RNA–Protein interactions for RNA: ENST00000599421.1

LINC00649-210, long intergenic non-protein coding RNA 649, humanhuman

TSL 2

Gene LINC00649, Length 728 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-210ENST00000599421 SPATA5Q8NB90 893 aa11.59□□□□□ -0.55
LINC00649-210ENST00000599421 NSUN4Q96CB9 384 aaKnown RBP11.59□□□□□ -0.55
LINC00649-210ENST00000599421 NEUROD6Q96NK8 337 aa11.59□□□□□ -0.55
LINC00649-210ENST00000599421 PI4KBQ9UBF8 816 aa11.59□□□□□ -0.55
LINC00649-210ENST00000599421 PRKAG2Q9UGJ0 569 aa11.59□□□□□ -0.55
LINC00649-210ENST00000599421 USP17L10C9JJH3 530 aa11.58□□□□□ -0.56
LINC00649-210ENST00000599421 MSCO60682 206 aa11.58□□□□□ -0.56
LINC00649-210ENST00000599421 ARID4AP29374 1257 aaPredicted RBP11.58□□□□□ -0.56
LINC00649-210ENST00000599421 MAP2K5Q13163 448 aa11.58□□□□□ -0.56
LINC00649-210ENST00000599421 SHROOM1Q2M3G4 852 aaPredicted RBP11.58□□□□□ -0.56
LINC00649-210ENST00000599421 MFSD14CQ5VZR4 134 aa11.58□□□□□ -0.56
LINC00649-210ENST00000599421 PAGR1Q9BTK6 254 aa11.58□□□□□ -0.56
LINC00649-210ENST00000599421 DHX36Q9H2U1 1008 aaKnown RBP11.58□□□□□ -0.56
LINC00649-210ENST00000599421 SEMA6BQ9H3T3 888 aa11.58□□□□□ -0.56
LINC00649-210ENST00000599421 GINM1Q9NU53 330 aa11.58□□□□□ -0.56
LINC00649-210ENST00000599421 SMCHD1A6NHR9 2005 aa11.57□□□□□ -0.56
LINC00649-210ENST00000599421 MYH8P13535 1937 aa11.57□□□□□ -0.56
LINC00649-210ENST00000599421 DNM1LO00429 736 aa11.57□□□□□ -0.56
LINC00649-210ENST00000599421 ATN1P54259 1190 aaPredicted RBP11.57□□□□□ -0.56
LINC00649-210ENST00000599421 RTP1P59025 263 aa11.57□□□□□ -0.56
LINC00649-210ENST00000599421 JAG1P78504 1218 aa11.57□□□□□ -0.56
LINC00649-210ENST00000599421 CEP85Q6P2H3 762 aa11.57□□□□□ -0.56
LINC00649-210ENST00000599421 POTEEQ6S8J3 1075 aa11.57□□□□□ -0.56
LINC00649-210ENST00000599421 ADGRA1Q86SQ6 560 aa11.57□□□□□ -0.56
LINC00649-210ENST00000599421 SH3RF3Q8TEJ3 882 aaPredicted RBP11.57□□□□□ -0.56
LINC00649-210ENST00000599421 LPAR1Q92633 364 aa11.57□□□□□ -0.56
LINC00649-210ENST00000599421 EDC3Q96F86 508 aaKnown RBP11.57□□□□□ -0.56
LINC00649-210ENST00000599421 DNAJC18Q9H819 358 aa11.57□□□□□ -0.56
LINC00649-210ENST00000599421 CWC22Q9HCG8 908 aaKnown RBP11.57□□□□□ -0.56
LINC00649-210ENST00000599421 SNRKQ9NRH2 765 aa11.57□□□□□ -0.56
LINC00649-210ENST00000599421 DDX20Q9UHI6 824 aaKnown RBP11.57□□□□□ -0.56
LINC00649-210ENST00000599421 AKAP2Q9Y2D5 859 aa11.57□□□□□ -0.56
LINC00649-210ENST00000599421 GLRX3O76003 335 aaKnown RBP11.56□□□□□ -0.56
LINC00649-210ENST00000599421 SMAD3P84022 425 aaKnown RBP11.56□□□□□ -0.56
LINC00649-210ENST00000599421 ATP8B2P98198 1209 aa11.56□□□□□ -0.56
LINC00649-210ENST00000599421 SHHQ15465 462 aa11.56□□□□□ -0.56
LINC00649-210ENST00000599421 METTL16Q86W50 562 aaKnown RBP11.56□□□□□ -0.56
LINC00649-210ENST00000599421 SMC5Q8IY18 1101 aa11.56□□□□□ -0.56
LINC00649-210ENST00000599421 SYMPKQ92797 1274 aaKnown RBP11.56□□□□□ -0.56
LINC00649-210ENST00000599421 DBNDD2Q9BQY9 259 aa11.56□□□□□ -0.56
LINC00649-210ENST00000599421 FLRT1Q9NZU1 646 aa11.56□□□□□ -0.56
LINC00649-210ENST00000599421 RAI14Q9P0K7 980 aa11.56□□□□□ -0.56
LINC00649-210ENST00000599421 ZBTB47Q9UFB7 747 aaPredicted RBP11.56□□□□□ -0.56
LINC00649-210ENST00000599421 ZBTB21Q9ULJ3 1066 aa11.56□□□□□ -0.56
LINC00649-210ENST00000599421 RABGAP1Q9Y3P9 1069 aa11.56□□□□□ -0.56
LINC00649-210ENST00000599421 SLC15A5A6NIM6 579 aa11.55□□□□□ -0.56
LINC00649-210ENST00000599421 GDF11O95390 407 aa11.55□□□□□ -0.56
LINC00649-210ENST00000599421 HOXC6P09630 235 aa11.55□□□□□ -0.56
LINC00649-210ENST00000599421 CCNA1P78396 465 aa11.55□□□□□ -0.56
LINC00649-210ENST00000599421 C9orf50Q5SZB4 431 aa11.55□□□□□ -0.56
LINC00649-210ENST00000599421 USP17L2Q6R6M4 530 aa11.55□□□□□ -0.56
LINC00649-210ENST00000599421 FOXP4Q8IVH2 680 aaPredicted RBP11.55□□□□□ -0.56
LINC00649-210ENST00000599421 SIRT2Q8IXJ6 389 aa11.55□□□□□ -0.56
LINC00649-210ENST00000599421 MYLIPQ8WY64 445 aa11.55□□□□□ -0.56
LINC00649-210ENST00000599421 NOL10Q9BSC4 688 aaKnown RBP11.55□□□□□ -0.56
LINC00649-210ENST00000599421 TTYH1Q9H313 450 aaPredicted RBP11.55□□□□□ -0.56
LINC00649-210ENST00000599421 EMILIN3Q9NT22 766 aa11.55□□□□□ -0.56
LINC00649-210ENST00000599421 AATFQ9NY61 560 aaKnown RBP eCLIP11.55□□□□□ -0.56
LINC00649-210ENST00000599421 TLR7Q9NYK1 1049 aaKnown RBP11.55□□□□□ -0.56
LINC00649-210ENST00000599421 ATP11BQ9Y2G3 1177 aa11.55□□□□□ -0.56
LINC00649-210ENST00000599421 ZNFX1Q9P2E3 1918 aaKnown RBP11.54□□□□□ -0.56
LINC00649-210ENST00000599421 ZNF236Q9UL36 1845 aa11.54□□□□□ -0.56
LINC00649-210ENST00000599421 CNMDO75829 334 aa11.54□□□□□ -0.56
LINC00649-210ENST00000599421 FOSL2P15408 326 aa11.54□□□□□ -0.56
LINC00649-210ENST00000599421 PLCG2P16885 1265 aa11.54□□□□□ -0.56
LINC00649-210ENST00000599421 PTPREP23469 700 aa11.54□□□□□ -0.56
LINC00649-210ENST00000599421 CNGA1P29973 690 aa11.54□□□□□ -0.56
LINC00649-210ENST00000599421 ATP2B2Q01814 1243 aa11.54□□□□□ -0.56
LINC00649-210ENST00000599421 GRB14Q14449 540 aa11.54□□□□□ -0.56
LINC00649-210ENST00000599421 TNNI3KQ59H18 835 aa11.54□□□□□ -0.56
LINC00649-210ENST00000599421 GORABQ5T7V8 394 aa11.54□□□□□ -0.56
LINC00649-210ENST00000599421 CRACR2BQ8N4Y2 399 aaPredicted RBP11.54□□□□□ -0.56
LINC00649-210ENST00000599421 C12orf42Q96LP6 360 aa11.54□□□□□ -0.56
LINC00649-210ENST00000599421 TRIM34Q9BYJ4 488 aa11.54□□□□□ -0.56
LINC00649-210ENST00000599421 DCTPP1Q9H773 170 aa11.54□□□□□ -0.56
LINC00649-210ENST00000599421 PIH1D3Q9NQM4 214 aaKnown RBP11.54□□□□□ -0.56
LINC00649-210ENST00000599421 FPGT-TNNI3KV9GXZ4 949 aa11.54□□□□□ -0.56
LINC00649-210ENST00000599421 FLT1P17948 1338 aa11.54□□□□□ -0.56
LINC00649-210ENST00000599421 BDP1A6H8Y1 2624 aa11.54□□□□□ -0.56
LINC00649-210ENST00000599421 PARP14Q460N5 1801 aa11.53□□□□□ -0.56
LINC00649-210ENST00000599421 MYH7P12883 1935 aa11.53□□□□□ -0.56
LINC00649-210ENST00000599421 TMEM265A0A087WTH1 108 aa11.53□□□□□ -0.56
LINC00649-210ENST00000599421 USP17L15C9J2P7 530 aa11.53□□□□□ -0.56
LINC00649-210ENST00000599421 USP17L13C9JLJ4 530 aa11.53□□□□□ -0.56
LINC00649-210ENST00000599421 USP17L11C9JVI0 530 aa11.53□□□□□ -0.56
LINC00649-210ENST00000599421 USP17L18D6R9N7 530 aa11.53□□□□□ -0.56
LINC00649-210ENST00000599421 USP17L22D6RA61 530 aa11.53□□□□□ -0.56
LINC00649-210ENST00000599421 USP17L17D6RBQ6 530 aa11.53□□□□□ -0.56
LINC00649-210ENST00000599421 USP17L19D6RCP7 530 aa11.53□□□□□ -0.56
LINC00649-210ENST00000599421 USP17L20D6RJB6 530 aa11.53□□□□□ -0.56
LINC00649-210ENST00000599421 BAG3O95817 575 aa11.53□□□□□ -0.56
LINC00649-210ENST00000599421 IGHA2P01877 340 aa11.53□□□□□ -0.56
LINC00649-210ENST00000599421 CYP2E1P05181 493 aaPredicted RBP11.53□□□□□ -0.56
LINC00649-210ENST00000599421 CYBAP13498 195 aa11.53□□□□□ -0.56
LINC00649-210ENST00000599421 CYP2C19P33261 490 aa11.53□□□□□ -0.56
LINC00649-210ENST00000599421 PPP4CP60510 307 aa11.53□□□□□ -0.56
LINC00649-210ENST00000599421 USP17L24Q0WX57 530 aa11.53□□□□□ -0.56
LINC00649-210ENST00000599421 POLA2Q14181 598 aa11.53□□□□□ -0.56
LINC00649-210ENST00000599421 SNX17Q15036 470 aa11.53□□□□□ -0.56
LINC00649-210ENST00000599421 WDR78Q5VTH9 848 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms