RNA–Protein interactions for RNA: ENST00000605895.5

RER1-209, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-209ENST00000605895 HDGFP51858 240 aaKnown RBP17.42■□□□□ 0.38
RER1-209ENST00000605895 ANKRD18AQ8IVF6 992 aa17.42■□□□□ 0.38
RER1-209ENST00000605895 ZBTB3Q9H5J0 574 aa17.42■□□□□ 0.38
RER1-209ENST00000605895 REXO2Q9Y3B8 237 aaKnown RBP17.42■□□□□ 0.38
RER1-209ENST00000605895 IDH1O75874 414 aaKnown RBP17.42■□□□□ 0.38
RER1-209ENST00000605895 AMPD2Q01433 879 aa17.42■□□□□ 0.38
RER1-209ENST00000605895 CTDSPL2Q05D32 466 aa17.42■□□□□ 0.38
RER1-209ENST00000605895 KRT31Q15323 416 aa17.42■□□□□ 0.38
RER1-209ENST00000605895 TMEM67Q5HYA8 995 aa17.42■□□□□ 0.38
RER1-209ENST00000605895 VPS54Q9P1Q0 977 aa17.42■□□□□ 0.38
RER1-209ENST00000605895 FBXO2Q9UK22 296 aaPredicted RBP17.42■□□□□ 0.38
RER1-209ENST00000605895 SAR1BQ9Y6B6 198 aa17.42■□□□□ 0.38
RER1-209ENST00000605895 SHTN1A0MZ66 631 aa17.41■□□□□ 0.38
RER1-209ENST00000605895 CCDC172P0C7W6 258 aa17.41■□□□□ 0.38
RER1-209ENST00000605895 UBXN1Q04323 297 aa17.41■□□□□ 0.38
RER1-209ENST00000605895 SPATA1Q5VX52 437 aa17.41■□□□□ 0.38
RER1-209ENST00000605895 RRAGBQ5VZM2 374 aa17.41■□□□□ 0.38
RER1-209ENST00000605895 ZNF790Q6PG37 636 aa17.41■□□□□ 0.38
RER1-209ENST00000605895 KIAA1328Q86T90 577 aa17.41■□□□□ 0.38
RER1-209ENST00000605895 JAKMIP2Q96AA8 810 aa17.41■□□□□ 0.38
RER1-209ENST00000605895 CHRM1P11229 460 aaPredicted RBP17.41■□□□□ 0.38
RER1-209ENST00000605895 CNGA4Q8IV77 575 aa17.41■□□□□ 0.38
RER1-209ENST00000605895 IP6K1Q92551 441 aa17.41■□□□□ 0.38
RER1-209ENST00000605895 EPN1Q9Y6I3 576 aaPredicted RBP17.41■□□□□ 0.38
RER1-209ENST00000605895 ERCC3P19447 782 aa17.4■□□□□ 0.38
RER1-209ENST00000605895 ATP6V1AP38606 617 aa17.4■□□□□ 0.38
RER1-209ENST00000605895 APBA1Q02410 837 aa17.4■□□□□ 0.38
RER1-209ENST00000605895 SUGP1Q8IWZ8 645 aaKnown RBP17.4■□□□□ 0.38
RER1-209ENST00000605895 DMGDHQ9UI17 866 aaKnown RBP17.4■□□□□ 0.38
RER1-209ENST00000605895 PXDNQ92626 1479 aa17.4■□□□□ 0.38
RER1-209ENST00000605895 ZC3H4Q9UPT8 1303 aaKnown RBP17.4■□□□□ 0.38
RER1-209ENST00000605895 BACH1O14867 736 aa17.4■□□□□ 0.38
RER1-209ENST00000605895 ACTN4O43707 911 aaKnown RBP17.4■□□□□ 0.38
RER1-209ENST00000605895 LACRTQ9GZZ8 138 aa17.4■□□□□ 0.38
RER1-209ENST00000605895 ZMYM6O95789 1325 aa17.4■□□□□ 0.38
RER1-209ENST00000605895 PRDM1O75626 825 aa17.39■□□□□ 0.38
RER1-209ENST00000605895 SSRP1Q08945 709 aaKnown RBP17.39■□□□□ 0.38
RER1-209ENST00000605895 CEP83Q9Y592 693 aa17.39■□□□□ 0.38
RER1-209ENST00000605895 MYH8P13535 1937 aa17.39■□□□□ 0.37
RER1-209ENST00000605895 RCCD1A6NED2 376 aa17.39■□□□□ 0.37
RER1-209ENST00000605895 IFIT3O14879 490 aaKnown RBP17.39■□□□□ 0.37
RER1-209ENST00000605895 KRT14P02533 472 aa17.39■□□□□ 0.37
RER1-209ENST00000605895 SARSP49591 514 aaKnown RBP17.39■□□□□ 0.37
RER1-209ENST00000605895 SAFBQ15424 915 aaKnown RBP eCLIP17.39■□□□□ 0.372e-6■■■■□ 19.6
RER1-209ENST00000605895 CYP26C1Q6V0L0 522 aa17.39■□□□□ 0.37
RER1-209ENST00000605895 OTUD6BQ8N6M0 293 aa17.39■□□□□ 0.37
RER1-209ENST00000605895 CTCFLQ8NI51 663 aaPredicted RBP17.39■□□□□ 0.37
RER1-209ENST00000605895 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.39■□□□□ 0.37
RER1-209ENST00000605895 TRIM49BA6NDI0 452 aa17.39■□□□□ 0.37
RER1-209ENST00000605895 WNT7AO00755 349 aa17.39■□□□□ 0.37
RER1-209ENST00000605895 NDUFA10O95299 355 aa17.39■□□□□ 0.37
RER1-209ENST00000605895 SEC24CP53992 1094 aa17.39■□□□□ 0.37
RER1-209ENST00000605895 GUCY1A3Q02108 690 aa17.39■□□□□ 0.37
RER1-209ENST00000605895 WDR93Q6P2C0 686 aa17.39■□□□□ 0.37
RER1-209ENST00000605895 CEP57Q86XR8 500 aa17.39■□□□□ 0.37
RER1-209ENST00000605895 TMTC1Q8IUR5 882 aa17.39■□□□□ 0.37
RER1-209ENST00000605895 NWD1Q149M9 1564 aa17.38■□□□□ 0.37
RER1-209ENST00000605895 ZNF174Q15697 407 aa17.38■□□□□ 0.37
RER1-209ENST00000605895 GBP6Q6ZN66 633 aa17.38■□□□□ 0.37
RER1-209ENST00000605895 PLIN2Q99541 437 aa17.38■□□□□ 0.37
RER1-209ENST00000605895 LRRC1Q9BTT6 524 aa17.38■□□□□ 0.37
RER1-209ENST00000605895 SLC12A7Q9Y666 1083 aa17.38■□□□□ 0.37
RER1-209ENST00000605895 TTC26A0AVF1 554 aa17.38■□□□□ 0.37
RER1-209ENST00000605895 IDEP14735 1019 aa17.38■□□□□ 0.37
RER1-209ENST00000605895 PTPREP23469 700 aa17.38■□□□□ 0.37
RER1-209ENST00000605895 RNASE9P60153 205 aaKnown RBP17.38■□□□□ 0.37
RER1-209ENST00000605895 XAGE2Q96GT9 111 aa17.38■□□□□ 0.37
RER1-209ENST00000605895 NAA15Q9BXJ9 866 aaKnown RBP17.38■□□□□ 0.37
RER1-209ENST00000605895 FAM217BQ9NTX9 383 aaPredicted RBP17.38■□□□□ 0.37
RER1-209ENST00000605895 ESYT3A0FGR9 886 aa17.37■□□□□ 0.37
RER1-209ENST00000605895 KLK7P49862 253 aa17.37■□□□□ 0.37
RER1-209ENST00000605895 EARS2Q5JPH6 523 aaKnown RBP17.37■□□□□ 0.37
RER1-209ENST00000605895 CCNI2Q6ZMN8 369 aaPredicted RBP17.37■□□□□ 0.37
RER1-209ENST00000605895 TRAPPC11Q7Z392 1133 aa17.37■□□□□ 0.37
RER1-209ENST00000605895 ANKRD13CQ8N6S4 541 aa17.37■□□□□ 0.37
RER1-209ENST00000605895 PAGE5Q96GU1 130 aa17.37■□□□□ 0.37
RER1-209ENST00000605895 PCMTD1Q96MG8 357 aaPredicted RBP17.37■□□□□ 0.37
RER1-209ENST00000605895 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.37■□□□□ 0.37
RER1-209ENST00000605895 CEP126Q9P2H0 1117 aa17.37■□□□□ 0.37
RER1-209ENST00000605895 KIAA0754O94854 1291 aa17.37■□□□□ 0.37
RER1-209ENST00000605895 CPP00450 1065 aa17.37■□□□□ 0.37
RER1-209ENST00000605895 AARSP49588 968 aaKnown RBP eCLIP17.37■□□□□ 0.37
RER1-209ENST00000605895 TTLL7Q6ZT98 887 aa17.37■□□□□ 0.37
RER1-209ENST00000605895 TSEN2Q8NCE0 465 aaKnown RBP17.37■□□□□ 0.37
RER1-209ENST00000605895 SYMPKQ92797 1274 aaKnown RBP17.37■□□□□ 0.37
RER1-209ENST00000605895 CDKL5O76039 1030 aa17.37■□□□□ 0.37
RER1-209ENST00000605895 KRT26Q7Z3Y9 468 aa17.37■□□□□ 0.37
RER1-209ENST00000605895 CEP89Q96ST8 783 aa17.37■□□□□ 0.37
RER1-209ENST00000605895 GDAQ9Y2T3 454 aa17.37■□□□□ 0.37
RER1-209ENST00000605895 NEO1Q92859 1461 aa17.36■□□□□ 0.37
RER1-209ENST00000605895 BAZ2BQ9UIF8 2168 aaKnown RBP17.36■□□□□ 0.37
RER1-209ENST00000605895 SH2B2O14492 632 aaPredicted RBP17.36■□□□□ 0.37
RER1-209ENST00000605895 PBX1P40424 430 aa17.36■□□□□ 0.37
RER1-209ENST00000605895 FOXO4P98177 505 aa17.36■□□□□ 0.37
RER1-209ENST00000605895 NTRK3Q16288 839 aa17.36■□□□□ 0.37
RER1-209ENST00000605895 GIMAP7Q8NHV1 300 aa17.36■□□□□ 0.37
RER1-209ENST00000605895 RUFY1Q96T51 708 aa17.36■□□□□ 0.37
RER1-209ENST00000605895 LRRC37A3O60309 1634 aa17.36■□□□□ 0.37
RER1-209ENST00000605895 NRXN3Q9Y4C0 1643 aa17.36■□□□□ 0.37
RER1-209ENST00000605895 PPP1R3GB7ZBB8 358 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms