RNA–Protein interactions for RNA: ENST00000601685.1

CAPN12-211, Transcript of calpain 12, human

Gene CAPN12, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN12-211	ENST00000601685	SH3RF1	Q7Z6J0	888 aa		18.82	■□□□□ 0.6
CAPN12-211	ENST00000601685	TMTC1	Q8IUR5	882 aa		18.82	■□□□□ 0.6
CAPN12-211	ENST00000601685	STRN4	Q9NRL3	753 aa		18.82	■□□□□ 0.6
CAPN12-211	ENST00000601685	IDH1	O75874	414 aa	Known RBP	18.82	■□□□□ 0.6
CAPN12-211	ENST00000601685	ABL1	P00519	1130 aa		18.82	■□□□□ 0.6
CAPN12-211	ENST00000601685	CSF1R	P07333	972 aa		18.82	■□□□□ 0.6
CAPN12-211	ENST00000601685	ARHGAP25	P42331	645 aa		18.82	■□□□□ 0.6
CAPN12-211	ENST00000601685	HSP90B2P	Q58FF3	399 aa		18.82	■□□□□ 0.6
CAPN12-211	ENST00000601685	STRBP	Q96SI9	672 aa	Known RBP	18.82	■□□□□ 0.6
CAPN12-211	ENST00000601685	PLA2G12B	Q9BX93	195 aa		18.82	■□□□□ 0.6
CAPN12-211	ENST00000601685	PRDM11	Q9NQV5	511 aa		18.82	■□□□□ 0.6
CAPN12-211	ENST00000601685	AATF	Q9NY61	560 aa	Known RBP eCLIP	18.82	■□□□□ 0.6
CAPN12-211	ENST00000601685	METTL24	Q5JXM2	366 aa		18.81	■□□□□ 0.6
CAPN12-211	ENST00000601685	RIPOR2	Q9Y4F9	1068 aa		18.81	■□□□□ 0.6
CAPN12-211	ENST00000601685		A0A087X0B3	334 aa		18.81	■□□□□ 0.6
CAPN12-211	ENST00000601685	DEXI	O95424	95 aa		18.81	■□□□□ 0.6
CAPN12-211	ENST00000601685	PDE6A	P16499	860 aa		18.81	■□□□□ 0.6
CAPN12-211	ENST00000601685	ERVK-24	P63145	666 aa		18.81	■□□□□ 0.6
CAPN12-211	ENST00000601685	RTN1	Q16799	776 aa		18.81	■□□□□ 0.6
CAPN12-211	ENST00000601685	WDR93	Q6P2C0	686 aa		18.81	■□□□□ 0.6
CAPN12-211	ENST00000601685	FOXR1	Q6PIV2	292 aa		18.81	■□□□□ 0.6
CAPN12-211	ENST00000601685	CCDC102A	Q96A19	550 aa		18.81	■□□□□ 0.6
CAPN12-211	ENST00000601685	PAGE5	Q96GU1	130 aa		18.81	■□□□□ 0.6
CAPN12-211	ENST00000601685	ACBD3	Q9H3P7	528 aa		18.81	■□□□□ 0.6
CAPN12-211	ENST00000601685	MED4	Q9NPJ6	270 aa		18.81	■□□□□ 0.6
CAPN12-211	ENST00000601685	MKRN1	Q9UHC7	482 aa	Known RBP	18.81	■□□□□ 0.6
CAPN12-211	ENST00000601685	MYO5A	Q9Y4I1	1855 aa	Known RBP	18.8	■□□□□ 0.6
CAPN12-211	ENST00000601685	TCRBV5S4A2T	A0A5A2	114 aa		18.8	■□□□□ 0.6
CAPN12-211	ENST00000601685	PPP1R3G	B7ZBB8	358 aa		18.8	■□□□□ 0.6
CAPN12-211	ENST00000601685	ATP2B1	P20020	1258 aa		18.8	■□□□□ 0.6
CAPN12-211	ENST00000601685	AFM	P43652	599 aa		18.8	■□□□□ 0.6
CAPN12-211	ENST00000601685	NOP2	P46087	812 aa	Known RBP	18.8	■□□□□ 0.6
CAPN12-211	ENST00000601685	CADPS2	Q86UW7	1296 aa		18.8	■□□□□ 0.6
CAPN12-211	ENST00000601685	ZBTB9	Q96C00	473 aa		18.8	■□□□□ 0.6
CAPN12-211	ENST00000601685	TACC3	Q9Y6A5	838 aa		18.8	■□□□□ 0.6
CAPN12-211	ENST00000601685	LRRIQ3	A6PVS8	624 aa	Predicted RBP	18.8	■□□□□ 0.6
CAPN12-211	ENST00000601685	AMPD2	Q01433	879 aa		18.8	■□□□□ 0.6
CAPN12-211	ENST00000601685	CTDSPL2	Q05D32	466 aa		18.8	■□□□□ 0.6
CAPN12-211	ENST00000601685	SYNE4	Q8N205	404 aa		18.8	■□□□□ 0.6
CAPN12-211	ENST00000601685	NOA1	Q8NC60	698 aa	Known RBP	18.8	■□□□□ 0.6
CAPN12-211	ENST00000601685	OXER1	Q8TDS5	423 aa		18.8	■□□□□ 0.6
CAPN12-211	ENST00000601685	GSDMA	Q96QA5	445 aa		18.8	■□□□□ 0.6
CAPN12-211	ENST00000601685	PCCA	P05165	728 aa	Predicted RBP	18.79	■□□□□ 0.6
CAPN12-211	ENST00000601685	DPYD	Q12882	1025 aa		18.79	■□□□□ 0.6
CAPN12-211	ENST00000601685	NOM1	Q5C9Z4	860 aa	Known RBP	18.79	■□□□□ 0.6
CAPN12-211	ENST00000601685	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	18.79	■□□□□ 0.6
CAPN12-211	ENST00000601685	AIDA	Q96BJ3	306 aa		18.79	■□□□□ 0.6
CAPN12-211	ENST00000601685	CNNM2	Q9H8M5	875 aa		18.79	■□□□□ 0.6
CAPN12-211	ENST00000601685	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	18.79	■□□□□ 0.6
CAPN12-211	ENST00000601685	CABP5	Q9NP86	173 aa		18.79	■□□□□ 0.6
CAPN12-211	ENST00000601685	ABHD10	Q9NUJ1	306 aa		18.79	■□□□□ 0.6
CAPN12-211	ENST00000601685	MYO6	Q9UM54	1294 aa		18.79	■□□□□ 0.6
CAPN12-211	ENST00000601685	PATL2	C9JE40	543 aa	Known RBP	18.79	■□□□□ 0.6
CAPN12-211	ENST00000601685	NKX1-1	Q15270	411 aa	Predicted RBP	18.79	■□□□□ 0.6
CAPN12-211	ENST00000601685	IFNL3	Q8IZI9	196 aa		18.79	■□□□□ 0.6
CAPN12-211	ENST00000601685	ZFP91	Q96JP5	570 aa	Predicted RBP	18.79	■□□□□ 0.6
CAPN12-211	ENST00000601685	DCC	P43146	1447 aa		18.78	■□□□□ 0.6
CAPN12-211	ENST00000601685	CASP1	P29466	404 aa		18.78	■□□□□ 0.6
CAPN12-211	ENST00000601685	PDE4C	Q08493	712 aa		18.78	■□□□□ 0.6
CAPN12-211	ENST00000601685	TRIM28	Q13263	835 aa	Known RBP	18.78	■□□□□ 0.6
CAPN12-211	ENST00000601685	LRRC31	Q6UY01	552 aa		18.78	■□□□□ 0.6
CAPN12-211	ENST00000601685	CYP26C1	Q6V0L0	522 aa		18.78	■□□□□ 0.6
CAPN12-211	ENST00000601685	GOLGA6L1	Q8N7Z2	621 aa		18.78	■□□□□ 0.6
CAPN12-211	ENST00000601685	EPSTI1	Q96J88	318 aa		18.78	■□□□□ 0.6
CAPN12-211	ENST00000601685	KRT23	Q9C075	422 aa		18.78	■□□□□ 0.6
CAPN12-211	ENST00000601685	MAGEA9	P43362	315 aa		18.78	■□□□□ 0.6
CAPN12-211	ENST00000601685	AKNAD1	Q5T1N1	836 aa		18.78	■□□□□ 0.6
CAPN12-211	ENST00000601685	SMYD4	Q8IYR2	804 aa	Predicted RBP	18.78	■□□□□ 0.6
CAPN12-211	ENST00000601685	NAPB	Q9H115	298 aa		18.78	■□□□□ 0.6
CAPN12-211	ENST00000601685	VIPAS39	Q9H9C1	493 aa		18.78	■□□□□ 0.6
CAPN12-211	ENST00000601685	LIMA1	Q9UHB6	759 aa	Known RBP	18.78	■□□□□ 0.6
CAPN12-211	ENST00000601685	BCL9L	Q86UU0	1499 aa		18.77	■□□□□ 0.6
CAPN12-211	ENST00000601685	PHACTR2	O75167	634 aa		18.77	■□□□□ 0.6
CAPN12-211	ENST00000601685	IL2RB	P14784	551 aa		18.77	■□□□□ 0.6
CAPN12-211	ENST00000601685	CTR9	Q6PD62	1173 aa		18.77	■□□□□ 0.6
CAPN12-211	ENST00000601685	CCDC82	Q8N4S0	544 aa		18.77	■□□□□ 0.6
CAPN12-211	ENST00000601685	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	18.77	■□□□□ 0.6
CAPN12-211	ENST00000601685	LRRC10B	A6NIK2	292 aa		18.77	■□□□□ 0.59
CAPN12-211	ENST00000601685	CCT6A	P40227	531 aa	Known RBP	18.77	■□□□□ 0.59
CAPN12-211	ENST00000601685	KRT31	Q15323	416 aa		18.77	■□□□□ 0.59
CAPN12-211	ENST00000601685	NCAPH2	Q6IBW4	605 aa		18.77	■□□□□ 0.59
CAPN12-211	ENST00000601685	LDHAL6A	Q6ZMR3	332 aa		18.77	■□□□□ 0.59
CAPN12-211	ENST00000601685	FAM204A	Q9H8W3	233 aa		18.77	■□□□□ 0.59
CAPN12-211	ENST00000601685	TNS2	Q63HR2	1409 aa		18.76	■□□□□ 0.59
CAPN12-211	ENST00000601685	CCDC196	A0A1B0GTZ2	297 aa		18.76	■□□□□ 0.59
CAPN12-211	ENST00000601685	TRIM75P	A6NK02	468 aa		18.76	■□□□□ 0.59
CAPN12-211	ENST00000601685	RNF225	M0QZC1	329 aa	Predicted RBP	18.76	■□□□□ 0.59
CAPN12-211	ENST00000601685	AARS	P49588	968 aa	Known RBP eCLIP	18.76	■□□□□ 0.59
CAPN12-211	ENST00000601685	WTAP	Q15007	396 aa		18.76	■□□□□ 0.59
CAPN12-211	ENST00000601685	CMTR1	Q8N1G2	835 aa	Known RBP	18.76	■□□□□ 0.59
CAPN12-211	ENST00000601685	PLCD3	Q8N3E9	789 aa		18.76	■□□□□ 0.59
CAPN12-211	ENST00000601685	CCDC148	Q8NFR7	591 aa		18.76	■□□□□ 0.59
CAPN12-211	ENST00000601685	PAPPA	Q13219	1627 aa		18.76	■□□□□ 0.59
CAPN12-211	ENST00000601685	TIAM2	Q8IVF5	1701 aa		18.76	■□□□□ 0.59
CAPN12-211	ENST00000601685	N4BP3	O15049	544 aa		18.76	■□□□□ 0.59
CAPN12-211	ENST00000601685	TRIM14	Q14142	442 aa		18.76	■□□□□ 0.59
CAPN12-211	ENST00000601685	KIF6	Q6ZMV9	814 aa		18.76	■□□□□ 0.59
CAPN12-211	ENST00000601685	MFSD6	Q6ZSS7	791 aa		18.76	■□□□□ 0.59
CAPN12-211	ENST00000601685	TTLL11	Q8NHH1	800 aa		18.76	■□□□□ 0.59
CAPN12-211	ENST00000601685	SYMPK	Q92797	1274 aa	Known RBP	18.76	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms