RNA–Protein interactions for RNA: ENST00000605833.1

VIM-AS1-202, VIM antisense RNA 1, humanhuman

TSL 3 BASIC

Gene VIM-AS1, Length 918 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-AS1-202ENST00000605833 RAB3GAP1Q15042 981 aa25.43■■□□□ 1.66
VIM-AS1-202ENST00000605833 GTF3C2Q8WUA4 911 aaPredicted RBP25.43■■□□□ 1.66
VIM-AS1-202ENST00000605833 BMP8BP34820 402 aa25.42■■□□□ 1.66
VIM-AS1-202ENST00000605833 TATDN1Q6P1N9 297 aa25.42■■□□□ 1.66
VIM-AS1-202ENST00000605833 C12orf42Q96LP6 360 aa25.42■■□□□ 1.66
VIM-AS1-202ENST00000605833 SERPINB13Q9UIV8 391 aa25.42■■□□□ 1.66
VIM-AS1-202ENST00000605833 WDR78Q5VTH9 848 aa25.41■■□□□ 1.66
VIM-AS1-202ENST00000605833 TRMT44Q8IYL2 757 aaKnown RBP25.41■■□□□ 1.66
VIM-AS1-202ENST00000605833 ACER1Q8TDN7 264 aa25.41■■□□□ 1.66
VIM-AS1-202ENST00000605833 USP17L15C9J2P7 530 aa25.4■■□□□ 1.66
VIM-AS1-202ENST00000605833 USP17L13C9JLJ4 530 aa25.4■■□□□ 1.66
VIM-AS1-202ENST00000605833 USP17L11C9JVI0 530 aa25.4■■□□□ 1.66
VIM-AS1-202ENST00000605833 USP17L18D6R9N7 530 aa25.4■■□□□ 1.66
VIM-AS1-202ENST00000605833 USP17L22D6RA61 530 aa25.4■■□□□ 1.66
VIM-AS1-202ENST00000605833 USP17L17D6RBQ6 530 aa25.4■■□□□ 1.66
VIM-AS1-202ENST00000605833 USP17L19D6RCP7 530 aa25.4■■□□□ 1.66
VIM-AS1-202ENST00000605833 USP17L20D6RJB6 530 aa25.4■■□□□ 1.66
VIM-AS1-202ENST00000605833 IGSF3O75054 1194 aa25.4■■□□□ 1.66
VIM-AS1-202ENST00000605833 VCAM1P19320 739 aa25.4■■□□□ 1.66
VIM-AS1-202ENST00000605833 USP17L24Q0WX57 530 aa25.4■■□□□ 1.66
VIM-AS1-202ENST00000605833 LHX8Q68G74 356 aa25.4■■□□□ 1.66
VIM-AS1-202ENST00000605833 SLC17A8Q8NDX2 589 aa25.4■■□□□ 1.66
VIM-AS1-202ENST00000605833 EHD4Q9H223 541 aa25.4■■□□□ 1.66
VIM-AS1-202ENST00000605833 EXOC6BQ9Y2D4 811 aa25.4■■□□□ 1.66
VIM-AS1-202ENST00000605833 DNAH12Q6ZR08 3092 aa25.4■■□□□ 1.66
VIM-AS1-202ENST00000605833 COL6A1P12109 1028 aa25.39■■□□□ 1.66
VIM-AS1-202ENST00000605833 MAP2K5Q13163 448 aa25.39■■□□□ 1.66
VIM-AS1-202ENST00000605833 ABCB5Q2M3G0 1257 aa25.39■■□□□ 1.66
VIM-AS1-202ENST00000605833 CERKLQ49MI3 558 aaPredicted RBP25.39■■□□□ 1.66
VIM-AS1-202ENST00000605833 AACSQ86V21 672 aa25.39■■□□□ 1.66
VIM-AS1-202ENST00000605833 FLRT1Q9NZU1 646 aa25.39■■□□□ 1.66
VIM-AS1-202ENST00000605833 RABGAP1Q9Y3P9 1069 aa25.39■■□□□ 1.66
VIM-AS1-202ENST00000605833 ZBED9Q6R2W3 1325 aa25.38■■□□□ 1.65
VIM-AS1-202ENST00000605833 SHMT1P34896 483 aa25.38■■□□□ 1.65
VIM-AS1-202ENST00000605833 MAP3K12Q12852 859 aa25.38■■□□□ 1.65
VIM-AS1-202ENST00000605833 LRRC26Q2I0M4 334 aa25.38■■□□□ 1.65
VIM-AS1-202ENST00000605833 CEP85Q6P2H3 762 aa25.38■■□□□ 1.65
VIM-AS1-202ENST00000605833 PLCD1P51178 756 aa25.37■■□□□ 1.65
VIM-AS1-202ENST00000605833 EVX2Q03828 476 aa25.37■■□□□ 1.65
VIM-AS1-202ENST00000605833 CATSPERGQ6ZRH7 1159 aa25.37■■□□□ 1.65
VIM-AS1-202ENST00000605833 Q7L0L9 218 aa25.37■■□□□ 1.65
VIM-AS1-202ENST00000605833 CERS3Q8IU89 383 aa25.37■■□□□ 1.65
VIM-AS1-202ENST00000605833 UBE2OQ9C0C9 1292 aaKnown RBP25.37■■□□□ 1.65
VIM-AS1-202ENST00000605833 KIAA1683Q9H0B3 1180 aa25.37■■□□□ 1.65
VIM-AS1-202ENST00000605833 BTBD7Q9P203 1132 aa25.37■■□□□ 1.65
VIM-AS1-202ENST00000605833 USP14P54578 494 aa25.36■■□□□ 1.65
VIM-AS1-202ENST00000605833 CCNA1P78396 465 aa25.36■■□□□ 1.65
VIM-AS1-202ENST00000605833 TTC6Q86TZ1 520 aa25.36■■□□□ 1.65
VIM-AS1-202ENST00000605833 TDHQ8IZJ6 230 aa25.36■■□□□ 1.65
VIM-AS1-202ENST00000605833 RIOK1Q9BRS2 568 aaKnown RBP25.36■■□□□ 1.65
VIM-AS1-202ENST00000605833 RPAP3Q9H6T3 665 aaPredicted RBP25.36■■□□□ 1.65
VIM-AS1-202ENST00000605833 GUCY1A2P33402 732 aa25.35■■□□□ 1.65
VIM-AS1-202ENST00000605833 EDC3Q96F86 508 aaKnown RBP25.35■■□□□ 1.65
VIM-AS1-202ENST00000605833 IL1RAPL2Q9NP60 686 aa25.35■■□□□ 1.65
VIM-AS1-202ENST00000605833 MYH8P13535 1937 aa25.35■■□□□ 1.65
VIM-AS1-202ENST00000605833 SPDYE16A6NNV3 312 aaPredicted RBP25.34■■□□□ 1.65
VIM-AS1-202ENST00000605833 PTPREP23469 700 aa25.34■■□□□ 1.65
VIM-AS1-202ENST00000605833 SEPT2Q15019 361 aa25.34■■□□□ 1.65
VIM-AS1-202ENST00000605833 DEFB123Q8N688 67 aa25.34■■□□□ 1.65
VIM-AS1-202ENST00000605833 CABP5Q9NP86 173 aa25.34■■□□□ 1.65
VIM-AS1-202ENST00000605833 A0A0G2JMZ2 1700 aa25.34■■□□□ 1.65
VIM-AS1-202ENST00000605833 MAGEB6P1A0A0J9YX57 407 aa25.33■■□□□ 1.65
VIM-AS1-202ENST00000605833 SLC15A5A6NIM6 579 aa25.33■■□□□ 1.65
VIM-AS1-202ENST00000605833 GLRX3O76003 335 aaKnown RBP25.33■■□□□ 1.65
VIM-AS1-202ENST00000605833 POLR3DP05423 398 aaPredicted RBP25.33■■□□□ 1.65
VIM-AS1-202ENST00000605833 MDM2Q00987 491 aaPredicted RBP25.33■■□□□ 1.65
VIM-AS1-202ENST00000605833 LRIT3Q3SXY7 679 aa25.33■■□□□ 1.65
VIM-AS1-202ENST00000605833 MFSD14CQ5VZR4 134 aa25.33■■□□□ 1.65
VIM-AS1-202ENST00000605833 YTHDC1Q96MU7 727 aaKnown RBP25.33■■□□□ 1.65
VIM-AS1-202ENST00000605833 RLFQ13129 1914 aa25.32■■□□□ 1.64
VIM-AS1-202ENST00000605833 LBX2Q6XYB7 198 aa25.32■■□□□ 1.64
VIM-AS1-202ENST00000605833 NPLOC4Q8TAT6 608 aa25.32■■□□□ 1.64
VIM-AS1-202ENST00000605833 IVNS1ABPQ9Y6Y0 642 aa25.32■■□□□ 1.64
VIM-AS1-202ENST00000605833 ZNF236Q9UL36 1845 aa25.32■■□□□ 1.64
VIM-AS1-202ENST00000605833 DLL1O00548 723 aa25.31■■□□□ 1.64
VIM-AS1-202ENST00000605833 MPHOSPH10O00566 681 aaKnown RBP25.31■■□□□ 1.64
VIM-AS1-202ENST00000605833 PDE6AP16499 860 aa25.31■■□□□ 1.64
VIM-AS1-202ENST00000605833 CNGA1P29973 690 aa25.31■■□□□ 1.64
VIM-AS1-202ENST00000605833 CYP2C19P33261 490 aa25.31■■□□□ 1.64
VIM-AS1-202ENST00000605833 GRB14Q14449 540 aa25.31■■□□□ 1.64
VIM-AS1-202ENST00000605833 ERC1Q8IUD2 1116 aa25.31■■□□□ 1.64
VIM-AS1-202ENST00000605833 PANK1Q8TE04 598 aa25.31■■□□□ 1.64
VIM-AS1-202ENST00000605833 A0A0C4DFX4 3053 aa25.31■■□□□ 1.64
VIM-AS1-202ENST00000605833 A0A1W2PRG0 241 aa25.3■■□□□ 1.64
VIM-AS1-202ENST00000605833 ATP2B2Q01814 1243 aa25.3■■□□□ 1.64
VIM-AS1-202ENST00000605833 GABPAQ06546 454 aa25.3■■□□□ 1.64
VIM-AS1-202ENST00000605833 GPR153Q6NV75 609 aa25.3■■□□□ 1.64
VIM-AS1-202ENST00000605833 TRPV1Q8NER1 839 aa25.3■■□□□ 1.64
VIM-AS1-202ENST00000605833 SENP6Q9GZR1 1112 aaPredicted RBP25.3■■□□□ 1.64
VIM-AS1-202ENST00000605833 BCL11AQ9H165 835 aa25.3■■□□□ 1.64
VIM-AS1-202ENST00000605833 MCM9Q9NXL9 1143 aa25.3■■□□□ 1.64
VIM-AS1-202ENST00000605833 DDX20Q9UHI6 824 aaKnown RBP25.3■■□□□ 1.64
VIM-AS1-202ENST00000605833 LAMA2P24043 3122 aaKnown RBP25.29■■□□□ 1.64
VIM-AS1-202ENST00000605833 APBB1O00213 710 aa25.29■■□□□ 1.64
VIM-AS1-202ENST00000605833 CYP2D6P10635 497 aa25.29■■□□□ 1.64
VIM-AS1-202ENST00000605833 SLC9C2Q5TAH2 1124 aa25.29■■□□□ 1.64
VIM-AS1-202ENST00000605833 SLC44A5Q8NCS7 719 aa25.29■■□□□ 1.64
VIM-AS1-202ENST00000605833 SDR42E1Q8WUS8 393 aa25.29■■□□□ 1.64
VIM-AS1-202ENST00000605833 CRNKL1Q9BZJ0 848 aaKnown RBP25.29■■□□□ 1.64
VIM-AS1-202ENST00000605833 BAZ2AQ9UIF9 1905 aaKnown RBP25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms