RNA–Protein interactions for RNA: ENST00000603679.1

VCAM1-205, Transcript of vascular cell adhesion molecule 1, humanhuman

Gene VCAM1, Length 3,865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-205ENST00000603679 USP2O75604 605 aaPredicted RBP3.6□□□□□ -1.83
VCAM1-205ENST00000603679 WEE1P30291 646 aa3.6□□□□□ -1.83
VCAM1-205ENST00000603679 RABL6Q3YEC7 729 aaPredicted RBP3.6□□□□□ -1.83
VCAM1-205ENST00000603679 GPAT2Q6NUI2 795 aa3.6□□□□□ -1.83
VCAM1-205ENST00000603679 ZNF454Q8N9F8 522 aa3.6□□□□□ -1.83
VCAM1-205ENST00000603679 ATXN2LQ8WWM7 1075 aaKnown RBP3.6□□□□□ -1.83
VCAM1-205ENST00000603679 HTATIP2Q9BUP3 242 aa3.6□□□□□ -1.83
VCAM1-205ENST00000603679 ADAM33Q9BZ11 813 aa3.6□□□□□ -1.83
VCAM1-205ENST00000603679 DDX41Q9UJV9 622 aaKnown RBP3.6□□□□□ -1.83
VCAM1-205ENST00000603679 IQSEC3Q9UPP2 1182 aaPredicted RBP3.6□□□□□ -1.83
VCAM1-205ENST00000603679 COLQQ9Y215 455 aaPredicted RBP3.6□□□□□ -1.83
VCAM1-205ENST00000603679 COL4A3BPQ9Y5P4 624 aa3.6□□□□□ -1.83
VCAM1-205ENST00000603679 UTRNP46939 3433 aa3.6□□□□□ -1.83
VCAM1-205ENST00000603679 MICAL3Q7RTP6 2002 aa3.6□□□□□ -1.83
VCAM1-205ENST00000603679 A0A0G2JLL6 359 aaPredicted RBP3.6□□□□□ -1.83
VCAM1-205ENST00000603679 TRIM6-TRIM34B2RNG4 842 aa3.6□□□□□ -1.83
VCAM1-205ENST00000603679 PROB1E7EW31 1015 aa3.6□□□□□ -1.83
VCAM1-205ENST00000603679 H7C1D1 291 aa3.6□□□□□ -1.83
VCAM1-205ENST00000603679 H7C1W4 665 aa3.6□□□□□ -1.83
VCAM1-205ENST00000603679 TRAF5O00463 557 aa3.6□□□□□ -1.83
VCAM1-205ENST00000603679 ECE2O60344 883 aa3.6□□□□□ -1.83
VCAM1-205ENST00000603679 NEFMP07197 916 aa3.6□□□□□ -1.83
VCAM1-205ENST00000603679 GTF2A2P52657 109 aa3.6□□□□□ -1.83
VCAM1-205ENST00000603679 MTX1Q13505 466 aa3.6□□□□□ -1.83
VCAM1-205ENST00000603679 SULT6B1Q6IMI4 303 aa3.6□□□□□ -1.83
VCAM1-205ENST00000603679 PPP1R18Q6NYC8 613 aa3.6□□□□□ -1.83
VCAM1-205ENST00000603679 PDXDC2PQ6P474 469 aa3.6□□□□□ -1.83
VCAM1-205ENST00000603679 PRRT2Q7Z6L0 340 aaPredicted RBP3.6□□□□□ -1.83
VCAM1-205ENST00000603679 NBPF5PQ86XG9 351 aaPredicted RBP3.6□□□□□ -1.83
VCAM1-205ENST00000603679 MPNDQ8N594 471 aa3.6□□□□□ -1.83
VCAM1-205ENST00000603679 GUCD1Q96NT3 240 aa3.6□□□□□ -1.83
VCAM1-205ENST00000603679 PTPN18Q99952 460 aa3.6□□□□□ -1.83
VCAM1-205ENST00000603679 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.6□□□□□ -1.83
VCAM1-205ENST00000603679 LMCD1Q9NZU5 365 aa3.6□□□□□ -1.83
VCAM1-205ENST00000603679 CHPF2Q9P2E5 772 aa3.6□□□□□ -1.83
VCAM1-205ENST00000603679 VTI1BQ9UEU0 232 aa3.6□□□□□ -1.83
VCAM1-205ENST00000603679 SCN10AQ9Y5Y9 1956 aa3.6□□□□□ -1.83
VCAM1-205ENST00000603679 IGF2BP3O00425 579 aaKnown RBP eCLIP3.59□□□□□ -1.83
VCAM1-205ENST00000603679 CXCL11O14625 94 aa3.59□□□□□ -1.83
VCAM1-205ENST00000603679 DNAJC6O75061 913 aa3.59□□□□□ -1.83
VCAM1-205ENST00000603679 C12orf42Q96LP6 360 aa3.59□□□□□ -1.83
VCAM1-205ENST00000603679 GLIS2Q9BZE0 524 aaPredicted RBP3.59□□□□□ -1.83
VCAM1-205ENST00000603679 ACBD3Q9H3P7 528 aa3.59□□□□□ -1.83
VCAM1-205ENST00000603679 TSKSQ9UJT2 592 aa3.59□□□□□ -1.83
VCAM1-205ENST00000603679 ISY1Q9ULR0 285 aaKnown RBP3.59□□□□□ -1.83
VCAM1-205ENST00000603679 INPP5FQ9Y2H2 1132 aa3.59□□□□□ -1.83
VCAM1-205ENST00000603679 GAKO14976 1311 aa3.59□□□□□ -1.83
VCAM1-205ENST00000603679 SH3TC1Q8TE82 1336 aa3.59□□□□□ -1.83
VCAM1-205ENST00000603679 POTEFA5A3E0 1075 aa3.59□□□□□ -1.83
VCAM1-205ENST00000603679 PARNO95453 639 aaKnown RBP3.59□□□□□ -1.83
VCAM1-205ENST00000603679 LACTBP83111 547 aaPredicted RBP3.59□□□□□ -1.83
VCAM1-205ENST00000603679 HSP90AB4PQ58FF6 505 aa3.59□□□□□ -1.83
VCAM1-205ENST00000603679 ERICH6BQ5W0A0 696 aa3.59□□□□□ -1.83
VCAM1-205ENST00000603679 ARMCX6Q7L4S7 300 aa3.59□□□□□ -1.83
VCAM1-205ENST00000603679 VGLL2Q8N8G2 317 aa3.59□□□□□ -1.83
VCAM1-205ENST00000603679 PRIMPOLQ96LW4 560 aa3.59□□□□□ -1.83
VCAM1-205ENST00000603679 SPC25Q9HBM1 224 aa3.59□□□□□ -1.83
VCAM1-205ENST00000603679 PCDH12Q9NPG4 1184 aa3.59□□□□□ -1.83
VCAM1-205ENST00000603679 SYNPO2Q9UMS6 1093 aa3.59□□□□□ -1.83
VCAM1-205ENST00000603679 FAN1Q9Y2M0 1017 aa3.59□□□□□ -1.83
VCAM1-205ENST00000603679 USP16Q9Y5T5 823 aa3.59□□□□□ -1.83
VCAM1-205ENST00000603679 MYH4Q9Y623 1939 aa3.59□□□□□ -1.84
VCAM1-205ENST00000603679 FBLN1P23142 703 aa3.59□□□□□ -1.84
VCAM1-205ENST00000603679 FBF1Q8TES7 1133 aa3.59□□□□□ -1.84
VCAM1-205ENST00000603679 DUSP9Q99956 384 aaKnown RBP3.59□□□□□ -1.84
VCAM1-205ENST00000603679 ANO2Q9NQ90 1003 aa3.59□□□□□ -1.84
VCAM1-205ENST00000603679 KLHL42Q9P2K6 505 aa3.59□□□□□ -1.84
VCAM1-205ENST00000603679 SRRDQ9UH36 339 aa3.59□□□□□ -1.84
VCAM1-205ENST00000603679 GABBR2O75899 941 aa3.58□□□□□ -1.84
VCAM1-205ENST00000603679 TMPOP42166 694 aaKnown RBP3.58□□□□□ -1.84
VCAM1-205ENST00000603679 GPSM2P81274 684 aa3.58□□□□□ -1.84
VCAM1-205ENST00000603679 GUCA2AQ02747 115 aa3.58□□□□□ -1.84
VCAM1-205ENST00000603679 PLEKHG6Q3KR16 790 aa3.58□□□□□ -1.84
VCAM1-205ENST00000603679 PLEKHG4Q58EX7 1191 aa3.58□□□□□ -1.84
VCAM1-205ENST00000603679 HHIPL2Q6UWX4 724 aa3.58□□□□□ -1.84
VCAM1-205ENST00000603679 ARMC9Q7Z3E5 817 aa3.58□□□□□ -1.84
VCAM1-205ENST00000603679 TEX2Q8IWB9 1127 aa3.58□□□□□ -1.84
VCAM1-205ENST00000603679 TDRD7Q8NHU6 1098 aaKnown RBP3.58□□□□□ -1.84
VCAM1-205ENST00000603679 PLXND1Q9Y4D7 1925 aa3.58□□□□□ -1.84
VCAM1-205ENST00000603679 BTBD11A6QL63 1104 aa3.58□□□□□ -1.84
VCAM1-205ENST00000603679 ANP32CO43423 234 aa3.58□□□□□ -1.84
VCAM1-205ENST00000603679 SH3BP5O60239 455 aa3.58□□□□□ -1.84
VCAM1-205ENST00000603679 SGPL1O95470 568 aa3.58□□□□□ -1.84
VCAM1-205ENST00000603679 HOXA7P31268 230 aaPredicted RBP3.58□□□□□ -1.84
VCAM1-205ENST00000603679 DNAJA1P31689 397 aaKnown RBP3.58□□□□□ -1.84
VCAM1-205ENST00000603679 HUNKP57058 714 aa3.58□□□□□ -1.84
VCAM1-205ENST00000603679 JAZF1Q86VZ6 243 aa3.58□□□□□ -1.84
VCAM1-205ENST00000603679 CKAP2LQ8IYA6 745 aa3.58□□□□□ -1.84
VCAM1-205ENST00000603679 SYTL4Q96C24 671 aaPredicted RBP3.58□□□□□ -1.84
VCAM1-205ENST00000603679 DCPSQ96C86 337 aaKnown RBP3.58□□□□□ -1.84
VCAM1-205ENST00000603679 KAZALD1Q96I82 304 aa3.58□□□□□ -1.84
VCAM1-205ENST00000603679 NLRP3Q96P20 1036 aa3.58□□□□□ -1.84
VCAM1-205ENST00000603679 COL25A1Q9BXS0 654 aaPredicted RBP3.58□□□□□ -1.84
VCAM1-205ENST00000603679 IDI2Q9BXS1 227 aa3.58□□□□□ -1.84
VCAM1-205ENST00000603679 ALG13Q9NP73 1137 aaKnown RBP3.58□□□□□ -1.84
VCAM1-205ENST00000603679 HTTP42858 3142 aa3.58□□□□□ -1.84
VCAM1-205ENST00000603679 PRAMEF22A3QJZ6 481 aa3.58□□□□□ -1.84
VCAM1-205ENST00000603679 KIF4AO95239 1232 aa3.58□□□□□ -1.84
VCAM1-205ENST00000603679 F12P00748 615 aaPredicted RBP3.58□□□□□ -1.84
VCAM1-205ENST00000603679 IGFBP4P22692 258 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms