RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 KLHL40Q2TBA0 621 aa14.28□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 MCTP1Q6DN14 999 aa14.28□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 TATDN1Q6P1N9 297 aa14.28□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 TMTC3Q6ZXV5 915 aa14.28□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 NBPF11Q86T75 865 aa14.28□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 CRACR2BQ8N4Y2 399 aaPredicted RBP14.28□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 PNMA1Q8ND90 353 aa14.28□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 NLGN2Q8NFZ4 835 aa14.28□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 FAM151AQ8WW52 585 aa14.28□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 PRMT6Q96LA8 375 aaPredicted RBP14.28□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 SCAND2PQ9GZW5 306 aaPredicted RBP14.28□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 LMBRD1Q9NUN5 540 aa14.28□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 TBC1D12O60347 775 aa14.27□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 XBP1P17861 261 aa14.27□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 SHMT1P34896 483 aa14.27□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 FUT2Q10981 343 aa14.27□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 TRIM29Q14134 588 aa14.27□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 STK11IPQ8N1F8 1099 aa14.27□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 SLC44A5Q8NCS7 719 aa14.27□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 TDRD3Q9H7E2 651 aaKnown RBP14.27□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 ZNF70Q9UC06 446 aaPredicted RBP14.27□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 CFAP45Q9UL16 551 aa14.27□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 TRAK2O60296 914 aa14.26□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 LMNB1P20700 586 aa14.26□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 TNFAIP1Q13829 316 aa14.26□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 NUP133Q8WUM0 1156 aa14.26□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 ALG1Q9BT22 464 aa14.26□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 MYL10Q9BUA6 226 aa14.26□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 MTMR4Q9NYA4 1195 aa14.26□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 CNTNAP5Q8WYK1 1306 aa14.25□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 NMT2O60551 498 aa14.25□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 TTLL1O95922 423 aa14.25□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 TNNI2P48788 182 aa14.25□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 AKAP17AQ02040 695 aaKnown RBP14.25□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 ZNF396Q96N95 335 aaPredicted RBP14.25□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 TMEM47Q9BQJ4 181 aa14.25□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 SLC26A6Q9BXS9 759 aa14.25□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 TRIM34Q9BYJ4 488 aa14.25□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 FHDC1Q9C0D6 1143 aaPredicted RBP14.25□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 MYOZ2Q9NPC6 264 aa14.25□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 DOCK1Q14185 1865 aa14.25□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 CNTNAP1P78357 1384 aa14.24□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 PALM3A6NDB9 673 aaPredicted RBP14.24□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 DDTLA6NHG4 134 aaPredicted RBP14.24□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 NCLP19338 710 aaKnown RBP14.24□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 RXRAP19793 462 aa14.24□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 MAP3K10Q02779 954 aa14.24□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 TMEM179Q6ZVK1 233 aa14.24□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 SH3BP5LQ7L8J4 393 aa14.24□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 MKL1Q969V6 931 aa14.24□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 CEP95Q96GE4 821 aa14.24□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.24□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 SPZ1Q9BXG8 430 aa14.24□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 DNAJC18Q9H819 358 aa14.24□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 KANSL2Q9H9L4 492 aa14.24□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 SH3GLB2Q9NR46 395 aa14.24□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 GINM1Q9NU53 330 aa14.24□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 NYAP2Q9P242 653 aa14.24□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 STX8Q9UNK0 236 aa14.24□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 ZC3H4Q9UPT8 1303 aaKnown RBP14.23□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 hCG_1984214I3L0E3 225 aa14.23□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 WNT10BO00744 389 aa14.23□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 SNHG28P0DPA3 235 aa14.23□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 U2AF2P26368 475 aaKnown RBP eCLIP14.23□□□□□ -0.131e-6■□□□□ 10.9
NEDD8-MDP1-203ENST00000604306 UBE2HP62256 183 aa14.23□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 KIF23Q02241 960 aaPredicted RBP14.23□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 RASSF7Q02833 373 aa14.23□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 SLC4A8Q2Y0W8 1093 aa14.23□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 ASPRV1Q53RT3 343 aa14.23□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 KRT40Q6A162 431 aa14.23□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 RAB11FIP4Q86YS3 637 aa14.23□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 ZSCAN29Q8IWY8 852 aaPredicted RBP14.23□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 CCDC144CPQ8IYA2 1237 aa14.23□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 GPC2Q8N158 579 aa14.23□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 ZNF713Q8N859 430 aaPredicted RBP14.23□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 PHKBQ93100 1093 aa14.23□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 FOXP1Q9H334 677 aaPredicted RBP14.23□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 ZBTB12Q9Y330 459 aaPredicted RBP14.23□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 PCDHAC2Q9Y5I4 1007 aa14.23□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 BAZ2BQ9UIF8 2168 aaKnown RBP14.23□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 SCN4AP35499 1836 aa14.22□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 MMP1P03956 469 aa14.22□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 AKR1B1P15121 316 aa14.22□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 DNM1Q05193 864 aaKnown RBP14.22□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 TCP10Q12799 353 aa14.22□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 SAFBQ15424 915 aaKnown RBP eCLIP14.22□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 CERKLQ49MI3 558 aaPredicted RBP14.22□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 FOXD4L5Q5VV16 416 aaPredicted RBP14.22□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 ZFPM1Q8IX07 1006 aa14.22□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 FOXD4L4Q8WXT5 416 aaPredicted RBP14.22□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 CSRNP1Q96S65 589 aa14.22□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 SYT17Q9BSW7 474 aa14.22□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 MAD2L2Q9UI95 211 aa14.22□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 ISY1Q9ULR0 285 aaKnown RBP14.22□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 DDX49Q9Y6V7 483 aaKnown RBP14.22□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 MORC2Q9Y6X9 1032 aaPredicted RBP14.22□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 PRPF40AO75400 957 aaKnown RBP14.21□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 YEATS4O95619 227 aa14.21□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 PARP1P09874 1014 aaKnown RBP14.21□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 GMPSP49915 693 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms