVX2Q03828 476 aa17.94■□□□□ 0.46
CTSA-216ENST00000607212 GRB14Q14449 540 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms