RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 ZBTB22O15209 634 aa12.25□□□□□ -0.45
HIF3A-219ENST00000600879 SRGAP3O43295 1099 aa12.25□□□□□ -0.45
HIF3A-219ENST00000600879 MAP4K4O95819 1239 aaPredicted RBP12.25□□□□□ -0.45
HIF3A-219ENST00000600879 MCAMP43121 646 aa12.25□□□□□ -0.45
HIF3A-219ENST00000600879 SMAD3P84022 425 aaKnown RBP12.25□□□□□ -0.45
HIF3A-219ENST00000600879 ATP2B2Q01814 1243 aa12.25□□□□□ -0.45
HIF3A-219ENST00000600879 TJAP1Q5JTD0 557 aa12.25□□□□□ -0.45
HIF3A-219ENST00000600879 PRAMEF19Q5SWL8 479 aa12.25□□□□□ -0.45
HIF3A-219ENST00000600879 USP17L2Q6R6M4 530 aa12.25□□□□□ -0.45
HIF3A-219ENST00000600879 SLC39A5Q6ZMH5 540 aa12.25□□□□□ -0.45
HIF3A-219ENST00000600879 SYMPKQ92797 1274 aaKnown RBP12.25□□□□□ -0.45
HIF3A-219ENST00000600879 FEZ1Q99689 392 aa12.25□□□□□ -0.45
HIF3A-219ENST00000600879 PDLIM7Q9NR12 457 aa12.25□□□□□ -0.45
HIF3A-219ENST00000600879 FLT1P17948 1338 aa12.25□□□□□ -0.45
HIF3A-219ENST00000600879 ADCYAP1R1P41586 468 aa12.24□□□□□ -0.45
HIF3A-219ENST00000600879 NAA16Q6N069 864 aaPredicted RBP12.24□□□□□ -0.45
HIF3A-219ENST00000600879 ADGRA1Q86SQ6 560 aa12.24□□□□□ -0.45
HIF3A-219ENST00000600879 RNPC3Q96LT9 517 aaKnown RBP12.24□□□□□ -0.45
HIF3A-219ENST00000600879 DHX36Q9H2U1 1008 aaKnown RBP12.24□□□□□ -0.45
HIF3A-219ENST00000600879 BTBD7Q9P203 1132 aa12.24□□□□□ -0.45
HIF3A-219ENST00000600879 NOB1Q9ULX3 412 aaKnown RBP12.24□□□□□ -0.45
HIF3A-219ENST00000600879 GLRX3O76003 335 aaKnown RBP12.23□□□□□ -0.45
HIF3A-219ENST00000600879 GH2P01242 217 aa12.23□□□□□ -0.45
HIF3A-219ENST00000600879 PTPREP23469 700 aa12.23□□□□□ -0.45
HIF3A-219ENST00000600879 ARID4AP29374 1257 aaPredicted RBP12.23□□□□□ -0.45
HIF3A-219ENST00000600879 CCNA1P78396 465 aa12.23□□□□□ -0.45
HIF3A-219ENST00000600879 GTF3C2Q8WUA4 911 aaPredicted RBP12.23□□□□□ -0.45
HIF3A-219ENST00000600879 RABGAP1Q9Y3P9 1069 aa12.23□□□□□ -0.45
HIF3A-219ENST00000600879 IVNS1ABPQ9Y6Y0 642 aa12.23□□□□□ -0.45
HIF3A-219ENST00000600879 SLC15A5A6NIM6 579 aa12.22□□□□□ -0.45
HIF3A-219ENST00000600879 USP17L15C9J2P7 530 aa12.22□□□□□ -0.45
HIF3A-219ENST00000600879 USP17L13C9JLJ4 530 aa12.22□□□□□ -0.45
HIF3A-219ENST00000600879 KBTBD13C9JR72 458 aa12.22□□□□□ -0.45
HIF3A-219ENST00000600879 USP17L11C9JVI0 530 aa12.22□□□□□ -0.45
HIF3A-219ENST00000600879 USP17L18D6R9N7 530 aa12.22□□□□□ -0.45
HIF3A-219ENST00000600879 USP17L22D6RA61 530 aa12.22□□□□□ -0.45
HIF3A-219ENST00000600879 USP17L17D6RBQ6 530 aa12.22□□□□□ -0.45
HIF3A-219ENST00000600879 USP17L19D6RCP7 530 aa12.22□□□□□ -0.45
HIF3A-219ENST00000600879 USP17L20D6RJB6 530 aa12.22□□□□□ -0.45
HIF3A-219ENST00000600879 E9PSI1 815 aa12.22□□□□□ -0.45
HIF3A-219ENST00000600879 BAG3O95817 575 aa12.22□□□□□ -0.45
HIF3A-219ENST00000600879 CYBAP13498 195 aa12.22□□□□□ -0.45
HIF3A-219ENST00000600879 DYNLL1P63167 89 aaKnown RBP12.22□□□□□ -0.45
HIF3A-219ENST00000600879 TLE2Q04725 743 aa12.22□□□□□ -0.45
HIF3A-219ENST00000600879 USP17L24Q0WX57 530 aa12.22□□□□□ -0.45
HIF3A-219ENST00000600879 CCDC85BQ15834 202 aaPredicted RBP12.22□□□□□ -0.45
HIF3A-219ENST00000600879 ALDH1L2Q3SY69 923 aa12.22□□□□□ -0.45
HIF3A-219ENST00000600879 FOXP4Q8IVH2 680 aaPredicted RBP12.22□□□□□ -0.45
HIF3A-219ENST00000600879 CDCA7LQ96GN5 454 aa12.22□□□□□ -0.45
HIF3A-219ENST00000600879 NECAB3Q96P71 396 aaPredicted RBP12.22□□□□□ -0.45
HIF3A-219ENST00000600879 MSCO60682 206 aa12.21□□□□□ -0.45
HIF3A-219ENST00000600879 HLA-DOAP06340 250 aa12.21□□□□□ -0.45
HIF3A-219ENST00000600879 PLCG2P16885 1265 aa12.21□□□□□ -0.45
HIF3A-219ENST00000600879 DNAJB2P25686 324 aa12.21□□□□□ -0.45
HIF3A-219ENST00000600879 PLA2G5P39877 138 aa12.21□□□□□ -0.45
HIF3A-219ENST00000600879 GRB14Q14449 540 aa12.21□□□□□ -0.45
HIF3A-219ENST00000600879 RAB3GAP1Q15042 981 aa12.21□□□□□ -0.45
HIF3A-219ENST00000600879 ACER1Q8TDN7 264 aa12.21□□□□□ -0.45
HIF3A-219ENST00000600879 HDAC5Q9UQL6 1122 aa12.21□□□□□ -0.45
HIF3A-219ENST00000600879 GRXCR1A8MXD5 290 aa12.2□□□□□ -0.46
HIF3A-219ENST00000600879 UQCRFS1P1P0C7P4 283 aa12.2□□□□□ -0.46
HIF3A-219ENST00000600879 VCAM1P19320 739 aa12.2□□□□□ -0.46
HIF3A-219ENST00000600879 PBX2P40425 430 aa12.2□□□□□ -0.46
HIF3A-219ENST00000600879 SLFN5Q08AF3 891 aa12.2□□□□□ -0.46
HIF3A-219ENST00000600879 FAM47AQ5JRC9 791 aa12.2□□□□□ -0.46
HIF3A-219ENST00000600879 TTC39AQ5SRH9 613 aa12.2□□□□□ -0.46
HIF3A-219ENST00000600879 CATSPERGQ6ZRH7 1159 aa12.2□□□□□ -0.46
HIF3A-219ENST00000600879 DPP9Q86TI2 863 aa12.2□□□□□ -0.46
HIF3A-219ENST00000600879 METTL16Q86W50 562 aaKnown RBP12.2□□□□□ -0.46
HIF3A-219ENST00000600879 ARRDC4Q8NCT1 418 aa12.2□□□□□ -0.46
HIF3A-219ENST00000600879 ADAMTS19Q8TE59 1207 aa12.2□□□□□ -0.46
HIF3A-219ENST00000600879 LENG1Q96BZ8 264 aaPredicted RBP12.2□□□□□ -0.46
HIF3A-219ENST00000600879 FAM122AQ96E09 287 aa12.2□□□□□ -0.46
HIF3A-219ENST00000600879 API5Q9BZZ5 524 aaKnown RBP12.2□□□□□ -0.46
HIF3A-219ENST00000600879 SPDYE16A6NNV3 312 aaPredicted RBP12.19□□□□□ -0.46
HIF3A-219ENST00000600879 PQBP1O60828 265 aaKnown RBP12.19□□□□□ -0.46
HIF3A-219ENST00000600879 COBLO75128 1261 aa12.19□□□□□ -0.46
HIF3A-219ENST00000600879 HOXC6P09630 235 aa12.19□□□□□ -0.46
HIF3A-219ENST00000600879 ADORA2AP29274 412 aa12.19□□□□□ -0.46
HIF3A-219ENST00000600879 PPP4CP60510 307 aa12.19□□□□□ -0.46
HIF3A-219ENST00000600879 MAP3K12Q12852 859 aa12.19□□□□□ -0.46
HIF3A-219ENST00000600879 SNX17Q15036 470 aa12.19□□□□□ -0.46
HIF3A-219ENST00000600879 LRRC41Q15345 812 aa12.19□□□□□ -0.46
HIF3A-219ENST00000600879 MIGA1Q8NAN2 632 aa12.19□□□□□ -0.46
HIF3A-219ENST00000600879 C12orf42Q96LP6 360 aa12.19□□□□□ -0.46
HIF3A-219ENST00000600879 PRDM12Q9H4Q4 367 aa12.19□□□□□ -0.46
HIF3A-219ENST00000600879 ZNF576Q9H609 170 aa12.19□□□□□ -0.46
HIF3A-219ENST00000600879 RPAP3Q9H6T3 665 aaPredicted RBP12.19□□□□□ -0.46
HIF3A-219ENST00000600879 PIH1D3Q9NQM4 214 aaKnown RBP12.19□□□□□ -0.46
HIF3A-219ENST00000600879 GINM1Q9NU53 330 aa12.19□□□□□ -0.46
HIF3A-219ENST00000600879 RLFQ13129 1914 aa12.19□□□□□ -0.46
HIF3A-219ENST00000600879 PGK1P00558 417 aa12.18□□□□□ -0.46
HIF3A-219ENST00000600879 IGHA2P01877 340 aa12.18□□□□□ -0.46
HIF3A-219ENST00000600879 CYP2E1P05181 493 aaPredicted RBP12.18□□□□□ -0.46
HIF3A-219ENST00000600879 HNRNPUQ00839 825 aaKnown RBP eCLIP12.18□□□□□ -0.46
HIF3A-219ENST00000600879 G3BP1Q13283 466 aaKnown RBP eCLIP12.18□□□□□ -0.46
HIF3A-219ENST00000600879 SAMD1Q6SPF0 538 aaPredicted RBP12.18□□□□□ -0.46
HIF3A-219ENST00000600879 ATF7IPQ6VMQ6 1270 aa12.18□□□□□ -0.46
HIF3A-219ENST00000600879 TIFAQ96CG3 184 aa12.18□□□□□ -0.46
HIF3A-219ENST00000600879 DBNDD2Q9BQY9 259 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms