RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 SMC4Q9NTJ3 1288 aa14.5□□□□□ -0.09
PDLIM1P1-201ENST00000604187 GINM1Q9NU53 330 aa14.5□□□□□ -0.09
PDLIM1P1-201ENST00000604187 AATFQ9NY61 560 aaKnown RBP eCLIP14.5□□□□□ -0.09
PDLIM1P1-201ENST00000604187 PALD1Q9ULE6 856 aa14.5□□□□□ -0.09
PDLIM1P1-201ENST00000604187 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.5□□□□□ -0.09
PDLIM1P1-201ENST00000604187 IVNS1ABPQ9Y6Y0 642 aa14.5□□□□□ -0.09
PDLIM1P1-201ENST00000604187 BDP1A6H8Y1 2624 aa14.49□□□□□ -0.09
PDLIM1P1-201ENST00000604187 USP17L15C9J2P7 530 aa14.49□□□□□ -0.09
PDLIM1P1-201ENST00000604187 USP17L13C9JLJ4 530 aa14.49□□□□□ -0.09
PDLIM1P1-201ENST00000604187 KBTBD13C9JR72 458 aa14.49□□□□□ -0.09
PDLIM1P1-201ENST00000604187 USP17L11C9JVI0 530 aa14.49□□□□□ -0.09
PDLIM1P1-201ENST00000604187 USP17L18D6R9N7 530 aa14.49□□□□□ -0.09
PDLIM1P1-201ENST00000604187 USP17L22D6RA61 530 aa14.49□□□□□ -0.09
PDLIM1P1-201ENST00000604187 USP17L17D6RBQ6 530 aa14.49□□□□□ -0.09
PDLIM1P1-201ENST00000604187 USP17L19D6RCP7 530 aa14.49□□□□□ -0.09
PDLIM1P1-201ENST00000604187 USP17L20D6RJB6 530 aa14.49□□□□□ -0.09
PDLIM1P1-201ENST00000604187 BAG3O95817 575 aa14.49□□□□□ -0.09
PDLIM1P1-201ENST00000604187 GH2P01242 217 aa14.49□□□□□ -0.09
PDLIM1P1-201ENST00000604187 CYBAP13498 195 aa14.49□□□□□ -0.09
PDLIM1P1-201ENST00000604187 ARID4AP29374 1257 aaPredicted RBP14.49□□□□□ -0.09
PDLIM1P1-201ENST00000604187 USP17L24Q0WX57 530 aa14.49□□□□□ -0.09
PDLIM1P1-201ENST00000604187 GRB14Q14449 540 aa14.49□□□□□ -0.09
PDLIM1P1-201ENST00000604187 SLC39A5Q6ZMH5 540 aa14.49□□□□□ -0.09
PDLIM1P1-201ENST00000604187 FOXP4Q8IVH2 680 aaPredicted RBP14.49□□□□□ -0.09
PDLIM1P1-201ENST00000604187 FAM9BQ8IZU0 186 aa14.49□□□□□ -0.09
PDLIM1P1-201ENST00000604187 ARRDC4Q8NCT1 418 aa14.49□□□□□ -0.09
PDLIM1P1-201ENST00000604187 SAP30BPQ9UHR5 308 aaKnown RBP14.49□□□□□ -0.09
PDLIM1P1-201ENST00000604187 HDAC5Q9UQL6 1122 aa14.49□□□□□ -0.09
PDLIM1P1-201ENST00000604187 SRGAP3O43295 1099 aa14.48□□□□□ -0.09
PDLIM1P1-201ENST00000604187 PLCG2P16885 1265 aa14.48□□□□□ -0.09
PDLIM1P1-201ENST00000604187 MCAMP43121 646 aa14.48□□□□□ -0.09
PDLIM1P1-201ENST00000604187 TJAP1Q5JTD0 557 aa14.48□□□□□ -0.09
PDLIM1P1-201ENST00000604187 ANO1Q5XXA6 986 aa14.48□□□□□ -0.09
PDLIM1P1-201ENST00000604187 NAA16Q6N069 864 aaPredicted RBP14.48□□□□□ -0.09
PDLIM1P1-201ENST00000604187 SH3RF1Q7Z6J0 888 aa14.48□□□□□ -0.09
PDLIM1P1-201ENST00000604187 USP38Q8NB14 1042 aa14.48□□□□□ -0.09
PDLIM1P1-201ENST00000604187 NPLOC4Q8TAT6 608 aa14.48□□□□□ -0.09
PDLIM1P1-201ENST00000604187 C12orf42Q96LP6 360 aa14.48□□□□□ -0.09
PDLIM1P1-201ENST00000604187 MEIS3Q99687 375 aa14.48□□□□□ -0.09
PDLIM1P1-201ENST00000604187 BTBD7Q9P203 1132 aa14.48□□□□□ -0.09
PDLIM1P1-201ENST00000604187 MYH2Q9UKX2 1941 aa14.48□□□□□ -0.09
PDLIM1P1-201ENST00000604187 TRIM43BA6NCK2 446 aa14.47□□□□□ -0.09
PDLIM1P1-201ENST00000604187 TNFRSF10AO00220 468 aa14.47□□□□□ -0.09
PDLIM1P1-201ENST00000604187 HLA-DOAP06340 250 aa14.47□□□□□ -0.09
PDLIM1P1-201ENST00000604187 VCAM1P19320 739 aa14.47□□□□□ -0.09
PDLIM1P1-201ENST00000604187 SNX17Q15036 470 aa14.47□□□□□ -0.09
PDLIM1P1-201ENST00000604187 ALDH1L2Q3SY69 923 aa14.47□□□□□ -0.09
PDLIM1P1-201ENST00000604187 ADGRA1Q86SQ6 560 aa14.47□□□□□ -0.09
PDLIM1P1-201ENST00000604187 TRIM43Q96BQ3 446 aaPredicted RBP14.47□□□□□ -0.09
PDLIM1P1-201ENST00000604187 RNPC3Q96LT9 517 aaKnown RBP14.47□□□□□ -0.09
PDLIM1P1-201ENST00000604187 MAST2Q6P0Q8 1798 aa14.47□□□□□ -0.09
PDLIM1P1-201ENST00000604187 TMEM265A0A087WTH1 108 aa14.46□□□□□ -0.09
PDLIM1P1-201ENST00000604187 E9PSI1 815 aa14.46□□□□□ -0.09
PDLIM1P1-201ENST00000604187 IGHA2P01877 340 aa14.46□□□□□ -0.09
PDLIM1P1-201ENST00000604187 ADCYAP1R1P41586 468 aa14.46□□□□□ -0.09
PDLIM1P1-201ENST00000604187 ATF7IPQ6VMQ6 1270 aa14.46□□□□□ -0.09
PDLIM1P1-201ENST00000604187 CATSPERGQ6ZRH7 1159 aa14.46□□□□□ -0.09
PDLIM1P1-201ENST00000604187 FERMT2Q96AC1 680 aa14.46□□□□□ -0.09
PDLIM1P1-201ENST00000604187 SNRKQ9NRH2 765 aa14.46□□□□□ -0.09
PDLIM1P1-201ENST00000604187 RAPGEFL1Q9UHV5 662 aa14.46□□□□□ -0.09
PDLIM1P1-201ENST00000604187 SPDYE16A6NNV3 312 aaPredicted RBP14.45□□□□□ -0.1
PDLIM1P1-201ENST00000604187 UQCRFS1P1P0C7P4 283 aa14.45□□□□□ -0.1
PDLIM1P1-201ENST00000604187 ADORA2AP29274 412 aa14.45□□□□□ -0.1
PDLIM1P1-201ENST00000604187 DSG3P32926 999 aa14.45□□□□□ -0.1
PDLIM1P1-201ENST00000604187 EPHB4P54760 987 aa14.45□□□□□ -0.1
PDLIM1P1-201ENST00000604187 PPP4CP60510 307 aa14.45□□□□□ -0.1
PDLIM1P1-201ENST00000604187 TLE2Q04725 743 aa14.45□□□□□ -0.1
PDLIM1P1-201ENST00000604187 GRIN2CQ14957 1233 aa14.45□□□□□ -0.1
PDLIM1P1-201ENST00000604187 RAB3GAP1Q15042 981 aa14.45□□□□□ -0.1
PDLIM1P1-201ENST00000604187 DPP9Q86TI2 863 aa14.45□□□□□ -0.1
PDLIM1P1-201ENST00000604187 ACER1Q8TDN7 264 aa14.45□□□□□ -0.1
PDLIM1P1-201ENST00000604187 SEPT4O43236 478 aa14.44□□□□□ -0.1
PDLIM1P1-201ENST00000604187 ANP32CO43423 234 aa14.44□□□□□ -0.1
PDLIM1P1-201ENST00000604187 ITGB8P26012 769 aa14.44□□□□□ -0.1
PDLIM1P1-201ENST00000604187 USP14P54578 494 aa14.44□□□□□ -0.1
PDLIM1P1-201ENST00000604187 OLFML2BQ68BL8 750 aa14.44□□□□□ -0.1
PDLIM1P1-201ENST00000604187 LBX2Q6XYB7 198 aa14.44□□□□□ -0.1
PDLIM1P1-201ENST00000604187 KIAA1683Q9H0B3 1180 aa14.44□□□□□ -0.1
PDLIM1P1-201ENST00000604187 RPAP3Q9H6T3 665 aaPredicted RBP14.44□□□□□ -0.1
PDLIM1P1-201ENST00000604187 NOB1Q9ULX3 412 aaKnown RBP14.44□□□□□ -0.1
PDLIM1P1-201ENST00000604187 ABCB7O75027 752 aa14.43□□□□□ -0.1
PDLIM1P1-201ENST00000604187 MTX1Q13505 466 aa14.43□□□□□ -0.1
PDLIM1P1-201ENST00000604187 LRRC41Q15345 812 aa14.43□□□□□ -0.1
PDLIM1P1-201ENST00000604187 FAM47AQ5JRC9 791 aa14.43□□□□□ -0.1
PDLIM1P1-201ENST00000604187 C1orf53Q5VUE5 145 aa14.43□□□□□ -0.1
PDLIM1P1-201ENST00000604187 TATDN1Q6P1N9 297 aa14.43□□□□□ -0.1
PDLIM1P1-201ENST00000604187 MOV10L1Q9BXT6 1211 aaKnown RBP14.43□□□□□ -0.1
PDLIM1P1-201ENST00000604187 API5Q9BZZ5 524 aaKnown RBP14.43□□□□□ -0.1
PDLIM1P1-201ENST00000604187 CLTBP09497 229 aa14.42□□□□□ -0.1
PDLIM1P1-201ENST00000604187 DNAJB2P25686 324 aa14.42□□□□□ -0.1
PDLIM1P1-201ENST00000604187 DYNLL1P63167 89 aaKnown RBP14.42□□□□□ -0.1
PDLIM1P1-201ENST00000604187 PRAMEF19Q5SWL8 479 aa14.42□□□□□ -0.1
PDLIM1P1-201ENST00000604187 LTBP2Q14767 1821 aa14.42□□□□□ -0.1
PDLIM1P1-201ENST00000604187 SIPA1L1O43166 1804 aa14.41□□□□□ -0.1
PDLIM1P1-201ENST00000604187 COBLO75128 1261 aa14.41□□□□□ -0.1
PDLIM1P1-201ENST00000604187 FPGSQ05932 587 aa14.41□□□□□ -0.1
PDLIM1P1-201ENST00000604187 ABCB5Q2M3G0 1257 aa14.41□□□□□ -0.1
PDLIM1P1-201ENST00000604187 TTC39AQ5SRH9 613 aa14.41□□□□□ -0.1
PDLIM1P1-201ENST00000604187 SERPINB13Q9UIV8 391 aa14.41□□□□□ -0.1
PDLIM1P1-201ENST00000604187 PHF24Q9UPV7 400 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms