RNA–Protein interactions for RNA: ENST00000598478.1

LINC00343-206, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 618 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-206ENST00000598478 PHACTR3Q96KR7 559 aa10.04□□□□□ -0.8
LINC00343-206ENST00000598478 LRRC37AA6NMS7 1700 aa10.04□□□□□ -0.8
LINC00343-206ENST00000598478 DCDC2BA2VCK2 349 aa10.03□□□□□ -0.8
LINC00343-206ENST00000598478 WTIPA6NIX2 430 aaPredicted RBP10.03□□□□□ -0.8
LINC00343-206ENST00000598478 A6NJY4 79 aa10.03□□□□□ -0.8
LINC00343-206ENST00000598478 K7ELQ4 463 aaPredicted RBP10.03□□□□□ -0.8
LINC00343-206ENST00000598478 PIK3R2O00459 728 aa10.03□□□□□ -0.8
LINC00343-206ENST00000598478 GNB5O14775 395 aa10.03□□□□□ -0.8
LINC00343-206ENST00000598478 ZNF609O15014 1411 aa10.03□□□□□ -0.8
LINC00343-206ENST00000598478 U2SURPO15042 1029 aaKnown RBP10.03□□□□□ -0.8
LINC00343-206ENST00000598478 MAPTP10636 758 aaKnown RBP10.03□□□□□ -0.8
LINC00343-206ENST00000598478 TNP2Q05952 138 aa10.03□□□□□ -0.8
LINC00343-206ENST00000598478 PRKG1Q13976 671 aa10.03□□□□□ -0.8
LINC00343-206ENST00000598478 SLC4A8Q2Y0W8 1093 aa10.03□□□□□ -0.8
LINC00343-206ENST00000598478 SLC10A5Q5PT55 438 aa10.03□□□□□ -0.8
LINC00343-206ENST00000598478 PPP1R42Q7Z4L9 355 aa10.03□□□□□ -0.8
LINC00343-206ENST00000598478 DDX60Q8IY21 1712 aaKnown RBP10.03□□□□□ -0.8
LINC00343-206ENST00000598478 DPF3Q92784 378 aa10.03□□□□□ -0.8
LINC00343-206ENST00000598478 PRO3102Q9H379 93 aa10.03□□□□□ -0.8
LINC00343-206ENST00000598478 EFCC1Q9HA90 598 aa10.03□□□□□ -0.8
LINC00343-206ENST00000598478 MIS18AQ9NYP9 233 aa10.03□□□□□ -0.8
LINC00343-206ENST00000598478 POLLQ9UGP5 575 aa10.03□□□□□ -0.8
LINC00343-206ENST00000598478 HCN2Q9UL51 889 aa10.03□□□□□ -0.8
LINC00343-206ENST00000598478 IQSEC3Q9UPP2 1182 aaPredicted RBP10.03□□□□□ -0.8
LINC00343-206ENST00000598478 USP3Q9Y6I4 520 aa10.03□□□□□ -0.8
LINC00343-206ENST00000598478 COL4A1P02462 1669 aa10.02□□□□□ -0.8
LINC00343-206ENST00000598478 IGF2BP3O00425 579 aaKnown RBP eCLIP10.02□□□□□ -0.81
LINC00343-206ENST00000598478 CDK2AP1O14519 115 aa10.02□□□□□ -0.81
LINC00343-206ENST00000598478 VIL1P09327 827 aaKnown RBP10.02□□□□□ -0.81
LINC00343-206ENST00000598478 CD33P20138 364 aa10.02□□□□□ -0.81
LINC00343-206ENST00000598478 DGKGP49619 791 aa10.02□□□□□ -0.81
LINC00343-206ENST00000598478 ZNF280AP59817 542 aaPredicted RBP10.02□□□□□ -0.81
LINC00343-206ENST00000598478 GRAPQ13588 217 aa10.02□□□□□ -0.81
LINC00343-206ENST00000598478 DCTN1Q14203 1278 aa10.02□□□□□ -0.81
LINC00343-206ENST00000598478 MTFR1Q15390 333 aa10.02□□□□□ -0.81
LINC00343-206ENST00000598478 DDX46Q7L014 1031 aaKnown RBP10.02□□□□□ -0.81
LINC00343-206ENST00000598478 GRAPLQ8TC17 118 aaPredicted RBP10.02□□□□□ -0.81
LINC00343-206ENST00000598478 ZNF428Q96B54 188 aa10.02□□□□□ -0.81
LINC00343-206ENST00000598478 ERO1AQ96HE7 468 aa10.02□□□□□ -0.81
LINC00343-206ENST00000598478 UTP14AQ9BVJ6 771 aaKnown RBP10.02□□□□□ -0.81
LINC00343-206ENST00000598478 ZDHHC3Q9NYG2 299 aa10.02□□□□□ -0.81
LINC00343-206ENST00000598478 FZD1Q9UP38 647 aa10.02□□□□□ -0.81
LINC00343-206ENST00000598478 MUC3AQ02505 3323 aa10.02□□□□□ -0.81
LINC00343-206ENST00000598478 PIK3CDO00329 1044 aa10.01□□□□□ -0.81
LINC00343-206ENST00000598478 KHNYNO15037 678 aaKnown RBP10.01□□□□□ -0.81
LINC00343-206ENST00000598478 ADH6P28332 368 aa10.01□□□□□ -0.81
LINC00343-206ENST00000598478 GPSM2P81274 684 aa10.01□□□□□ -0.81
LINC00343-206ENST00000598478 TCIRG1Q13488 830 aa10.01□□□□□ -0.81
LINC00343-206ENST00000598478 SLC9C1Q4G0N8 1177 aa10.01□□□□□ -0.81
LINC00343-206ENST00000598478 MYOZ2Q9NPC6 264 aa10.01□□□□□ -0.81
LINC00343-206ENST00000598478 PCDHGA11Q9Y5H2 935 aa10.01□□□□□ -0.81
LINC00343-206ENST00000598478 CRHR2Q13324 411 aa10□□□□□ -0.81
LINC00343-206ENST00000598478 MCM6Q14566 821 aa10□□□□□ -0.81
LINC00343-206ENST00000598478 NBPF9Q3BBW0 867 aa10□□□□□ -0.81
LINC00343-206ENST00000598478 PARP10Q53GL7 1025 aa10□□□□□ -0.81
LINC00343-206ENST00000598478 KLF15Q9UIH9 416 aa10□□□□□ -0.81
LINC00343-206ENST00000598478 KNSTRNQ9Y448 316 aa10□□□□□ -0.81
LINC00343-206ENST00000598478 PTCH2Q9Y6C5 1203 aa10□□□□□ -0.81
LINC00343-206ENST00000598478 COL3A1P02461 1466 aaPredicted RBP9.99□□□□□ -0.81
LINC00343-206ENST00000598478 CHSY3Q70JA7 882 aa9.99□□□□□ -0.81
LINC00343-206ENST00000598478 SH3TC2Q8TF17 1288 aa9.99□□□□□ -0.81
LINC00343-206ENST00000598478 CELF1Q92879 486 aaKnown RBP9.99□□□□□ -0.81
LINC00343-206ENST00000598478 AVENQ9NQS1 362 aaPredicted RBP9.99□□□□□ -0.81
LINC00343-206ENST00000598478 MANSC4A6NHS7 340 aaPredicted RBP9.98□□□□□ -0.81
LINC00343-206ENST00000598478 FAM157BP0CG42 384 aa9.98□□□□□ -0.81
LINC00343-206ENST00000598478 PRKAR2BP31323 418 aa9.98□□□□□ -0.81
LINC00343-206ENST00000598478 SP3Q02447 781 aa9.98□□□□□ -0.81
LINC00343-206ENST00000598478 LDLRAD1Q5T700 205 aa9.98□□□□□ -0.81
LINC00343-206ENST00000598478 XP32Q5T750 250 aa9.98□□□□□ -0.81
LINC00343-206ENST00000598478 Q7L0L9 218 aa9.98□□□□□ -0.81
LINC00343-206ENST00000598478 NBPF11Q86T75 865 aa9.98□□□□□ -0.81
LINC00343-206ENST00000598478 FCHSD1Q86WN1 690 aa9.98□□□□□ -0.81
LINC00343-206ENST00000598478 TBC1D16Q8TBP0 767 aa9.98□□□□□ -0.81
LINC00343-206ENST00000598478 CLMNQ96JQ2 1002 aa9.98□□□□□ -0.81
LINC00343-206ENST00000598478 THUMPD2Q9BTF0 503 aaKnown RBP9.98□□□□□ -0.81
LINC00343-206ENST00000598478 NOP53Q9NZM5 478 aaKnown RBP9.98□□□□□ -0.81
LINC00343-206ENST00000598478 C1QTNF9BB2RNN3 333 aa9.97□□□□□ -0.81
LINC00343-206ENST00000598478 FURINP09958 794 aa9.97□□□□□ -0.81
LINC00343-206ENST00000598478 NF2P35240 595 aa9.97□□□□□ -0.81
LINC00343-206ENST00000598478 EML3Q32P44 896 aa9.97□□□□□ -0.81
LINC00343-206ENST00000598478 ARMC9Q7Z3E5 817 aa9.97□□□□□ -0.81
LINC00343-206ENST00000598478 DEFB123Q8N688 67 aa9.97□□□□□ -0.81
LINC00343-206ENST00000598478 AGBL3Q8NEM8 1001 aa9.97□□□□□ -0.81
LINC00343-206ENST00000598478 RTF1Q92541 710 aaKnown RBP9.97□□□□□ -0.81
LINC00343-206ENST00000598478 SHISA4Q96DD7 197 aa9.97□□□□□ -0.81
LINC00343-206ENST00000598478 GMLQ99445 158 aa9.97□□□□□ -0.81
LINC00343-206ENST00000598478 EYA3Q99504 573 aa9.97□□□□□ -0.81
LINC00343-206ENST00000598478 ANGEL1Q9UNK9 670 aaKnown RBP9.97□□□□□ -0.81
LINC00343-206ENST00000598478 ZSWIM8A7E2V4 1837 aa9.97□□□□□ -0.81
LINC00343-206ENST00000598478 PSME4Q14997 1843 aa9.97□□□□□ -0.81
LINC00343-206ENST00000598478 LAMB1P07942 1786 aa9.96□□□□□ -0.81
LINC00343-206ENST00000598478 SKIP12755 728 aa9.96□□□□□ -0.82
LINC00343-206ENST00000598478 INHBEP58166 350 aa9.96□□□□□ -0.82
LINC00343-206ENST00000598478 SAMD5Q5TGI4 173 aa9.96□□□□□ -0.82
LINC00343-206ENST00000598478 TMC4Q7Z404 712 aa9.96□□□□□ -0.82
LINC00343-206ENST00000598478 CD163Q86VB7 1156 aa9.96□□□□□ -0.82
LINC00343-206ENST00000598478 WNK4Q96J92 1243 aa9.96□□□□□ -0.82
LINC00343-206ENST00000598478 PTPN18Q99952 460 aa9.96□□□□□ -0.82
LINC00343-206ENST00000598478 MXD3Q9BW11 206 aa9.96□□□□□ -0.82
LINC00343-206ENST00000598478 ZC3H12CQ9C0D7 883 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms