RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 SEPT2Q15019 361 aa27.29■■□□□ 1.96
SSBP4-209ENST00000601357 ZYXQ15942 572 aaKnown RBP27.29■■□□□ 1.96
SSBP4-209ENST00000601357 SLC44A5Q8NCS7 719 aa27.29■■□□□ 1.96
SSBP4-209ENST00000601357 SHISA4Q96DD7 197 aa27.29■■□□□ 1.96
SSBP4-209ENST00000601357 GJD2Q9UKL4 321 aa27.29■■□□□ 1.96
SSBP4-209ENST00000601357 PEX10O60683 326 aa27.28■■□□□ 1.96
SSBP4-209ENST00000601357 C12orf60Q5U649 245 aa27.28■■□□□ 1.96
SSBP4-209ENST00000601357 DYNLL2Q96FJ2 89 aa27.28■■□□□ 1.96
SSBP4-209ENST00000601357 BIN2Q9UBW5 565 aaPredicted RBP27.28■■□□□ 1.96
SSBP4-209ENST00000601357 TTC41PQ6P2S7 1318 aa27.27■■□□□ 1.96
SSBP4-209ENST00000601357 SMIM22K7EJ46 135 aa27.27■■□□□ 1.96
SSBP4-209ENST00000601357 GJB1P08034 283 aa27.27■■□□□ 1.96
SSBP4-209ENST00000601357 VCAM1P19320 739 aa27.27■■□□□ 1.96
SSBP4-209ENST00000601357 GPRC5AQ8NFJ5 357 aa27.27■■□□□ 1.96
SSBP4-209ENST00000601357 GTF3C2Q8WUA4 911 aaPredicted RBP27.27■■□□□ 1.96
SSBP4-209ENST00000601357 CRBNQ96SW2 442 aa27.27■■□□□ 1.96
SSBP4-209ENST00000601357 SLC4A4Q9Y6R1 1079 aa27.27■■□□□ 1.96
SSBP4-209ENST00000601357 USP17L15C9J2P7 530 aa27.26■■□□□ 1.95
SSBP4-209ENST00000601357 USP17L13C9JLJ4 530 aa27.26■■□□□ 1.95
SSBP4-209ENST00000601357 USP17L12C9JPN9 530 aa27.26■■□□□ 1.95
SSBP4-209ENST00000601357 USP17L11C9JVI0 530 aa27.26■■□□□ 1.95
SSBP4-209ENST00000601357 USP17L21D6R901 530 aa27.26■■□□□ 1.95
SSBP4-209ENST00000601357 USP17L18D6R9N7 530 aa27.26■■□□□ 1.95
SSBP4-209ENST00000601357 USP17L22D6RA61 530 aa27.26■■□□□ 1.95
SSBP4-209ENST00000601357 USP17L17D6RBQ6 530 aa27.26■■□□□ 1.95
SSBP4-209ENST00000601357 USP17L19D6RCP7 530 aa27.26■■□□□ 1.95
SSBP4-209ENST00000601357 USP17L20D6RJB6 530 aa27.26■■□□□ 1.95
SSBP4-209ENST00000601357 INHAP05111 366 aa27.26■■□□□ 1.95
SSBP4-209ENST00000601357 GJA8P48165 433 aa27.26■■□□□ 1.95
SSBP4-209ENST00000601357 USP17L24Q0WX57 530 aa27.26■■□□□ 1.95
SSBP4-209ENST00000601357 RNF208Q9H0X6 261 aa27.26■■□□□ 1.95
SSBP4-209ENST00000601357 CYP2D7A0A087X1C5 515 aa27.25■■□□□ 1.95
SSBP4-209ENST00000601357 A0A1W2PRG0 241 aa27.25■■□□□ 1.95
SSBP4-209ENST00000601357 ERVK-9P63128 1117 aa27.25■■□□□ 1.95
SSBP4-209ENST00000601357 ERVK-24P63145 666 aa27.25■■□□□ 1.95
SSBP4-209ENST00000601357 CATSPERGQ6ZRH7 1159 aa27.25■■□□□ 1.95
SSBP4-209ENST00000601357 TMEM179Q6ZVK1 233 aa27.25■■□□□ 1.95
SSBP4-209ENST00000601357 NKX2-3Q8TAU0 364 aa27.25■■□□□ 1.95
SSBP4-209ENST00000601357 PI4K2BQ8TCG2 481 aa27.25■■□□□ 1.95
SSBP4-209ENST00000601357 STRBPQ96SI9 672 aaKnown RBP27.25■■□□□ 1.95
SSBP4-209ENST00000601357 UNC93B1Q9H1C4 597 aa27.25■■□□□ 1.95
SSBP4-209ENST00000601357 MPHOSPH10O00566 681 aaKnown RBP27.24■■□□□ 1.95
SSBP4-209ENST00000601357 Q3C1V9 767 aa27.24■■□□□ 1.95
SSBP4-209ENST00000601357 CTR9Q6PD62 1173 aa27.24■■□□□ 1.95
SSBP4-209ENST00000601357 C16orf86Q6ZW13 317 aa27.24■■□□□ 1.95
SSBP4-209ENST00000601357 OTUD7AQ8TE49 926 aaPredicted RBP27.24■■□□□ 1.95
SSBP4-209ENST00000601357 OSBP2Q969R2 916 aa27.24■■□□□ 1.95
SSBP4-209ENST00000601357 DDRGK1Q96HY6 314 aa27.24■■□□□ 1.95
SSBP4-209ENST00000601357 YTHDC1Q96MU7 727 aaKnown RBP27.24■■□□□ 1.95
SSBP4-209ENST00000601357 RNF113AO15541 343 aaKnown RBP27.23■■□□□ 1.95
SSBP4-209ENST00000601357 CDK8P49336 464 aa27.23■■□□□ 1.95
SSBP4-209ENST00000601357 LBX2Q6XYB7 198 aa27.23■■□□□ 1.95
SSBP4-209ENST00000601357 AMOTL1Q8IY63 956 aa27.23■■□□□ 1.95
SSBP4-209ENST00000601357 APPBP2Q92624 585 aa27.23■■□□□ 1.95
SSBP4-209ENST00000601357 SALL3Q9BXA9 1300 aa27.22■■□□□ 1.95
SSBP4-209ENST00000601357 CNMDO75829 334 aa27.22■■□□□ 1.95
SSBP4-209ENST00000601357 ZFYP08048 801 aaPredicted RBP27.22■■□□□ 1.95
SSBP4-209ENST00000601357 AKR1B1P15121 316 aa27.22■■□□□ 1.95
SSBP4-209ENST00000601357 UBE2Q1Q7Z7E8 422 aa27.22■■□□□ 1.95
SSBP4-209ENST00000601357 SIAH1Q8IUQ4 282 aa27.22■■□□□ 1.95
SSBP4-209ENST00000601357 PORCNQ9H237 461 aa27.22■■□□□ 1.95
SSBP4-209ENST00000601357 RABGAP1Q9Y3P9 1069 aa27.22■■□□□ 1.95
SSBP4-209ENST00000601357 GSG1L2A8MUP6 293 aa27.21■■□□□ 1.95
SSBP4-209ENST00000601357 MAPK4P31152 587 aa27.21■■□□□ 1.95
SSBP4-209ENST00000601357 CCDC17Q96LX7 622 aa27.21■■□□□ 1.95
SSBP4-209ENST00000601357 PAGR1Q9BTK6 254 aa27.21■■□□□ 1.95
SSBP4-209ENST00000601357 RPAP3Q9H6T3 665 aaPredicted RBP27.21■■□□□ 1.95
SSBP4-209ENST00000601357 PAK6Q9NQU5 681 aaPredicted RBP27.21■■□□□ 1.95
SSBP4-209ENST00000601357 ARPP21Q9UBL0 812 aaPredicted RBP27.21■■□□□ 1.95
SSBP4-209ENST00000601357 RLFQ13129 1914 aa27.21■■□□□ 1.95
SSBP4-209ENST00000601357 ERC2O15083 957 aa27.2■■□□□ 1.94
SSBP4-209ENST00000601357 GLRX3O76003 335 aaKnown RBP27.2■■□□□ 1.94
SSBP4-209ENST00000601357 GIMAP6Q6P9H5 292 aa27.2■■□□□ 1.94
SSBP4-209ENST00000601357 U2AF1L4Q8WU68 220 aaKnown RBP27.2■■□□□ 1.94
SSBP4-209ENST00000601357 A0A0G2JMZ2 1700 aa27.19■■□□□ 1.94
SSBP4-209ENST00000601357 HMGCRP04035 888 aa27.19■■□□□ 1.94
SSBP4-209ENST00000601357 HDAC1Q13547 482 aaPredicted RBP27.19■■□□□ 1.94
SSBP4-209ENST00000601357 SBK1Q52WX2 424 aa27.19■■□□□ 1.94
SSBP4-209ENST00000601357 CLEC10AQ8IUN9 316 aa27.19■■□□□ 1.94
SSBP4-209ENST00000601357 SOCS4Q8WXH5 440 aa27.19■■□□□ 1.94
SSBP4-209ENST00000601357 USP6NLQ92738 828 aa27.19■■□□□ 1.94
SSBP4-209ENST00000601357 GREB1LQ9C091 1923 aaPredicted RBP27.19■■□□□ 1.94
SSBP4-209ENST00000601357 SPDYE16A6NNV3 312 aaPredicted RBP27.18■■□□□ 1.94
SSBP4-209ENST00000601357 SGPL1O95470 568 aa27.18■■□□□ 1.94
SSBP4-209ENST00000601357 XRCC5P13010 732 aaKnown RBP27.18■■□□□ 1.94
SSBP4-209ENST00000601357 MX1P20591 662 aa27.18■■□□□ 1.94
SSBP4-209ENST00000601357 KIAA1755Q5JYT7 1200 aa27.18■■□□□ 1.94
SSBP4-209ENST00000601357 NUDT12Q9BQG2 462 aa27.18■■□□□ 1.94
SSBP4-209ENST00000601357 TMX2Q9Y320 296 aa27.18■■□□□ 1.94
SSBP4-209ENST00000601357 ROBO3Q96MS0 1386 aa27.18■■□□□ 1.94
SSBP4-209ENST00000601357 GPAA1O43292 621 aa27.17■■□□□ 1.94
SSBP4-209ENST00000601357 ICA1Q05084 483 aa27.17■■□□□ 1.94
SSBP4-209ENST00000601357 GPR142Q7Z601 462 aa27.17■■□□□ 1.94
SSBP4-209ENST00000601357 TRIB2Q92519 343 aa27.17■■□□□ 1.94
SSBP4-209ENST00000601357 BTBD7Q9P203 1132 aa27.17■■□□□ 1.94
SSBP4-209ENST00000601357 PARP14Q460N5 1801 aa27.16■■□□□ 1.94
SSBP4-209ENST00000601357 M0R2C6 588 aa27.16■■□□□ 1.94
SSBP4-209ENST00000601357 CAPN2P17655 700 aa27.16■■□□□ 1.94
SSBP4-209ENST00000601357 LRRFIP1Q32MZ4 808 aaKnown RBP27.16■■□□□ 1.94
SSBP4-209ENST00000601357 MORN1Q5T089 497 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms