RNA–Protein interactions for RNA: ENST00000602516.1

HCG18-244, Transcript of HLA complex group 18, humanhuman

BASIC

Gene HCG18, Length 2,890 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-244ENST00000602516 MAPK8IP1Q9UQF2 711 aa8.67□□□□□ -1.02
HCG18-244ENST00000602516 GCFC2P16383 781 aaKnown RBP8.66□□□□□ -1.02
HCG18-244ENST00000602516 EIF4BP23588 611 aaKnown RBP8.66□□□□□ -1.02
HCG18-244ENST00000602516 FOXO4P98177 505 aa8.66□□□□□ -1.02
HCG18-244ENST00000602516 SFSWAPQ12872 951 aaKnown RBP8.66□□□□□ -1.02
HCG18-244ENST00000602516 CCDC80Q76M96 950 aa8.66□□□□□ -1.02
HCG18-244ENST00000602516 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.66□□□□□ -1.02
HCG18-244ENST00000602516 MIGA1Q8NAN2 632 aa8.66□□□□□ -1.02
HCG18-244ENST00000602516 CEP63Q96MT8 703 aa8.66□□□□□ -1.02
HCG18-244ENST00000602516 SCLT1Q96NL6 688 aa8.66□□□□□ -1.02
HCG18-244ENST00000602516 MTRQ99707 1265 aa8.66□□□□□ -1.02
HCG18-244ENST00000602516 SLC39A3Q9BRY0 314 aa8.66□□□□□ -1.02
HCG18-244ENST00000602516 CLIP2Q9UDT6 1046 aa8.66□□□□□ -1.02
HCG18-244ENST00000602516 SCINQ9Y6U3 715 aa8.66□□□□□ -1.02
HCG18-244ENST00000602516 ATP5J2-PTCD1G3V325 749 aa8.66□□□□□ -1.02
HCG18-244ENST00000602516 PTCD1O75127 700 aaKnown RBP8.66□□□□□ -1.02
HCG18-244ENST00000602516 E2F6O75461 281 aa8.66□□□□□ -1.02
HCG18-244ENST00000602516 ATP5JP18859 108 aa8.66□□□□□ -1.02
HCG18-244ENST00000602516 ELF1P32519 619 aa8.66□□□□□ -1.02
HCG18-244ENST00000602516 PDE4BQ07343 736 aa8.66□□□□□ -1.02
HCG18-244ENST00000602516 TNNI3KQ59H18 835 aa8.66□□□□□ -1.02
HCG18-244ENST00000602516 PARD3BQ8TEW8 1205 aa8.66□□□□□ -1.02
HCG18-244ENST00000602516 MAP4K1Q92918 833 aa8.66□□□□□ -1.02
HCG18-244ENST00000602516 CRISPLD2Q9H0B8 497 aa8.66□□□□□ -1.02
HCG18-244ENST00000602516 RPAP3Q9H6T3 665 aaPredicted RBP8.66□□□□□ -1.02
HCG18-244ENST00000602516 UBAP1Q9NZ09 502 aa8.66□□□□□ -1.02
HCG18-244ENST00000602516 FPGT-TNNI3KV9GXZ4 949 aa8.66□□□□□ -1.02
HCG18-244ENST00000602516 CCDC171Q6TFL3 1326 aa8.65□□□□□ -1.02
HCG18-244ENST00000602516 DPYSL4O14531 572 aa8.65□□□□□ -1.02
HCG18-244ENST00000602516 KRT72Q14CN4 511 aa8.65□□□□□ -1.02
HCG18-244ENST00000602516 POSTNQ15063 836 aa8.65□□□□□ -1.02
HCG18-244ENST00000602516 FAM117BQ6P1L5 589 aa8.65□□□□□ -1.02
HCG18-244ENST00000602516 CCDC65Q8IXS2 484 aa8.65□□□□□ -1.02
HCG18-244ENST00000602516 CCDC191Q8NCU4 936 aa8.65□□□□□ -1.02
HCG18-244ENST00000602516 ANKK1Q8NFD2 765 aa8.65□□□□□ -1.02
HCG18-244ENST00000602516 EZH1Q92800 747 aaPredicted RBP8.65□□□□□ -1.02
HCG18-244ENST00000602516 MMADHCQ9H3L0 296 aaPredicted RBP8.65□□□□□ -1.02
HCG18-244ENST00000602516 ZSWIM6Q9HCJ5 1215 aa8.65□□□□□ -1.02
HCG18-244ENST00000602516 MED23Q9ULK4 1368 aa8.65□□□□□ -1.02
HCG18-244ENST00000602516 ITGB4P16144 1822 aa8.65□□□□□ -1.02
HCG18-244ENST00000602516 RFX7Q2KHR2 1363 aa8.65□□□□□ -1.03
HCG18-244ENST00000602516 AK2P54819 239 aa8.65□□□□□ -1.03
HCG18-244ENST00000602516 NMIQ13287 307 aaPredicted RBP8.65□□□□□ -1.03
HCG18-244ENST00000602516 CRYMQ14894 314 aa8.65□□□□□ -1.03
HCG18-244ENST00000602516 COBLL1Q53SF7 1204 aa8.65□□□□□ -1.03
HCG18-244ENST00000602516 TTLL7Q6ZT98 887 aa8.65□□□□□ -1.03
HCG18-244ENST00000602516 RUFY3Q7L099 469 aa8.65□□□□□ -1.03
HCG18-244ENST00000602516 PCGF5Q86SE9 256 aa8.65□□□□□ -1.03
HCG18-244ENST00000602516 KIAA0825Q8IV33 1275 aa8.65□□□□□ -1.03
HCG18-244ENST00000602516 PPM1EQ8WY54 764 aa8.65□□□□□ -1.03
HCG18-244ENST00000602516 CENPTQ96BT3 561 aa8.65□□□□□ -1.03
HCG18-244ENST00000602516 FAM227BQ96M60 508 aa8.65□□□□□ -1.03
HCG18-244ENST00000602516 RPS6KC1Q96S38 1066 aa8.65□□□□□ -1.03
HCG18-244ENST00000602516 DHX36Q9H2U1 1008 aaKnown RBP8.65□□□□□ -1.03
HCG18-244ENST00000602516 BOLA2Q9H3K6 86 aa8.65□□□□□ -1.03
HCG18-244ENST00000602516 ZMAT5Q9UDW3 170 aaKnown RBP8.65□□□□□ -1.03
HCG18-244ENST00000602516 DBNLQ9UJU6 430 aaKnown RBP8.65□□□□□ -1.03
HCG18-244ENST00000602516 PRR12Q9ULL5 1215 aa8.65□□□□□ -1.03
HCG18-244ENST00000602516 LIMCH1Q9UPQ0 1083 aa8.65□□□□□ -1.03
HCG18-244ENST00000602516 A1BGP04217 495 aa8.64□□□□□ -1.03
HCG18-244ENST00000602516 TCF3P15923 654 aa8.64□□□□□ -1.03
HCG18-244ENST00000602516 ZNF445P59923 1031 aa8.64□□□□□ -1.03
HCG18-244ENST00000602516 TFCP2Q12800 502 aa8.64□□□□□ -1.03
HCG18-244ENST00000602516 DSG2Q14126 1118 aa8.64□□□□□ -1.03
HCG18-244ENST00000602516 SMUG1Q53HV7 270 aa8.64□□□□□ -1.03
HCG18-244ENST00000602516 VPS53Q5VIR6 699 aa8.64□□□□□ -1.03
HCG18-244ENST00000602516 SPC24Q8NBT2 197 aa8.64□□□□□ -1.03
HCG18-244ENST00000602516 MRRFQ96E11 262 aaKnown RBP8.64□□□□□ -1.03
HCG18-244ENST00000602516 INCENPQ9NQS7 918 aa8.64□□□□□ -1.03
HCG18-244ENST00000602516 SEL1LQ9UBV2 794 aa8.64□□□□□ -1.03
HCG18-244ENST00000602516 ADCK5Q3MIX3 580 aa8.64□□□□□ -1.03
HCG18-244ENST00000602516 SMARCC1Q92922 1105 aaPredicted RBP8.64□□□□□ -1.03
HCG18-244ENST00000602516 EMILIN3Q9NT22 766 aa8.64□□□□□ -1.03
HCG18-244ENST00000602516 SPATA31A6Q5VVP1 1343 aa8.64□□□□□ -1.03
HCG18-244ENST00000602516 RPAP1Q9BWH6 1393 aaPredicted RBP8.64□□□□□ -1.03
HCG18-244ENST00000602516 LDHCP07864 332 aa8.63□□□□□ -1.03
HCG18-244ENST00000602516 CASTP20810 708 aaKnown RBP8.63□□□□□ -1.03
HCG18-244ENST00000602516 PRPF40BQ6NWY9 871 aaKnown RBP8.63□□□□□ -1.03
HCG18-244ENST00000602516 LMBR1LQ6UX01 489 aa8.63□□□□□ -1.03
HCG18-244ENST00000602516 CCBE1Q6UXH8 406 aaPredicted RBP8.63□□□□□ -1.03
HCG18-244ENST00000602516 LRRC31Q6UY01 552 aa8.63□□□□□ -1.03
HCG18-244ENST00000602516 KIAA1958Q8N8K9 716 aa8.63□□□□□ -1.03
HCG18-244ENST00000602516 GIMAP7Q8NHV1 300 aa8.63□□□□□ -1.03
HCG18-244ENST00000602516 DDX54Q8TDD1 881 aaKnown RBP8.63□□□□□ -1.03
HCG18-244ENST00000602516 A1CFQ9NQ94 594 aaKnown RBP8.63□□□□□ -1.03
HCG18-244ENST00000602516 CCDC39Q9UFE4 941 aa8.63□□□□□ -1.03
HCG18-244ENST00000602516 COL14A1Q05707 1796 aaKnown RBP8.63□□□□□ -1.03
HCG18-244ENST00000602516 PLCH1Q4KWH8 1693 aa8.63□□□□□ -1.03
HCG18-244ENST00000602516 A0A0D9SFI3 127 aa8.63□□□□□ -1.03
HCG18-244ENST00000602516 PRPF40AO75400 957 aaKnown RBP8.63□□□□□ -1.03
HCG18-244ENST00000602516 NCBP1Q09161 790 aaKnown RBP8.63□□□□□ -1.03
HCG18-244ENST00000602516 CREB3L3Q68CJ9 461 aa8.63□□□□□ -1.03
HCG18-244ENST00000602516 KANK3Q6NY19 840 aa8.63□□□□□ -1.03
HCG18-244ENST00000602516 ATG9AQ7Z3C6 839 aa8.63□□□□□ -1.03
HCG18-244ENST00000602516 DRC7Q8IY82 874 aa8.63□□□□□ -1.03
HCG18-244ENST00000602516 SAMD14Q8IZD0 417 aaPredicted RBP8.63□□□□□ -1.03
HCG18-244ENST00000602516 PDCD7Q8N8D1 485 aaKnown RBP8.63□□□□□ -1.03
HCG18-244ENST00000602516 PIBF1Q8WXW3 757 aa8.63□□□□□ -1.03
HCG18-244ENST00000602516 UPF1Q92900 1129 aaKnown RBP eCLIP8.63□□□□□ -1.03
HCG18-244ENST00000602516 CAPS2Q9BXY5 557 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms