RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 NOVP48745 357 aa23.26■■□□□ 1.31
PNKP-214ENST00000600573 MRE11P49959 708 aa23.26■■□□□ 1.31
PNKP-214ENST00000600573 AKAP17AQ02040 695 aaKnown RBP23.26■■□□□ 1.31
PNKP-214ENST00000600573 TMEM63CQ9P1W3 806 aa23.26■■□□□ 1.31
PNKP-214ENST00000600573 PLIN4Q96Q06 1357 aa23.26■■□□□ 1.31
PNKP-214ENST00000600573 BRCA1P38398 1863 aaKnown RBP23.26■■□□□ 1.31
PNKP-214ENST00000600573 COL2A1P02458 1487 aaPredicted RBP23.26■■□□□ 1.31
PNKP-214ENST00000600573 RPS12P25398 132 aaKnown RBP23.26■■□□□ 1.31
PNKP-214ENST00000600573 FOSBP53539 338 aa23.26■■□□□ 1.31
PNKP-214ENST00000600573 DLGAP5Q15398 846 aa23.26■■□□□ 1.31
PNKP-214ENST00000600573 SLC4A8Q2Y0W8 1093 aa23.26■■□□□ 1.31
PNKP-214ENST00000600573 SLC26A6Q9BXS9 759 aa23.26■■□□□ 1.31
PNKP-214ENST00000600573 MYH1P12882 1939 aa23.25■■□□□ 1.31
PNKP-214ENST00000600573 NFKBIEO00221 500 aa23.25■■□□□ 1.31
PNKP-214ENST00000600573 CXCL9Q07325 125 aa23.25■■□□□ 1.31
PNKP-214ENST00000600573 FKBP1CQ5VVH2 108 aa23.25■■□□□ 1.31
PNKP-214ENST00000600573 BRAPQ7Z569 592 aa23.25■■□□□ 1.31
PNKP-214ENST00000600573 NBPF11Q86T75 865 aa23.25■■□□□ 1.31
PNKP-214ENST00000600573 SLC44A5Q8NCS7 719 aa23.25■■□□□ 1.31
PNKP-214ENST00000600573 ZNF396Q96N95 335 aaPredicted RBP23.25■■□□□ 1.31
PNKP-214ENST00000600573 SPDYE2BA6NHP3 402 aa23.24■■□□□ 1.31
PNKP-214ENST00000600573 PRPF3O43395 683 aaKnown RBP23.24■■□□□ 1.31
PNKP-214ENST00000600573 SPDYE6P0CI01 402 aa23.24■■□□□ 1.31
PNKP-214ENST00000600573 XBP1P17861 261 aa23.24■■□□□ 1.31
PNKP-214ENST00000600573 NFIAQ12857 509 aa23.24■■□□□ 1.31
PNKP-214ENST00000600573 PNMA1Q8ND90 353 aa23.24■■□□□ 1.31
PNKP-214ENST00000600573 PHKBQ93100 1093 aa23.24■■□□□ 1.31
PNKP-214ENST00000600573 LZTS2Q9BRK4 669 aa23.24■■□□□ 1.31
PNKP-214ENST00000600573 FAM198AQ9UFP1 575 aa23.24■■□□□ 1.31
PNKP-214ENST00000600573 FER1L6Q2WGJ9 1857 aa23.24■■□□□ 1.31
PNKP-214ENST00000600573 NMT2O60551 498 aa23.23■■□□□ 1.31
PNKP-214ENST00000600573 PRMT6Q96LA8 375 aaPredicted RBP23.23■■□□□ 1.31
PNKP-214ENST00000600573 GRPEL1Q9HAV7 217 aa23.23■■□□□ 1.31
PNKP-214ENST00000600573 MYH6P13533 1939 aa23.23■■□□□ 1.31
PNKP-214ENST00000600573 TOP1P11387 765 aaKnown RBP23.22■■□□□ 1.31
PNKP-214ENST00000600573 FAM173BQ6P4H8 233 aa23.22■■□□□ 1.31
PNKP-214ENST00000600573 TMTC3Q6ZXV5 915 aa23.22■■□□□ 1.31
PNKP-214ENST00000600573 METTL16Q86W50 562 aaKnown RBP23.22■■□□□ 1.31
PNKP-214ENST00000600573 TDRD3Q9H7E2 651 aaKnown RBP23.22■■□□□ 1.31
PNKP-214ENST00000600573 ATRNL1Q5VV63 1379 aa23.22■■□□□ 1.31
PNKP-214ENST00000600573 MYO1BO43795 1136 aa23.22■■□□□ 1.31
PNKP-214ENST00000600573 GAS2L3Q86XJ1 694 aa23.22■■□□□ 1.31
PNKP-214ENST00000600573 SPATA32Q96LK8 384 aa23.22■■□□□ 1.31
PNKP-214ENST00000600573 TRIM34Q9BYJ4 488 aa23.22■■□□□ 1.31
PNKP-214ENST00000600573 STX8Q9UNK0 236 aa23.22■■□□□ 1.31
PNKP-214ENST00000600573 SAFBQ15424 915 aaKnown RBP eCLIP23.21■■□□□ 1.31
PNKP-214ENST00000600573 LEO1Q8WVC0 666 aaPredicted RBP23.21■■□□□ 1.31
PNKP-214ENST00000600573 TMEM47Q9BQJ4 181 aa23.21■■□□□ 1.31
PNKP-214ENST00000600573 COL4A5P29400 1685 aa23.2■■□□□ 1.3
PNKP-214ENST00000600573 SMARCA1P28370 1054 aa23.2■■□□□ 1.3
PNKP-214ENST00000600573 EIF6P56537 245 aaKnown RBP23.2■■□□□ 1.3
PNKP-214ENST00000600573 FUT2Q10981 343 aa23.2■■□□□ 1.3
PNKP-214ENST00000600573 GRM4Q14833 912 aa23.2■■□□□ 1.3
PNKP-214ENST00000600573 CCDC183Q5T5S1 534 aa23.2■■□□□ 1.3
PNKP-214ENST00000600573 ZSCAN29Q8IWY8 852 aaPredicted RBP23.2■■□□□ 1.3
PNKP-214ENST00000600573 IGKV6D-41A0A0C4DH26 115 aa23.19■■□□□ 1.3
PNKP-214ENST00000600573 PPFIA3O75145 1194 aa23.19■■□□□ 1.3
PNKP-214ENST00000600573 SHMT1P34896 483 aa23.19■■□□□ 1.3
PNKP-214ENST00000600573 GUCY1B3Q02153 619 aa23.19■■□□□ 1.3
PNKP-214ENST00000600573 KRT40Q6A162 431 aa23.19■■□□□ 1.3
PNKP-214ENST00000600573 FAM177A1Q8N128 213 aaPredicted RBP23.19■■□□□ 1.3
PNKP-214ENST00000600573 DPF2Q92785 391 aa23.19■■□□□ 1.3
PNKP-214ENST00000600573 SPDYE2Q495Y8 402 aa23.19■■□□□ 1.3
PNKP-214ENST00000600573 FAM151AQ8WW52 585 aa23.19■■□□□ 1.3
PNKP-214ENST00000600573 MTMR4Q9NYA4 1195 aa23.19■■□□□ 1.3
PNKP-214ENST00000600573 ZNF70Q9UC06 446 aaPredicted RBP23.19■■□□□ 1.3
PNKP-214ENST00000600573 ZBTB12Q9Y330 459 aaPredicted RBP23.19■■□□□ 1.3
PNKP-214ENST00000600573 PCDHAC2Q9Y5I4 1007 aa23.19■■□□□ 1.3
PNKP-214ENST00000600573 FZD9O00144 591 aa23.18■■□□□ 1.3
PNKP-214ENST00000600573 XRCC6P12956 609 aaKnown RBP eCLIP23.18■■□□□ 1.3
PNKP-214ENST00000600573 KIF23Q02241 960 aaPredicted RBP23.18■■□□□ 1.3
PNKP-214ENST00000600573 TCP10Q12799 353 aa23.18■■□□□ 1.3
PNKP-214ENST00000600573 TATDN1Q6P1N9 297 aa23.18■■□□□ 1.3
PNKP-214ENST00000600573 LRSAM1Q6UWE0 723 aa23.18■■□□□ 1.3
PNKP-214ENST00000600573 FAM83AQ86UY5 434 aa23.18■■□□□ 1.3
PNKP-214ENST00000600573 CEP95Q96GE4 821 aa23.18■■□□□ 1.3
PNKP-214ENST00000600573 TFIP11Q9UBB9 837 aaKnown RBP23.18■■□□□ 1.3
PNKP-214ENST00000600573 HERC5Q9UII4 1024 aaKnown RBP23.18■■□□□ 1.3
PNKP-214ENST00000600573 TTLL1O95922 423 aa23.17■■□□□ 1.3
PNKP-214ENST00000600573 ZNF280AP59817 542 aaPredicted RBP23.17■■□□□ 1.3
PNKP-214ENST00000600573 ZFPM1Q8IX07 1006 aa23.17■■□□□ 1.3
PNKP-214ENST00000600573 ZBED3Q96IU2 234 aaPredicted RBP23.17■■□□□ 1.3
PNKP-214ENST00000600573 SYCE3A1L190 88 aa23.16■■□□□ 1.3
PNKP-214ENST00000600573 DDTLA6NHG4 134 aaPredicted RBP23.16■■□□□ 1.3
PNKP-214ENST00000600573 LETM1O95202 739 aaPredicted RBP23.16■■□□□ 1.3
PNKP-214ENST00000600573 U2AF2P26368 475 aaKnown RBP eCLIP23.16■■□□□ 1.34e-8■□□□□ 9.6
PNKP-214ENST00000600573 CACNB3P54284 484 aa23.16■■□□□ 1.3
PNKP-214ENST00000600573 NLGN2Q8NFZ4 835 aa23.16■■□□□ 1.3
PNKP-214ENST00000600573 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.16■■□□□ 1.3
PNKP-214ENST00000600573 PALM3A6NDB9 673 aaPredicted RBP23.15■■□□□ 1.3
PNKP-214ENST00000600573 GOLGA6L4A6NEF3 574 aa23.15■■□□□ 1.3
PNKP-214ENST00000600573 AKR1B1P15121 316 aa23.15■■□□□ 1.3
PNKP-214ENST00000600573 GNL2Q13823 731 aaKnown RBP23.15■■□□□ 1.3
PNKP-214ENST00000600573 CERKLQ49MI3 558 aaPredicted RBP23.15■■□□□ 1.3
PNKP-214ENST00000600573 SH3BP5LQ7L8J4 393 aa23.15■■□□□ 1.3
PNKP-214ENST00000600573 SRBD1Q8N5C6 995 aaKnown RBP23.15■■□□□ 1.3
PNKP-214ENST00000600573 FOXP1Q9H334 677 aaPredicted RBP23.15■■□□□ 1.3
PNKP-214ENST00000600573 RCOR1Q9UKL0 485 aa23.15■■□□□ 1.3
PNKP-214ENST00000600573 V9GY48 417 aaPredicted RBP23.15■■□□□ 1.3
PNKP-214ENST00000600573 PLEKHA8P1O95397 391 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms