RNA–Protein interactions for RNA: ENST00000601170.5

SMG9-211, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG9, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-211ENST00000601170 ERCC6LQ2NKX8 1250 aa16.51■□□□□ 0.23
SMG9-211ENST00000601170 ERFEQ4G0M1 354 aa16.51■□□□□ 0.23
SMG9-211ENST00000601170 NUTM2AQ8IVF1 878 aaPredicted RBP16.51■□□□□ 0.23
SMG9-211ENST00000601170 MARCH10Q8NA82 808 aaPredicted RBP16.51■□□□□ 0.23
SMG9-211ENST00000601170 BRIP1Q9BX63 1249 aa16.51■□□□□ 0.23
SMG9-211ENST00000601170 ROBO1Q9Y6N7 1651 aa16.51■□□□□ 0.23
SMG9-211ENST00000601170 SPATA31A1Q5TZJ5 1347 aa16.51■□□□□ 0.23
SMG9-211ENST00000601170 A0A087X0B3 334 aa16.51■□□□□ 0.23
SMG9-211ENST00000601170 PRPF3O43395 683 aaKnown RBP16.51■□□□□ 0.23
SMG9-211ENST00000601170 PLCD1P51178 756 aa16.51■□□□□ 0.23
SMG9-211ENST00000601170 CAVIN4Q5BKX8 364 aa16.51■□□□□ 0.23
SMG9-211ENST00000601170 SPECC1LQ69YQ0 1117 aa16.51■□□□□ 0.23
SMG9-211ENST00000601170 IQCA1Q86XH1 822 aa16.51■□□□□ 0.23
SMG9-211ENST00000601170 EPSTI1Q96J88 318 aa16.51■□□□□ 0.23
SMG9-211ENST00000601170 BAG1Q99933 345 aaPredicted RBP16.51■□□□□ 0.23
SMG9-211ENST00000601170 SAMSN1Q9NSI8 373 aaKnown RBP16.51■□□□□ 0.23
SMG9-211ENST00000601170 MORC2Q9Y6X9 1032 aaPredicted RBP16.51■□□□□ 0.23
SMG9-211ENST00000601170 V9GY48 417 aaPredicted RBP16.51■□□□□ 0.23
SMG9-211ENST00000601170 ZSCAN12O43309 604 aa16.5■□□□□ 0.23
SMG9-211ENST00000601170 TROAPQ12815 778 aa16.5■□□□□ 0.23
SMG9-211ENST00000601170 ZNF384Q8TF68 577 aa16.5■□□□□ 0.23
SMG9-211ENST00000601170 GTPBP4Q9BZE4 634 aaKnown RBP16.5■□□□□ 0.23
SMG9-211ENST00000601170 RBM28Q9NW13 759 aaKnown RBP16.5■□□□□ 0.23
SMG9-211ENST00000601170 PPP2R2CQ9Y2T4 447 aa16.5■□□□□ 0.23
SMG9-211ENST00000601170 FANCGO15287 622 aa16.5■□□□□ 0.23
SMG9-211ENST00000601170 TC2NQ8N9U0 490 aa16.5■□□□□ 0.23
SMG9-211ENST00000601170 BSDC1Q9NW68 430 aaPredicted RBP16.5■□□□□ 0.23
SMG9-211ENST00000601170 VWA3AA6NCI4 1184 aa16.49■□□□□ 0.23
SMG9-211ENST00000601170 WNT7AO00755 349 aa16.49■□□□□ 0.23
SMG9-211ENST00000601170 ADKP55263 362 aaKnown RBP16.49■□□□□ 0.23
SMG9-211ENST00000601170 SYMPKQ92797 1274 aaKnown RBP16.49■□□□□ 0.23
SMG9-211ENST00000601170 CCDC34Q96HJ3 373 aa16.49■□□□□ 0.23
SMG9-211ENST00000601170 MINPP1Q9UNW1 487 aa16.49■□□□□ 0.23
SMG9-211ENST00000601170 COL5A3P25940 1745 aaPredicted RBP16.49■□□□□ 0.23
SMG9-211ENST00000601170 ERCC5P28715 1186 aaPredicted RBP16.49■□□□□ 0.23
SMG9-211ENST00000601170 AFMP43652 599 aa16.49■□□□□ 0.23
SMG9-211ENST00000601170 SF3B3Q15393 1217 aaKnown RBP16.49■□□□□ 0.23
SMG9-211ENST00000601170 CTR9Q6PD62 1173 aa16.49■□□□□ 0.23
SMG9-211ENST00000601170 FAM84BQ96KN1 310 aaPredicted RBP16.49■□□□□ 0.23
SMG9-211ENST00000601170 THRAP3Q9Y2W1 955 aaKnown RBP16.49■□□□□ 0.23
SMG9-211ENST00000601170 NRAPQ86VF7 1730 aa16.48■□□□□ 0.23
SMG9-211ENST00000601170 STX10O60499 249 aa16.48■□□□□ 0.23
SMG9-211ENST00000601170 FGRP09769 529 aa16.48■□□□□ 0.23
SMG9-211ENST00000601170 SLFN14P0C7P3 912 aa16.48■□□□□ 0.23
SMG9-211ENST00000601170 CALM1P0DP23 149 aa16.48■□□□□ 0.23
SMG9-211ENST00000601170 CALM2P0DP24 149 aa16.48■□□□□ 0.23
SMG9-211ENST00000601170 CALM3P0DP25 149 aa16.48■□□□□ 0.23
SMG9-211ENST00000601170 PCP11498 1178 aaKnown RBP16.48■□□□□ 0.23
SMG9-211ENST00000601170 NOM1Q5C9Z4 860 aaKnown RBP16.48■□□□□ 0.23
SMG9-211ENST00000601170 BRMS1Q9HCU9 246 aa16.48■□□□□ 0.23
SMG9-211ENST00000601170 USP17L12C9JPN9 530 aa16.48■□□□□ 0.23
SMG9-211ENST00000601170 USP17L21D6R901 530 aa16.48■□□□□ 0.23
SMG9-211ENST00000601170 DDAH1O94760 285 aa16.48■□□□□ 0.23
SMG9-211ENST00000601170 ADAMTS2O95450 1211 aa16.48■□□□□ 0.23
SMG9-211ENST00000601170 CASP1P29466 404 aa16.48■□□□□ 0.23
SMG9-211ENST00000601170 EVX2Q03828 476 aa16.48■□□□□ 0.23
SMG9-211ENST00000601170 CLEC4GQ6UXB4 293 aa16.48■□□□□ 0.23
SMG9-211ENST00000601170 TMTC3Q6ZXV5 915 aa16.48■□□□□ 0.23
SMG9-211ENST00000601170 FAM177A1Q8N128 213 aaPredicted RBP16.48■□□□□ 0.23
SMG9-211ENST00000601170 FERMT2Q96AC1 680 aa16.48■□□□□ 0.23
SMG9-211ENST00000601170 PAGE5Q96GU1 130 aa16.48■□□□□ 0.23
SMG9-211ENST00000601170 CNTNAP5Q8WYK1 1306 aa16.47■□□□□ 0.23
SMG9-211ENST00000601170 MYH13Q9UKX3 1938 aa16.47■□□□□ 0.23
SMG9-211ENST00000601170 URI1O94763 535 aaPredicted RBP16.47■□□□□ 0.23
SMG9-211ENST00000601170 BMP15O95972 392 aa16.47■□□□□ 0.23
SMG9-211ENST00000601170 H2AFXP16104 143 aaPredicted RBP16.47■□□□□ 0.23
SMG9-211ENST00000601170 NR1I3Q14994 352 aa16.47■□□□□ 0.23
SMG9-211ENST00000601170 ZNF174Q15697 407 aa16.47■□□□□ 0.23
SMG9-211ENST00000601170 NPY5RQ15761 445 aa16.47■□□□□ 0.23
SMG9-211ENST00000601170 SH3RF1Q7Z6J0 888 aa16.47■□□□□ 0.23
SMG9-211ENST00000601170 CELF1Q92879 486 aaKnown RBP16.47■□□□□ 0.23
SMG9-211ENST00000601170 TNFRSF25Q93038 417 aa16.47■□□□□ 0.23
SMG9-211ENST00000601170 LAMB1P07942 1786 aa16.47■□□□□ 0.23
SMG9-211ENST00000601170 AHDC1Q5TGY3 1603 aaPredicted RBP16.47■□□□□ 0.23
SMG9-211ENST00000601170 A0A1B0GTH6 734 aa16.46■□□□□ 0.23
SMG9-211ENST00000601170 CD44P16070 742 aaKnown RBP16.46■□□□□ 0.23
SMG9-211ENST00000601170 TTC38Q5R3I4 469 aa16.46■□□□□ 0.23
SMG9-211ENST00000601170 KLHL10Q6JEL2 608 aa16.46■□□□□ 0.23
SMG9-211ENST00000601170 TOGARAM2Q6ZUX3 1019 aa16.46■□□□□ 0.23
SMG9-211ENST00000601170 NSUN4Q96CB9 384 aaKnown RBP16.46■□□□□ 0.23
SMG9-211ENST00000601170 SYNRGQ9UMZ2 1314 aa16.46■□□□□ 0.23
SMG9-211ENST00000601170 KLRK1P26718 216 aa16.46■□□□□ 0.23
SMG9-211ENST00000601170 KRT222Q8N1A0 295 aa16.46■□□□□ 0.23
SMG9-211ENST00000601170 ZNF446Q9NWS9 450 aa16.46■□□□□ 0.23
SMG9-211ENST00000601170 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.46■□□□□ 0.23
SMG9-211ENST00000601170 PARP3Q9Y6F1 533 aa16.46■□□□□ 0.23
SMG9-211ENST00000601170 GOLGA6L9A6NEM1 432 aa16.45■□□□□ 0.22
SMG9-211ENST00000601170 NMT2O60551 498 aa16.45■□□□□ 0.22
SMG9-211ENST00000601170 STX17P56962 302 aa16.45■□□□□ 0.22
SMG9-211ENST00000601170 CUL4BQ13620 913 aa16.45■□□□□ 0.22
SMG9-211ENST00000601170 ARHGAP29Q52LW3 1261 aa16.45■□□□□ 0.22
SMG9-211ENST00000601170 APTXQ7Z2E3 356 aaKnown RBP16.45■□□□□ 0.22
SMG9-211ENST00000601170 SRBD1Q8N5C6 995 aaKnown RBP16.45■□□□□ 0.22
SMG9-211ENST00000601170 MNS1Q8NEH6 495 aa16.45■□□□□ 0.22
SMG9-211ENST00000601170 CTCFLQ8NI51 663 aaPredicted RBP16.45■□□□□ 0.22
SMG9-211ENST00000601170 TEX33O43247 280 aa16.45■□□□□ 0.22
SMG9-211ENST00000601170 KCNQ2O43526 872 aa16.45■□□□□ 0.22
SMG9-211ENST00000601170 MECOMQ03112 1051 aa16.45■□□□□ 0.22
SMG9-211ENST00000601170 DPYDQ12882 1025 aa16.45■□□□□ 0.22
SMG9-211ENST00000601170 CT47A1Q5JQC4 288 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms