RNA–Protein interactions for RNA: ENST00000599339.1

EBI3-202, Transcript of Epstein-Barr virus induced 3, humanhuman

TSL 2

Gene EBI3, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBI3-202ENST00000599339 IFIT2P09913 472 aaKnown RBP17.72■□□□□ 0.43
EBI3-202ENST00000599339 ZKSCAN1P17029 563 aaPredicted RBP17.72■□□□□ 0.43
EBI3-202ENST00000599339 RGS2P41220 211 aa17.72■□□□□ 0.43
EBI3-202ENST00000599339 USP17L24Q0WX57 530 aa17.72■□□□□ 0.43
EBI3-202ENST00000599339 SLC9C2Q5TAH2 1124 aa17.72■□□□□ 0.43
EBI3-202ENST00000599339 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.72■□□□□ 0.43
EBI3-202ENST00000599339 TRIB2Q92519 343 aa17.72■□□□□ 0.43
EBI3-202ENST00000599339 RIOK1Q9BRS2 568 aaKnown RBP17.72■□□□□ 0.43
EBI3-202ENST00000599339 GLRX3O76003 335 aaKnown RBP17.71■□□□□ 0.43
EBI3-202ENST00000599339 PDE6AP16499 860 aa17.71■□□□□ 0.43
EBI3-202ENST00000599339 ZYXQ15942 572 aaKnown RBP17.71■□□□□ 0.43
EBI3-202ENST00000599339 GPR142Q7Z601 462 aa17.71■□□□□ 0.43
EBI3-202ENST00000599339 PLEKHH3Q7Z736 793 aa17.71■□□□□ 0.43
EBI3-202ENST00000599339 NBPF3Q9H094 633 aa17.71■□□□□ 0.43
EBI3-202ENST00000599339 KIAA1683Q9H0B3 1180 aa17.71■□□□□ 0.43
EBI3-202ENST00000599339 RABGAP1Q9Y3P9 1069 aa17.71■□□□□ 0.43
EBI3-202ENST00000599339 PLXNB2O15031 1838 aa17.7■□□□□ 0.42
EBI3-202ENST00000599339 APBB1O00213 710 aa17.7■□□□□ 0.42
EBI3-202ENST00000599339 PRKAR2AP13861 404 aaKnown RBP17.7■□□□□ 0.42
EBI3-202ENST00000599339 TRIM32Q13049 653 aa17.7■□□□□ 0.42
EBI3-202ENST00000599339 DNAJC2Q99543 621 aaKnown RBP17.7■□□□□ 0.42
EBI3-202ENST00000599339 A0A1W2PPC1 479 aa17.69■□□□□ 0.42
EBI3-202ENST00000599339 GOLIM4O00461 696 aa17.69■□□□□ 0.42
EBI3-202ENST00000599339 PEX10O60683 326 aa17.69■□□□□ 0.42
EBI3-202ENST00000599339 RAB11FIP3O75154 756 aa17.69■□□□□ 0.42
EBI3-202ENST00000599339 VCAM1P19320 739 aa17.69■□□□□ 0.42
EBI3-202ENST00000599339 SHMT1P34896 483 aa17.69■□□□□ 0.42
EBI3-202ENST00000599339 PLCD1P51178 756 aa17.69■□□□□ 0.42
EBI3-202ENST00000599339 Q3C1V9 767 aa17.69■□□□□ 0.42
EBI3-202ENST00000599339 MAP3K21Q5TCX8 1036 aa17.69■□□□□ 0.42
EBI3-202ENST00000599339 CATSPERGQ6ZRH7 1159 aa17.69■□□□□ 0.42
EBI3-202ENST00000599339 DIS3LQ8TF46 1054 aaKnown RBP17.69■□□□□ 0.42
EBI3-202ENST00000599339 APBA2Q99767 749 aa17.69■□□□□ 0.42
EBI3-202ENST00000599339 PORCNQ9H237 461 aa17.69■□□□□ 0.42
EBI3-202ENST00000599339 MCM9Q9NXL9 1143 aa17.69■□□□□ 0.42
EBI3-202ENST00000599339 OGDHLQ9ULD0 1010 aa17.69■□□□□ 0.42
EBI3-202ENST00000599339 NAV1Q8NEY1 1877 aa17.69■□□□□ 0.42
EBI3-202ENST00000599339 ZNF532Q9HCE3 1301 aa17.69■□□□□ 0.42
EBI3-202ENST00000599339 MORN1Q5T089 497 aa17.68■□□□□ 0.42
EBI3-202ENST00000599339 USP6NLQ92738 828 aa17.68■□□□□ 0.42
EBI3-202ENST00000599339 PRO3102Q9H379 93 aa17.68■□□□□ 0.42
EBI3-202ENST00000599339 C11orf49Q9H6J7 331 aa17.68■□□□□ 0.42
EBI3-202ENST00000599339 DDX60LQ5H9U9 1706 aaKnown RBP17.67■□□□□ 0.42
EBI3-202ENST00000599339 MPHOSPH10O00566 681 aaKnown RBP17.67■□□□□ 0.42
EBI3-202ENST00000599339 GABPAQ06546 454 aa17.67■□□□□ 0.42
EBI3-202ENST00000599339 WDR78Q5VTH9 848 aa17.67■□□□□ 0.42
EBI3-202ENST00000599339 LBX2Q6XYB7 198 aa17.67■□□□□ 0.42
EBI3-202ENST00000599339 ACER1Q8TDN7 264 aa17.67■□□□□ 0.42
EBI3-202ENST00000599339 BCL11AQ9H165 835 aa17.67■□□□□ 0.42
EBI3-202ENST00000599339 ZBTB40Q9NUA8 1239 aa17.67■□□□□ 0.42
EBI3-202ENST00000599339 COG6Q9Y2V7 657 aa17.67■□□□□ 0.42
EBI3-202ENST00000599339 IVNS1ABPQ9Y6Y0 642 aa17.67■□□□□ 0.42
EBI3-202ENST00000599339 CACNB2Q08289 660 aaPredicted RBP17.66■□□□□ 0.42
EBI3-202ENST00000599339 MAP2K5Q13163 448 aa17.66■□□□□ 0.42
EBI3-202ENST00000599339 EDC3Q96F86 508 aaKnown RBP17.66■□□□□ 0.42
EBI3-202ENST00000599339 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.66■□□□□ 0.42
EBI3-202ENST00000599339 DCP1AQ9NPI6 582 aaPredicted RBP17.66■□□□□ 0.42
EBI3-202ENST00000599339 PAG1Q9NWQ8 432 aa17.66■□□□□ 0.42
EBI3-202ENST00000599339 SWAP70Q9UH65 585 aa17.66■□□□□ 0.42
EBI3-202ENST00000599339 SLC15A5A6NIM6 579 aa17.65■□□□□ 0.42
EBI3-202ENST00000599339 SEPT2Q15019 361 aa17.65■□□□□ 0.42
EBI3-202ENST00000599339 AMOTL1Q8IY63 956 aa17.65■□□□□ 0.42
EBI3-202ENST00000599339 C7orf61Q8IZ16 206 aa17.65■□□□□ 0.42
EBI3-202ENST00000599339 SDR42E1Q8WUS8 393 aa17.65■□□□□ 0.42
EBI3-202ENST00000599339 RPAP3Q9H6T3 665 aaPredicted RBP17.65■□□□□ 0.42
EBI3-202ENST00000599339 RANBP2P49792 3224 aaKnown RBP17.64■□□□□ 0.42
EBI3-202ENST00000599339 TCRBV5S4A2TA0A5A2 114 aa17.64■□□□□ 0.41
EBI3-202ENST00000599339 SPDYE16A6NNV3 312 aaPredicted RBP17.64■□□□□ 0.41
EBI3-202ENST00000599339 CNMDO75829 334 aa17.64■□□□□ 0.41
EBI3-202ENST00000599339 PTPREP23469 700 aa17.64■□□□□ 0.41
EBI3-202ENST00000599339 GUCY1A2P33402 732 aa17.64■□□□□ 0.41
EBI3-202ENST00000599339 CCL14Q16627 93 aa17.64■□□□□ 0.41
EBI3-202ENST00000599339 MFSD14CQ5VZR4 134 aa17.64■□□□□ 0.41
EBI3-202ENST00000599339 POTEEQ6S8J3 1075 aa17.64■□□□□ 0.41
EBI3-202ENST00000599339 TMEM179Q6ZVK1 233 aa17.64■□□□□ 0.41
EBI3-202ENST00000599339 SIRT2Q8IXJ6 389 aa17.64■□□□□ 0.41
EBI3-202ENST00000599339 LCORLQ8N3X6 602 aa17.64■□□□□ 0.41
EBI3-202ENST00000599339 DDRGK1Q96HY6 314 aa17.64■□□□□ 0.41
EBI3-202ENST00000599339 ATP8A2Q9NTI2 1148 aa17.64■□□□□ 0.41
EBI3-202ENST00000599339 HOXC10Q9NYD6 342 aa17.64■□□□□ 0.41
EBI3-202ENST00000599339 ALPK3Q96L96 1907 aa17.63■□□□□ 0.41
EBI3-202ENST00000599339 ATP5JP18859 108 aa17.63■□□□□ 0.41
EBI3-202ENST00000599339 MNX1P50219 401 aaPredicted RBP17.63■□□□□ 0.41
EBI3-202ENST00000599339 BOLA2Q9H3K6 86 aa17.63■□□□□ 0.41
EBI3-202ENST00000599339 SH2D4AQ9H788 454 aa17.63■□□□□ 0.41
EBI3-202ENST00000599339 ARMT1Q9H993 441 aa17.63■□□□□ 0.41
EBI3-202ENST00000599339 STAP2Q9UGK3 403 aa17.63■□□□□ 0.41
EBI3-202ENST00000599339 MBD4O95243 580 aa17.62■□□□□ 0.41
EBI3-202ENST00000599339 CCND3P30281 292 aaPredicted RBP17.62■□□□□ 0.41
EBI3-202ENST00000599339 ADD2P35612 726 aa17.62■□□□□ 0.41
EBI3-202ENST00000599339 ATP2B2Q01814 1243 aa17.62■□□□□ 0.41
EBI3-202ENST00000599339 COG2Q14746 738 aa17.62■□□□□ 0.41
EBI3-202ENST00000599339 ZSCAN25Q6NSZ9 544 aa17.62■□□□□ 0.41
EBI3-202ENST00000599339 TANGO6Q9C0B7 1094 aa17.62■□□□□ 0.41
EBI3-202ENST00000599339 ARHGEF10LQ9HCE6 1279 aa17.62■□□□□ 0.41
EBI3-202ENST00000599339 BTBD7Q9P203 1132 aa17.62■□□□□ 0.41
EBI3-202ENST00000599339 RCAN3Q9UKA8 241 aa17.62■□□□□ 0.41
EBI3-202ENST00000599339 ZMYND8Q9ULU4 1186 aaPredicted RBP17.62■□□□□ 0.41
EBI3-202ENST00000599339 MSCO60682 206 aa17.61■□□□□ 0.41
EBI3-202ENST00000599339 HOXC6P09630 235 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms