RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 CPA4Q9UI42 421 aa18.85■□□□□ 0.61
RPS28-203ENST00000600659 MYH4Q9Y623 1939 aa18.85■□□□□ 0.61
RPS28-203ENST00000600659 C19orf81C9J6K1 198 aa18.84■□□□□ 0.61
RPS28-203ENST00000600659 RASA1P20936 1047 aa18.84■□□□□ 0.61
RPS28-203ENST00000600659 TDO2P48775 406 aa18.84■□□□□ 0.61
RPS28-203ENST00000600659 MCMDC2Q4G0Z9 681 aa18.84■□□□□ 0.61
RPS28-203ENST00000600659 TMEM179Q6ZVK1 233 aa18.84■□□□□ 0.61
RPS28-203ENST00000600659 OTOP1Q7RTM1 612 aa18.84■□□□□ 0.61
RPS28-203ENST00000600659 ABHD8Q96I13 439 aa18.84■□□□□ 0.61
RPS28-203ENST00000600659 ARHGAP39Q9C0H5 1083 aa18.84■□□□□ 0.61
RPS28-203ENST00000600659 IL25Q9H293 177 aa18.84■□□□□ 0.61
RPS28-203ENST00000600659 TACC3Q9Y6A5 838 aa18.84■□□□□ 0.61
RPS28-203ENST00000600659 MINDY4BA8MYZ0 360 aa18.83■□□□□ 0.61
RPS28-203ENST00000600659 IFFO2Q5TF58 517 aa18.83■□□□□ 0.61
RPS28-203ENST00000600659 SKAP1Q86WV1 359 aa18.83■□□□□ 0.61
RPS28-203ENST00000600659 AMOTL1Q8IY63 956 aa18.83■□□□□ 0.61
RPS28-203ENST00000600659 ERO1AQ96HE7 468 aa18.83■□□□□ 0.61
RPS28-203ENST00000600659 KIAA1683Q9H0B3 1180 aa18.83■□□□□ 0.61
RPS28-203ENST00000600659 CABP5Q9NP86 173 aa18.83■□□□□ 0.61
RPS28-203ENST00000600659 BRCA2P51587 3418 aa18.83■□□□□ 0.6
RPS28-203ENST00000600659 HOXA7P31268 230 aaPredicted RBP18.82■□□□□ 0.6
RPS28-203ENST00000600659 LACTBP83111 547 aaPredicted RBP18.82■□□□□ 0.6
RPS28-203ENST00000600659 POTEEQ6S8J3 1075 aa18.82■□□□□ 0.6
RPS28-203ENST00000600659 CCDC17Q96LX7 622 aa18.82■□□□□ 0.6
RPS28-203ENST00000600659 A0A0G2JMZ2 1700 aa18.82■□□□□ 0.6
RPS28-203ENST00000600659 CCDC171Q6TFL3 1326 aa18.82■□□□□ 0.6
RPS28-203ENST00000600659 MPHOSPH10O00566 681 aaKnown RBP18.81■□□□□ 0.6
RPS28-203ENST00000600659 APPP05067 770 aa18.81■□□□□ 0.6
RPS28-203ENST00000600659 HSPD1P10809 573 aaKnown RBP18.81■□□□□ 0.6
RPS28-203ENST00000600659 ALX1Q15699 326 aa18.81■□□□□ 0.6
RPS28-203ENST00000600659 ZYXQ15942 572 aaKnown RBP18.81■□□□□ 0.6
RPS28-203ENST00000600659 KIAA1755Q5JYT7 1200 aa18.81■□□□□ 0.6
RPS28-203ENST00000600659 STK11IPQ8N1F8 1099 aa18.81■□□□□ 0.6
RPS28-203ENST00000600659 NACAP1Q9BZK3 213 aa18.81■□□□□ 0.6
RPS28-203ENST00000600659 NAPBQ9H115 298 aa18.81■□□□□ 0.6
RPS28-203ENST00000600659 ASCC2Q9H1I8 757 aaPredicted RBP18.81■□□□□ 0.6
RPS28-203ENST00000600659 PLIN4Q96Q06 1357 aa18.81■□□□□ 0.6
RPS28-203ENST00000600659 ZMYM6O95789 1325 aa18.81■□□□□ 0.6
RPS28-203ENST00000600659 PLXNB2O15031 1838 aa18.8■□□□□ 0.6
RPS28-203ENST00000600659 IGKV6D-41A0A0C4DH26 115 aa18.8■□□□□ 0.6
RPS28-203ENST00000600659 PPARAQ07869 468 aa18.8■□□□□ 0.6
RPS28-203ENST00000600659 USP17L2Q6R6M4 530 aa18.8■□□□□ 0.6
RPS28-203ENST00000600659 CENPQQ7L2Z9 268 aaPredicted RBP18.8■□□□□ 0.6
RPS28-203ENST00000600659 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.8■□□□□ 0.6
RPS28-203ENST00000600659 TRIM17Q9Y577 477 aa18.8■□□□□ 0.6
RPS28-203ENST00000600659 PRDM1O75626 825 aa18.79■□□□□ 0.6
RPS28-203ENST00000600659 VCAM1P19320 739 aa18.79■□□□□ 0.6
RPS28-203ENST00000600659 CWC27Q6UX04 472 aaKnown RBP18.79■□□□□ 0.6
RPS28-203ENST00000600659 TMOD4Q9NZQ9 345 aa18.79■□□□□ 0.6
RPS28-203ENST00000600659 ANAPC4Q9UJX5 808 aa18.79■□□□□ 0.6
RPS28-203ENST00000600659 PNMA3Q9UL41 463 aa18.79■□□□□ 0.6
RPS28-203ENST00000600659 FGAP02671 866 aa18.78■□□□□ 0.6
RPS28-203ENST00000600659 ICA1Q05084 483 aa18.78■□□□□ 0.6
RPS28-203ENST00000600659 PKN2Q16513 984 aaKnown RBP18.78■□□□□ 0.6
RPS28-203ENST00000600659 FBXO46Q6PJ61 603 aaPredicted RBP18.78■□□□□ 0.6
RPS28-203ENST00000600659 TRIM47Q96LD4 638 aa18.78■□□□□ 0.6
RPS28-203ENST00000600659 FEZ1Q99689 392 aa18.78■□□□□ 0.6
RPS28-203ENST00000600659 NBPF3Q9H094 633 aa18.78■□□□□ 0.6
RPS28-203ENST00000600659 EFCC1Q9HA90 598 aa18.78■□□□□ 0.6
RPS28-203ENST00000600659 TMX2Q9Y320 296 aa18.78■□□□□ 0.6
RPS28-203ENST00000600659 PEX10O60683 326 aa18.77■□□□□ 0.6
RPS28-203ENST00000600659 USP14P54578 494 aa18.77■□□□□ 0.6
RPS28-203ENST00000600659 CTDSPL2Q05D32 466 aa18.77■□□□□ 0.6
RPS28-203ENST00000600659 SMCR8Q8TEV9 937 aaPredicted RBP18.77■□□□□ 0.6
RPS28-203ENST00000600659 P2RX7Q99572 595 aaKnown RBP18.77■□□□□ 0.6
RPS28-203ENST00000600659 INCENPQ9NQS7 918 aa18.77■□□□□ 0.6
RPS28-203ENST00000600659 HPS5Q9UPZ3 1129 aa18.77■□□□□ 0.6
RPS28-203ENST00000600659 COL11A1P12107 1806 aaPredicted RBP18.77■□□□□ 0.6
RPS28-203ENST00000600659 FGRP09769 529 aa18.76■□□□□ 0.59
RPS28-203ENST00000600659 EEF2P13639 858 aaKnown RBP18.76■□□□□ 0.59
RPS28-203ENST00000600659 PABPC4Q13310 644 aaKnown RBP eCLIP18.76■□□□□ 0.598e-9■■□□□ 14.3
RPS28-203ENST00000600659 FAM110CQ1W6H9 321 aa18.76■□□□□ 0.59
RPS28-203ENST00000600659 CATSPERGQ6ZRH7 1159 aa18.76■□□□□ 0.59
RPS28-203ENST00000600659 ANKRD13CQ8N6S4 541 aa18.76■□□□□ 0.59
RPS28-203ENST00000600659 NKX2-3Q8TAU0 364 aa18.76■□□□□ 0.59
RPS28-203ENST00000600659 MKNK2Q9HBH9 465 aa18.76■□□□□ 0.59
RPS28-203ENST00000600659 TXNRD2Q9NNW7 524 aa18.76■□□□□ 0.59
RPS28-203ENST00000600659 DIAPH3Q9NSV4 1193 aa18.76■□□□□ 0.59
RPS28-203ENST00000600659 PTPN22Q9Y2R2 807 aa18.76■□□□□ 0.59
RPS28-203ENST00000600659 HIP1O00291 1037 aa18.75■□□□□ 0.59
RPS28-203ENST00000600659 OSBPP22059 807 aa18.75■□□□□ 0.59
RPS28-203ENST00000600659 HERVK_113P62684 666 aa18.75■□□□□ 0.59
RPS28-203ENST00000600659 VCPKMTQ9H867 229 aa18.75■□□□□ 0.59
RPS28-203ENST00000600659 KANSL2Q9H9L4 492 aa18.75■□□□□ 0.59
RPS28-203ENST00000600659 MORF4L1Q9UBU8 362 aa18.75■□□□□ 0.59
RPS28-203ENST00000600659 RBBP6Q7Z6E9 1792 aaKnown RBP18.75■□□□□ 0.59
RPS28-203ENST00000600659 CNMDO75829 334 aa18.74■□□□□ 0.59
RPS28-203ENST00000600659 ECM2O94769 699 aaPredicted RBP18.74■□□□□ 0.59
RPS28-203ENST00000600659 CHMLP26374 656 aa18.74■□□□□ 0.59
RPS28-203ENST00000600659 PSMC4P43686 418 aa18.74■□□□□ 0.59
RPS28-203ENST00000600659 GCLCP48506 637 aaPredicted RBP18.74■□□□□ 0.59
RPS28-203ENST00000600659 IRX3P78415 501 aaPredicted RBP18.74■□□□□ 0.59
RPS28-203ENST00000600659 RPAP3Q9H6T3 665 aaPredicted RBP18.74■□□□□ 0.59
RPS28-203ENST00000600659 ARHGEF10LQ9HCE6 1279 aa18.74■□□□□ 0.59
RPS28-203ENST00000600659 RBPJLQ9UBG7 517 aa18.74■□□□□ 0.59
RPS28-203ENST00000600659 USP17L15C9J2P7 530 aa18.74■□□□□ 0.59
RPS28-203ENST00000600659 USP17L13C9JLJ4 530 aa18.74■□□□□ 0.59
RPS28-203ENST00000600659 USP17L11C9JVI0 530 aa18.74■□□□□ 0.59
RPS28-203ENST00000600659 USP17L18D6R9N7 530 aa18.74■□□□□ 0.59
RPS28-203ENST00000600659 USP17L22D6RA61 530 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms