RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 C12orf42Q96LP6 360 aa25.67■■□□□ 1.7
PPFIA3-209ENST00000602783 NUDT12Q9BQG2 462 aa25.67■■□□□ 1.7
PPFIA3-209ENST00000602783 MCM9Q9NXL9 1143 aa25.67■■□□□ 1.7
PPFIA3-209ENST00000602783 RPTORQ8N122 1335 aa25.66■■□□□ 1.7
PPFIA3-209ENST00000602783 USP17L15C9J2P7 530 aa25.66■■□□□ 1.7
PPFIA3-209ENST00000602783 USP17L13C9JLJ4 530 aa25.66■■□□□ 1.7
PPFIA3-209ENST00000602783 USP17L11C9JVI0 530 aa25.66■■□□□ 1.7
PPFIA3-209ENST00000602783 USP17L18D6R9N7 530 aa25.66■■□□□ 1.7
PPFIA3-209ENST00000602783 USP17L22D6RA61 530 aa25.66■■□□□ 1.7
PPFIA3-209ENST00000602783 USP17L17D6RBQ6 530 aa25.66■■□□□ 1.7
PPFIA3-209ENST00000602783 USP17L19D6RCP7 530 aa25.66■■□□□ 1.7
PPFIA3-209ENST00000602783 USP17L20D6RJB6 530 aa25.66■■□□□ 1.7
PPFIA3-209ENST00000602783 MAPK4P31152 587 aa25.66■■□□□ 1.7
PPFIA3-209ENST00000602783 USP14P54578 494 aa25.66■■□□□ 1.7
PPFIA3-209ENST00000602783 USP17L24Q0WX57 530 aa25.66■■□□□ 1.7
PPFIA3-209ENST00000602783 POTEEQ6S8J3 1075 aa25.66■■□□□ 1.7
PPFIA3-209ENST00000602783 ACER1Q8TDN7 264 aa25.66■■□□□ 1.7
PPFIA3-209ENST00000602783 HMX1Q9NP08 348 aaPredicted RBP25.66■■□□□ 1.7
PPFIA3-209ENST00000602783 NR2E3Q9Y5X4 410 aa25.66■■□□□ 1.7
PPFIA3-209ENST00000602783 TCRBV5S4A2TA0A5A2 114 aa25.65■■□□□ 1.7
PPFIA3-209ENST00000602783 TRIB2Q92519 343 aa25.65■■□□□ 1.7
PPFIA3-209ENST00000602783 KIAA1683Q9H0B3 1180 aa25.65■■□□□ 1.7
PPFIA3-209ENST00000602783 PORCNQ9H237 461 aa25.65■■□□□ 1.7
PPFIA3-209ENST00000602783 BOLA2Q9H3K6 86 aa25.65■■□□□ 1.7
PPFIA3-209ENST00000602783 TRIOBPQ9H2D6 2365 aa25.64■■□□□ 1.7
PPFIA3-209ENST00000602783 EVX2Q03828 476 aa25.64■■□□□ 1.7
PPFIA3-209ENST00000602783 LCORLQ8N3X6 602 aa25.64■■□□□ 1.7
PPFIA3-209ENST00000602783 SDR42E1Q8WUS8 393 aa25.64■■□□□ 1.7
PPFIA3-209ENST00000602783 SOCS4Q8WXH5 440 aa25.64■■□□□ 1.7
PPFIA3-209ENST00000602783 PAWRQ96IZ0 340 aaKnown RBP25.64■■□□□ 1.7
PPFIA3-209ENST00000602783 PAG1Q9NWQ8 432 aa25.64■■□□□ 1.7
PPFIA3-209ENST00000602783 PLXNB2O15031 1838 aa25.63■■□□□ 1.69
PPFIA3-209ENST00000602783 GUCY1A2P33402 732 aa25.63■■□□□ 1.69
PPFIA3-209ENST00000602783 GABPAQ06546 454 aa25.63■■□□□ 1.69
PPFIA3-209ENST00000602783 CATSPERGQ6ZRH7 1159 aa25.63■■□□□ 1.69
PPFIA3-209ENST00000602783 GPR142Q7Z601 462 aa25.63■■□□□ 1.69
PPFIA3-209ENST00000602783 DCP1AQ9NPI6 582 aaPredicted RBP25.63■■□□□ 1.69
PPFIA3-209ENST00000602783 RABGAP1Q9Y3P9 1069 aa25.63■■□□□ 1.69
PPFIA3-209ENST00000602783 EVI5O60447 810 aa25.62■■□□□ 1.69
PPFIA3-209ENST00000602783 XRCC5P13010 732 aaKnown RBP25.62■■□□□ 1.69
PPFIA3-209ENST00000602783 VCAM1P19320 739 aa25.62■■□□□ 1.69
PPFIA3-209ENST00000602783 SEPT2Q15019 361 aa25.62■■□□□ 1.69
PPFIA3-209ENST00000602783 PLEKHH3Q7Z736 793 aa25.62■■□□□ 1.69
PPFIA3-209ENST00000602783 ARMT1Q9H993 441 aa25.62■■□□□ 1.69
PPFIA3-209ENST00000602783 MPHOSPH10O00566 681 aaKnown RBP25.61■■□□□ 1.69
PPFIA3-209ENST00000602783 ATP5JP18859 108 aa25.61■■□□□ 1.69
PPFIA3-209ENST00000602783 SLFNL1Q499Z3 407 aa25.61■■□□□ 1.69
PPFIA3-209ENST00000602783 NECAB2Q7Z6G3 386 aa25.61■■□□□ 1.69
PPFIA3-209ENST00000602783 DIS3LQ8TF46 1054 aaKnown RBP25.61■■□□□ 1.69
PPFIA3-209ENST00000602783 LRRCC1Q9C099 1032 aa25.61■■□□□ 1.69
PPFIA3-209ENST00000602783 CWC22Q9HCG8 908 aaKnown RBP25.61■■□□□ 1.69
PPFIA3-209ENST00000602783 CNMDO75829 334 aa25.6■■□□□ 1.69
PPFIA3-209ENST00000602783 CYP2D6P10635 497 aa25.6■■□□□ 1.69
PPFIA3-209ENST00000602783 PRKAR2AP13861 404 aaKnown RBP25.6■■□□□ 1.69
PPFIA3-209ENST00000602783 MORN1Q5T089 497 aa25.6■■□□□ 1.69
PPFIA3-209ENST00000602783 ANKLE1Q8NAG6 615 aa25.6■■□□□ 1.69
PPFIA3-209ENST00000602783 USP6NLQ92738 828 aa25.6■■□□□ 1.69
PPFIA3-209ENST00000602783 RBM27Q9P2N5 1060 aaKnown RBP25.6■■□□□ 1.69
PPFIA3-209ENST00000602783 PRKAB2O43741 272 aa25.59■■□□□ 1.69
PPFIA3-209ENST00000602783 SMARCA5O60264 1052 aaPredicted RBP25.59■■□□□ 1.69
PPFIA3-209ENST00000602783 ADD2P35612 726 aa25.59■■□□□ 1.69
PPFIA3-209ENST00000602783 RGS2P41220 211 aa25.59■■□□□ 1.69
PPFIA3-209ENST00000602783 CCNA1P78396 465 aa25.59■■□□□ 1.69
PPFIA3-209ENST00000602783 MAP3K21Q5TCX8 1036 aa25.59■■□□□ 1.69
PPFIA3-209ENST00000602783 TRMT44Q8IYL2 757 aaKnown RBP25.59■■□□□ 1.69
PPFIA3-209ENST00000602783 HAUS7Q99871 368 aa25.59■■□□□ 1.69
PPFIA3-209ENST00000602783 RPAP3Q9H6T3 665 aaPredicted RBP25.59■■□□□ 1.69
PPFIA3-209ENST00000602783 MBD4O95243 580 aa25.58■■□□□ 1.69
PPFIA3-209ENST00000602783 ZKSCAN1P17029 563 aaPredicted RBP25.58■■□□□ 1.69
PPFIA3-209ENST00000602783 WDR78Q5VTH9 848 aa25.58■■□□□ 1.69
PPFIA3-209ENST00000602783 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.58■■□□□ 1.69
PPFIA3-209ENST00000602783 A0A1W2PRG0 241 aa25.57■■□□□ 1.68
PPFIA3-209ENST00000602783 CACNB2Q08289 660 aaPredicted RBP25.57■■□□□ 1.68
PPFIA3-209ENST00000602783 CCL14Q16627 93 aa25.57■■□□□ 1.68
PPFIA3-209ENST00000602783 SLC44A5Q8NCS7 719 aa25.57■■□□□ 1.68
PPFIA3-209ENST00000602783 DYNLL2Q96FJ2 89 aa25.57■■□□□ 1.68
PPFIA3-209ENST00000602783 MYH8P13535 1937 aa25.57■■□□□ 1.68
PPFIA3-209ENST00000602783 GLRX3O76003 335 aaKnown RBP25.56■■□□□ 1.68
PPFIA3-209ENST00000602783 LBX2Q6XYB7 198 aa25.56■■□□□ 1.68
PPFIA3-209ENST00000602783 APBA2Q99767 749 aa25.56■■□□□ 1.68
PPFIA3-209ENST00000602783 NBPF3Q9H094 633 aa25.56■■□□□ 1.68
PPFIA3-209ENST00000602783 ATP8A2Q9NTI2 1148 aa25.56■■□□□ 1.68
PPFIA3-209ENST00000602783 BTBD7Q9P203 1132 aa25.56■■□□□ 1.68
PPFIA3-209ENST00000602783 SWAP70Q9UH65 585 aa25.56■■□□□ 1.68
PPFIA3-209ENST00000602783 OGDHLQ9ULD0 1010 aa25.56■■□□□ 1.68
PPFIA3-209ENST00000602783 SPDYE16A6NNV3 312 aaPredicted RBP25.55■■□□□ 1.68
PPFIA3-209ENST00000602783 CHGBP05060 677 aa25.55■■□□□ 1.68
PPFIA3-209ENST00000602783 RRP1P56182 461 aaKnown RBP25.55■■□□□ 1.68
PPFIA3-209ENST00000602783 MAP2K5Q13163 448 aa25.55■■□□□ 1.68
PPFIA3-209ENST00000602783 TMEM179Q6ZVK1 233 aa25.55■■□□□ 1.68
PPFIA3-209ENST00000602783 BAZ2AQ9UIF9 1905 aaKnown RBP25.55■■□□□ 1.68
PPFIA3-209ENST00000602783 MNX1P50219 401 aaPredicted RBP25.54■■□□□ 1.68
PPFIA3-209ENST00000602783 UBE3CQ15386 1083 aa25.54■■□□□ 1.68
PPFIA3-209ENST00000602783 PRO3102Q9H379 93 aa25.54■■□□□ 1.68
PPFIA3-209ENST00000602783 PTPREP23469 700 aa25.53■■□□□ 1.68
PPFIA3-209ENST00000602783 YTHDC1Q96MU7 727 aaKnown RBP25.53■■□□□ 1.68
PPFIA3-209ENST00000602783 C11orf49Q9H6J7 331 aa25.53■■□□□ 1.68
PPFIA3-209ENST00000602783 DCTPP1Q9H773 170 aa25.53■■□□□ 1.68
PPFIA3-209ENST00000602783 HOXC10Q9NYD6 342 aa25.53■■□□□ 1.68
PPFIA3-209ENST00000602783 IVNS1ABPQ9Y6Y0 642 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms