RNA–Protein interactions for RNA: ENST00000607187.1

CTSA-215, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-215ENST00000607187 TRIM75PA6NK02 468 aa12.01□□□□□ -0.49
CTSA-215ENST00000607187 RNF113AO15541 343 aaKnown RBP12.01□□□□□ -0.49
CTSA-215ENST00000607187 PRKAB2O43741 272 aa12.01□□□□□ -0.49
CTSA-215ENST00000607187 POLR3DP05423 398 aaPredicted RBP12.01□□□□□ -0.49
CTSA-215ENST00000607187 JAG1P78504 1218 aa12.01□□□□□ -0.49
CTSA-215ENST00000607187 SP3Q02447 781 aa12.01□□□□□ -0.49
CTSA-215ENST00000607187 GABPAQ06546 454 aa12.01□□□□□ -0.49
CTSA-215ENST00000607187 SPP2Q13103 211 aa12.01□□□□□ -0.49
CTSA-215ENST00000607187 MAP2K5Q13163 448 aa12.01□□□□□ -0.49
CTSA-215ENST00000607187 SHROOM1Q2M3G4 852 aaPredicted RBP12.01□□□□□ -0.49
CTSA-215ENST00000607187 ERO1AQ96HE7 468 aa12.01□□□□□ -0.49
CTSA-215ENST00000607187 WDR18Q9BV38 432 aa12.01□□□□□ -0.49
CTSA-215ENST00000607187 MCM9Q9NXL9 1143 aa12.01□□□□□ -0.49
CTSA-215ENST00000607187 STAP2Q9UGK3 403 aa12.01□□□□□ -0.49
CTSA-215ENST00000607187 MGAMO43451 1857 aa12.01□□□□□ -0.49
CTSA-215ENST00000607187 GDF11O95390 407 aa12□□□□□ -0.49
CTSA-215ENST00000607187 ZFYP08048 801 aaPredicted RBP12□□□□□ -0.49
CTSA-215ENST00000607187 SHMT1P34896 483 aa12□□□□□ -0.49
CTSA-215ENST00000607187 PDE1AP54750 535 aa12□□□□□ -0.49
CTSA-215ENST00000607187 CAP1Q01518 475 aa12□□□□□ -0.49
CTSA-215ENST00000607187 APPBP2Q92624 585 aa12□□□□□ -0.49
CTSA-215ENST00000607187 AS3MTQ9HBK9 375 aa12□□□□□ -0.49
CTSA-215ENST00000607187 ZBTB21Q9ULJ3 1066 aa12□□□□□ -0.49
CTSA-215ENST00000607187 TRPC6Q9Y210 931 aa12□□□□□ -0.49
CTSA-215ENST00000607187 SLC45A1Q9Y2W3 748 aa12□□□□□ -0.49
CTSA-215ENST00000607187 ADGRA2Q96PE1 1338 aa12□□□□□ -0.49
CTSA-215ENST00000607187 ZSWIM8A7E2V4 1837 aa12□□□□□ -0.49
CTSA-215ENST00000607187 DOCK3Q8IZD9 2030 aa11.99□□□□□ -0.49
CTSA-215ENST00000607187 EVX2Q03828 476 aa11.99□□□□□ -0.49
CTSA-215ENST00000607187 AMHR2Q16671 573 aa11.99□□□□□ -0.49
CTSA-215ENST00000607187 LRRFIP1Q32MZ4 808 aaKnown RBP11.99□□□□□ -0.49
CTSA-215ENST00000607187 CERKLQ49MI3 558 aaPredicted RBP11.99□□□□□ -0.49
CTSA-215ENST00000607187 SH3D19Q5HYK7 790 aa11.99□□□□□ -0.49
CTSA-215ENST00000607187 C17orf99Q6UX52 265 aa11.99□□□□□ -0.49
CTSA-215ENST00000607187 GADL1Q6ZQY3 521 aa11.99□□□□□ -0.49
CTSA-215ENST00000607187 PROCA1Q8NCQ7 364 aaPredicted RBP11.99□□□□□ -0.49
CTSA-215ENST00000607187 CD99L2Q8TCZ2 262 aa11.99□□□□□ -0.49
CTSA-215ENST00000607187 OSBP2Q969R2 916 aa11.99□□□□□ -0.49
CTSA-215ENST00000607187 STRBPQ96SI9 672 aaKnown RBP11.99□□□□□ -0.49
CTSA-215ENST00000607187 PARK7Q99497 189 aaKnown RBP11.99□□□□□ -0.49
CTSA-215ENST00000607187 LNPKQ9C0E8 428 aa11.99□□□□□ -0.49
CTSA-215ENST00000607187 AGTPBP1Q9UPW5 1226 aa11.99□□□□□ -0.49
CTSA-215ENST00000607187 TRIM17Q9Y577 477 aa11.99□□□□□ -0.49
CTSA-215ENST00000607187 SLC4A4Q9Y6R1 1079 aa11.99□□□□□ -0.49
CTSA-215ENST00000607187 GH2P01242 217 aa11.98□□□□□ -0.49
CTSA-215ENST00000607187 CYP2C8P10632 490 aa11.98□□□□□ -0.49
CTSA-215ENST00000607187 CYP2D6P10635 497 aa11.98□□□□□ -0.49
CTSA-215ENST00000607187 HMGCS2P54868 508 aa11.98□□□□□ -0.49
CTSA-215ENST00000607187 BACE1P56817 501 aa11.98□□□□□ -0.49
CTSA-215ENST00000607187 NUCB1Q02818 461 aa11.98□□□□□ -0.49
CTSA-215ENST00000607187 TREML2Q5T2D2 321 aa11.98□□□□□ -0.49
CTSA-215ENST00000607187 C12orf60Q5U649 245 aa11.98□□□□□ -0.49
CTSA-215ENST00000607187 B4GALNT3Q6L9W6 998 aa11.98□□□□□ -0.49
CTSA-215ENST00000607187 FBXO46Q6PJ61 603 aaPredicted RBP11.98□□□□□ -0.49
CTSA-215ENST00000607187 OTOP1Q7RTM1 612 aa11.98□□□□□ -0.49
CTSA-215ENST00000607187 CHD1LQ86WJ1 897 aa11.98□□□□□ -0.49
CTSA-215ENST00000607187 PARP9Q8IXQ6 854 aa11.98□□□□□ -0.49
CTSA-215ENST00000607187 KIAA0100Q14667 2235 aaKnown RBP11.97□□□□□ -0.49
CTSA-215ENST00000607187 CCDC85CA6NKD9 419 aa11.97□□□□□ -0.49
CTSA-215ENST00000607187 GSG1L2A8MUP6 293 aa11.97□□□□□ -0.49
CTSA-215ENST00000607187 C19orf81C9J6K1 198 aa11.97□□□□□ -0.49
CTSA-215ENST00000607187 USP17L12C9JPN9 530 aa11.97□□□□□ -0.49
CTSA-215ENST00000607187 USP17L21D6R901 530 aa11.97□□□□□ -0.49
CTSA-215ENST00000607187 M0R2C6 588 aa11.97□□□□□ -0.49
CTSA-215ENST00000607187 GPAA1O43292 621 aa11.97□□□□□ -0.49
CTSA-215ENST00000607187 BCRP11274 1271 aa11.97□□□□□ -0.49
CTSA-215ENST00000607187 CD44P16070 742 aaKnown RBP11.97□□□□□ -0.49
CTSA-215ENST00000607187 IRX6P78412 446 aaPredicted RBP11.97□□□□□ -0.49
CTSA-215ENST00000607187 LACTBP83111 547 aaPredicted RBP11.97□□□□□ -0.49
CTSA-215ENST00000607187 MTMR2Q13614 643 aa11.97□□□□□ -0.49
CTSA-215ENST00000607187 ABCB5Q2M3G0 1257 aa11.97□□□□□ -0.49
CTSA-215ENST00000607187 GIMAP6Q6P9H5 292 aa11.97□□□□□ -0.49
CTSA-215ENST00000607187 EVI5LQ96CN4 794 aa11.97□□□□□ -0.49
CTSA-215ENST00000607187 FSD1Q9BTV5 496 aa11.97□□□□□ -0.49
CTSA-215ENST00000607187 EFCC1Q9HA90 598 aa11.97□□□□□ -0.49
CTSA-215ENST00000607187 SWAP70Q9UH65 585 aa11.97□□□□□ -0.49
CTSA-215ENST00000607187 CPA4Q9UI42 421 aa11.97□□□□□ -0.49
CTSA-215ENST00000607187 HPS5Q9UPZ3 1129 aa11.97□□□□□ -0.49
CTSA-215ENST00000607187 MKI67P46013 3256 aaKnown RBP11.97□□□□□ -0.49
CTSA-215ENST00000607187 CYP2D7A0A087X1C5 515 aa11.96□□□□□ -0.49
CTSA-215ENST00000607187 GRXCR2A6NFK2 248 aa11.96□□□□□ -0.49
CTSA-215ENST00000607187 USP17L10C9JJH3 530 aa11.96□□□□□ -0.49
CTSA-215ENST00000607187 SMIM22K7EJ46 135 aa11.96□□□□□ -0.49
CTSA-215ENST00000607187 GUCY1A2P33402 732 aa11.96□□□□□ -0.49
CTSA-215ENST00000607187 RAB3GAP1Q15042 981 aa11.96□□□□□ -0.49
CTSA-215ENST00000607187 ARHGEF6Q15052 776 aa11.96□□□□□ -0.49
CTSA-215ENST00000607187 ZMYM1Q5SVZ6 1142 aa11.96□□□□□ -0.49
CTSA-215ENST00000607187 CTR9Q6PD62 1173 aa11.96□□□□□ -0.49
CTSA-215ENST00000607187 AMOTL1Q8IY63 956 aa11.96□□□□□ -0.49
CTSA-215ENST00000607187 SLC44A5Q8NCS7 719 aa11.96□□□□□ -0.49
CTSA-215ENST00000607187 DYNLL2Q96FJ2 89 aa11.96□□□□□ -0.49
CTSA-215ENST00000607187 CABP5Q9NP86 173 aa11.96□□□□□ -0.49
CTSA-215ENST00000607187 PTPN22Q9Y2R2 807 aa11.96□□□□□ -0.49
CTSA-215ENST00000607187 GNRH1P01148 92 aa11.95□□□□□ -0.5
CTSA-215ENST00000607187 GNAT2P19087 354 aa11.95□□□□□ -0.5
CTSA-215ENST00000607187 HOXA7P31268 230 aaPredicted RBP11.95□□□□□ -0.5
CTSA-215ENST00000607187 CDK8P49336 464 aa11.95□□□□□ -0.5
CTSA-215ENST00000607187 FOXK1P85037 733 aa11.95□□□□□ -0.5
CTSA-215ENST00000607187 PABPC4Q13310 644 aaKnown RBP eCLIP11.95□□□□□ -0.5
CTSA-215ENST00000607187 KIF22Q14807 665 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms