RNA–Protein interactions for RNA: ENST00000605457.5

TUBE1-211, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,645 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-211ENST00000605457 NOM1Q5C9Z4 860 aaKnown RBP16.93■□□□□ 0.3
TUBE1-211ENST00000605457 PROCA1Q8NCQ7 364 aaPredicted RBP16.93■□□□□ 0.3
TUBE1-211ENST00000605457 PARP14Q460N5 1801 aa16.93■□□□□ 0.3
TUBE1-211ENST00000605457 DGKZQ13574 1117 aa16.92■□□□□ 0.3
TUBE1-211ENST00000605457 MKNK2Q9HBH9 465 aa16.92■□□□□ 0.3
TUBE1-211ENST00000605457 ZNF287Q9HBT7 754 aa16.92■□□□□ 0.3
TUBE1-211ENST00000605457 ANAPC4Q9UJX5 808 aa16.92■□□□□ 0.3
TUBE1-211ENST00000605457 AGTPBP1Q9UPW5 1226 aa16.92■□□□□ 0.3
TUBE1-211ENST00000605457 C19orf81C9J6K1 198 aa16.92■□□□□ 0.3
TUBE1-211ENST00000605457 GPR25O00155 361 aa16.92■□□□□ 0.3
TUBE1-211ENST00000605457 SLC3A2P08195 630 aaKnown RBP16.92■□□□□ 0.3
TUBE1-211ENST00000605457 TREML2Q5T2D2 321 aa16.92■□□□□ 0.3
TUBE1-211ENST00000605457 CLEC10AQ8IUN9 316 aa16.92■□□□□ 0.3
TUBE1-211ENST00000605457 RUFY2Q8WXA3 655 aa16.92■□□□□ 0.3
TUBE1-211ENST00000605457 SLC45A1Q9Y2W3 748 aa16.92■□□□□ 0.3
TUBE1-211ENST00000605457 CENPFP49454 3210 aa16.92■□□□□ 0.3
TUBE1-211ENST00000605457 MGAMO43451 1857 aa16.91■□□□□ 0.3
TUBE1-211ENST00000605457 ZSWIM8A7E2V4 1837 aa16.91■□□□□ 0.3
TUBE1-211ENST00000605457 PRDM1O75626 825 aa16.91■□□□□ 0.3
TUBE1-211ENST00000605457 CTDSPL2Q05D32 466 aa16.91■□□□□ 0.3
TUBE1-211ENST00000605457 PDE4BQ07343 736 aa16.91■□□□□ 0.3
TUBE1-211ENST00000605457 ACER1Q8TDN7 264 aa16.91■□□□□ 0.3
TUBE1-211ENST00000605457 DSCC1Q9BVC3 393 aa16.91■□□□□ 0.3
TUBE1-211ENST00000605457 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.91■□□□□ 0.3
TUBE1-211ENST00000605457 ZFYVE28Q9HCC9 887 aa16.91■□□□□ 0.3
TUBE1-211ENST00000605457 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.91■□□□□ 0.3
TUBE1-211ENST00000605457 ADGRA2Q96PE1 1338 aa16.9■□□□□ 0.3
TUBE1-211ENST00000605457 PLIN4Q96Q06 1357 aa16.9■□□□□ 0.3
TUBE1-211ENST00000605457 SGSM2O43147 1006 aa16.9■□□□□ 0.3
TUBE1-211ENST00000605457 ICA1Q05084 483 aa16.9■□□□□ 0.3
TUBE1-211ENST00000605457 ZNF296Q8WUU4 475 aaPredicted RBP16.9■□□□□ 0.3
TUBE1-211ENST00000605457 FEZ1Q99689 392 aa16.9■□□□□ 0.3
TUBE1-211ENST00000605457 KIAA1683Q9H0B3 1180 aa16.9■□□□□ 0.3
TUBE1-211ENST00000605457 TACC3Q9Y6A5 838 aa16.9■□□□□ 0.3
TUBE1-211ENST00000605457 RLFQ13129 1914 aa16.9■□□□□ 0.3
TUBE1-211ENST00000605457 A0A1W2PRG0 241 aa16.89■□□□□ 0.29
TUBE1-211ENST00000605457 TLR2O60603 784 aa16.89■□□□□ 0.29
TUBE1-211ENST00000605457 COL13A1Q5TAT6 717 aaPredicted RBP16.89■□□□□ 0.29
TUBE1-211ENST00000605457 SIAH1Q8IUQ4 282 aa16.89■□□□□ 0.29
TUBE1-211ENST00000605457 C12orf42Q96LP6 360 aa16.89■□□□□ 0.29
TUBE1-211ENST00000605457 PARK7Q99497 189 aaKnown RBP16.89■□□□□ 0.29
TUBE1-211ENST00000605457 NBPF3Q9H094 633 aa16.89■□□□□ 0.29
TUBE1-211ENST00000605457 EMILIN3Q9NT22 766 aa16.89■□□□□ 0.29
TUBE1-211ENST00000605457 TMOD4Q9NZQ9 345 aa16.89■□□□□ 0.29
TUBE1-211ENST00000605457 FGRP09769 529 aa16.88■□□□□ 0.29
TUBE1-211ENST00000605457 CYP2C8P10632 490 aa16.88■□□□□ 0.29
TUBE1-211ENST00000605457 USP14P54578 494 aa16.88■□□□□ 0.29
TUBE1-211ENST00000605457 ZYXQ15942 572 aaKnown RBP16.88■□□□□ 0.29
TUBE1-211ENST00000605457 USP17L2Q6R6M4 530 aa16.88■□□□□ 0.29
TUBE1-211ENST00000605457 ZNF444Q8N0Y2 327 aaPredicted RBP16.88■□□□□ 0.29
TUBE1-211ENST00000605457 KANSL2Q9H9L4 492 aa16.88■□□□□ 0.29
TUBE1-211ENST00000605457 HAND2P61296 217 aa16.88■□□□□ 0.29
TUBE1-211ENST00000605457 ARHGEF10LQ9HCE6 1279 aa16.88■□□□□ 0.29
TUBE1-211ENST00000605457 INCENPQ9NQS7 918 aa16.88■□□□□ 0.29
TUBE1-211ENST00000605457 DOCK3Q8IZD9 2030 aa16.88■□□□□ 0.29
TUBE1-211ENST00000605457 IGKV6D-41A0A0C4DH26 115 aa16.87■□□□□ 0.29
TUBE1-211ENST00000605457 ORC4O43929 436 aa16.87■□□□□ 0.29
TUBE1-211ENST00000605457 FKTNO75072 461 aa16.87■□□□□ 0.29
TUBE1-211ENST00000605457 HOXA7P31268 230 aaPredicted RBP16.87■□□□□ 0.29
TUBE1-211ENST00000605457 PABPC4Q13310 644 aaKnown RBP eCLIP16.87■□□□□ 0.29
TUBE1-211ENST00000605457 TBC1D10CQ8IV04 446 aa16.87■□□□□ 0.29
TUBE1-211ENST00000605457 PNMA3Q9UL41 463 aa16.87■□□□□ 0.29
TUBE1-211ENST00000605457 TMX2Q9Y320 296 aa16.87■□□□□ 0.29
TUBE1-211ENST00000605457 TSPY3P0CV98 308 aa16.86■□□□□ 0.29
TUBE1-211ENST00000605457 TSPY8P0CW00 308 aa16.86■□□□□ 0.29
TUBE1-211ENST00000605457 EEF2P13639 858 aaKnown RBP16.86■□□□□ 0.29
TUBE1-211ENST00000605457 VCAM1P19320 739 aa16.86■□□□□ 0.29
TUBE1-211ENST00000605457 FAM47AQ5JRC9 791 aa16.86■□□□□ 0.29
TUBE1-211ENST00000605457 NEDD1Q8NHV4 660 aa16.86■□□□□ 0.29
TUBE1-211ENST00000605457 STAG1Q8WVM7 1258 aa16.86■□□□□ 0.29
TUBE1-211ENST00000605457 SH2D4AQ9H788 454 aa16.86■□□□□ 0.29
TUBE1-211ENST00000605457 A0A0G2JMZ2 1700 aa16.86■□□□□ 0.29
TUBE1-211ENST00000605457 ZNF213O14771 459 aa16.85■□□□□ 0.29
TUBE1-211ENST00000605457 PCP11498 1178 aaKnown RBP16.85■□□□□ 0.29
TUBE1-211ENST00000605457 TFAP4Q01664 338 aa16.85■□□□□ 0.29
TUBE1-211ENST00000605457 SP3Q02447 781 aa16.85■□□□□ 0.29
TUBE1-211ENST00000605457 PTH1RQ03431 593 aa16.85■□□□□ 0.29
TUBE1-211ENST00000605457 AKNAD1Q5T1N1 836 aa16.85■□□□□ 0.29
TUBE1-211ENST00000605457 C17orf99Q6UX52 265 aa16.85■□□□□ 0.29
TUBE1-211ENST00000605457 CEP95Q96GE4 821 aa16.85■□□□□ 0.29
TUBE1-211ENST00000605457 ESYT1Q9BSJ8 1104 aa16.85■□□□□ 0.29
TUBE1-211ENST00000605457 ASCC2Q9H1I8 757 aaPredicted RBP16.85■□□□□ 0.29
TUBE1-211ENST00000605457 CTNNA3Q9UI47 895 aa16.85■□□□□ 0.29
TUBE1-211ENST00000605457 COL11A1P12107 1806 aaPredicted RBP16.85■□□□□ 0.29
TUBE1-211ENST00000605457 ATP2B2Q01814 1243 aa16.85■□□□□ 0.29
TUBE1-211ENST00000605457 KIAA1755Q5JYT7 1200 aa16.85■□□□□ 0.29
TUBE1-211ENST00000605457 SMCR8Q8TEV9 937 aaPredicted RBP16.85■□□□□ 0.29
TUBE1-211ENST00000605457 MTMR4Q9NYA4 1195 aa16.85■□□□□ 0.29
TUBE1-211ENST00000605457 NYAP2Q9P242 653 aa16.85■□□□□ 0.29
TUBE1-211ENST00000605457 CPA4Q9UI42 421 aa16.85■□□□□ 0.29
TUBE1-211ENST00000605457 TSPY2A6NKD2 308 aa16.84■□□□□ 0.29
TUBE1-211ENST00000605457 RANBP6O60518 1105 aaKnown RBP16.84■□□□□ 0.29
TUBE1-211ENST00000605457 CDC45O75419 566 aa16.84■□□□□ 0.29
TUBE1-211ENST00000605457 BCRP11274 1271 aa16.84■□□□□ 0.29
TUBE1-211ENST00000605457 OSBPP22059 807 aa16.84■□□□□ 0.29
TUBE1-211ENST00000605457 IRX3P78415 501 aaPredicted RBP16.84■□□□□ 0.29
TUBE1-211ENST00000605457 IMMTQ16891 758 aaKnown RBP16.84■□□□□ 0.29
TUBE1-211ENST00000605457 MFSD6Q6ZSS7 791 aa16.84■□□□□ 0.29
TUBE1-211ENST00000605457 LPAR1Q92633 364 aa16.84■□□□□ 0.29
TUBE1-211ENST00000605457 VCPKMTQ9H867 229 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms