RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 CCDC17Q96LX7 622 aa17.53■□□□□ 0.4
XRCC1-208ENST00000598422 PHIPQ8WWQ0 1821 aa17.53■□□□□ 0.4
XRCC1-208ENST00000598422 LOC285556D6RIA3 1793 aa17.53■□□□□ 0.4
XRCC1-208ENST00000598422 POTEFA5A3E0 1075 aa17.52■□□□□ 0.4
XRCC1-208ENST00000598422 APPP05067 770 aa17.52■□□□□ 0.4
XRCC1-208ENST00000598422 VCAM1P19320 739 aa17.52■□□□□ 0.4
XRCC1-208ENST00000598422 TDO2P48775 406 aa17.52■□□□□ 0.4
XRCC1-208ENST00000598422 CDK8P49336 464 aa17.52■□□□□ 0.4
XRCC1-208ENST00000598422 FLT3LGP49771 235 aa17.52■□□□□ 0.4
XRCC1-208ENST00000598422 ICA1Q05084 483 aa17.52■□□□□ 0.4
XRCC1-208ENST00000598422 GIMAP6Q6P9H5 292 aa17.52■□□□□ 0.4
XRCC1-208ENST00000598422 C16orf86Q6ZW13 317 aa17.52■□□□□ 0.4
XRCC1-208ENST00000598422 CCAR1Q8IX12 1150 aaKnown RBP17.52■□□□□ 0.4
XRCC1-208ENST00000598422 SLAIN1Q8ND83 568 aa17.52■□□□□ 0.4
XRCC1-208ENST00000598422 EXOC6Q8TAG9 804 aa17.52■□□□□ 0.4
XRCC1-208ENST00000598422 P2RX7Q99572 595 aaKnown RBP17.52■□□□□ 0.4
XRCC1-208ENST00000598422 SH2D4AQ9H788 454 aa17.52■□□□□ 0.4
XRCC1-208ENST00000598422 ATAD5Q96QE3 1844 aa17.51■□□□□ 0.39
XRCC1-208ENST00000598422 USP17L15C9J2P7 530 aa17.51■□□□□ 0.39
XRCC1-208ENST00000598422 USP17L13C9JLJ4 530 aa17.51■□□□□ 0.39
XRCC1-208ENST00000598422 USP17L11C9JVI0 530 aa17.51■□□□□ 0.39
XRCC1-208ENST00000598422 USP17L18D6R9N7 530 aa17.51■□□□□ 0.39
XRCC1-208ENST00000598422 USP17L22D6RA61 530 aa17.51■□□□□ 0.39
XRCC1-208ENST00000598422 USP17L17D6RBQ6 530 aa17.51■□□□□ 0.39
XRCC1-208ENST00000598422 USP17L19D6RCP7 530 aa17.51■□□□□ 0.39
XRCC1-208ENST00000598422 USP17L20D6RJB6 530 aa17.51■□□□□ 0.39
XRCC1-208ENST00000598422 M0R2C6 588 aa17.51■□□□□ 0.39
XRCC1-208ENST00000598422 AKR1B1P15121 316 aa17.51■□□□□ 0.39
XRCC1-208ENST00000598422 GUCY1A2P33402 732 aa17.51■□□□□ 0.39
XRCC1-208ENST00000598422 UBXN2AP68543 259 aa17.51■□□□□ 0.39
XRCC1-208ENST00000598422 USP17L24Q0WX57 530 aa17.51■□□□□ 0.39
XRCC1-208ENST00000598422 CTR9Q6PD62 1173 aa17.51■□□□□ 0.39
XRCC1-208ENST00000598422 GPRC5AQ8NFJ5 357 aa17.51■□□□□ 0.39
XRCC1-208ENST00000598422 PAGR1Q9BTK6 254 aa17.51■□□□□ 0.39
XRCC1-208ENST00000598422 NACAP1Q9BZK3 213 aa17.51■□□□□ 0.39
XRCC1-208ENST00000598422 LNPKQ9C0E8 428 aa17.51■□□□□ 0.39
XRCC1-208ENST00000598422 ARHGEF10LQ9HCE6 1279 aa17.51■□□□□ 0.39
XRCC1-208ENST00000598422 CWC22Q9HCG8 908 aaKnown RBP17.51■□□□□ 0.39
XRCC1-208ENST00000598422 MORF4L1Q9UBU8 362 aa17.51■□□□□ 0.39
XRCC1-208ENST00000598422 GABRQQ9UN88 632 aa17.51■□□□□ 0.39
XRCC1-208ENST00000598422 SUPT16HQ9Y5B9 1047 aaKnown RBP17.51■□□□□ 0.39
XRCC1-208ENST00000598422 MYH1P12882 1939 aa17.51■□□□□ 0.39
XRCC1-208ENST00000598422 SALL3Q9BXA9 1300 aa17.5■□□□□ 0.39
XRCC1-208ENST00000598422 MINDY4BA8MYZ0 360 aa17.5■□□□□ 0.39
XRCC1-208ENST00000598422 PDE1AP54750 535 aa17.5■□□□□ 0.39
XRCC1-208ENST00000598422 RPAP3Q9H6T3 665 aaPredicted RBP17.5■□□□□ 0.39
XRCC1-208ENST00000598422 PTPRFP10586 1907 aa17.5■□□□□ 0.39
XRCC1-208ENST00000598422 HTTP42858 3142 aa17.49■□□□□ 0.39
XRCC1-208ENST00000598422 GSG1L2A8MUP6 293 aa17.49■□□□□ 0.39
XRCC1-208ENST00000598422 ADCY3O60266 1144 aa17.49■□□□□ 0.39
XRCC1-208ENST00000598422 ATP2B2Q01814 1243 aa17.49■□□□□ 0.39
XRCC1-208ENST00000598422 SBK1Q52WX2 424 aa17.49■□□□□ 0.39
XRCC1-208ENST00000598422 B4GALNT3Q6L9W6 998 aa17.49■□□□□ 0.39
XRCC1-208ENST00000598422 EVI5LQ96CN4 794 aa17.49■□□□□ 0.39
XRCC1-208ENST00000598422 MKNK2Q9HBH9 465 aa17.49■□□□□ 0.39
XRCC1-208ENST00000598422 STAP2Q9UGK3 403 aa17.49■□□□□ 0.39
XRCC1-208ENST00000598422 ZSWIM8A7E2V4 1837 aa17.49■□□□□ 0.39
XRCC1-208ENST00000598422 SMIM22K7EJ46 135 aa17.48■□□□□ 0.39
XRCC1-208ENST00000598422 EN2P19622 333 aaPredicted RBP17.48■□□□□ 0.39
XRCC1-208ENST00000598422 ERVK-9P63128 1117 aa17.48■□□□□ 0.39
XRCC1-208ENST00000598422 ERVK-24P63145 666 aa17.48■□□□□ 0.39
XRCC1-208ENST00000598422 IRF5Q13568 498 aa17.48■□□□□ 0.39
XRCC1-208ENST00000598422 ZMYM1Q5SVZ6 1142 aa17.48■□□□□ 0.39
XRCC1-208ENST00000598422 CLEC10AQ8IUN9 316 aa17.48■□□□□ 0.39
XRCC1-208ENST00000598422 SMC5Q8IY18 1101 aa17.48■□□□□ 0.39
XRCC1-208ENST00000598422 STK11IPQ8N1F8 1099 aa17.48■□□□□ 0.39
XRCC1-208ENST00000598422 TANGO6Q9C0B7 1094 aa17.48■□□□□ 0.39
XRCC1-208ENST00000598422 ZNF287Q9HBT7 754 aa17.48■□□□□ 0.39
XRCC1-208ENST00000598422 TXNRD2Q9NNW7 524 aa17.48■□□□□ 0.39
XRCC1-208ENST00000598422 A0A1W2PRG0 241 aa17.47■□□□□ 0.39
XRCC1-208ENST00000598422 ELNP15502 786 aa17.47■□□□□ 0.39
XRCC1-208ENST00000598422 MAPK4P31152 587 aa17.47■□□□□ 0.39
XRCC1-208ENST00000598422 CCNA1P78396 465 aa17.47■□□□□ 0.39
XRCC1-208ENST00000598422 MTFR1Q15390 333 aa17.47■□□□□ 0.39
XRCC1-208ENST00000598422 CATSPERGQ6ZRH7 1159 aa17.47■□□□□ 0.39
XRCC1-208ENST00000598422 PXYLP1Q8TE99 480 aa17.47■□□□□ 0.39
XRCC1-208ENST00000598422 SOCS4Q8WXH5 440 aa17.47■□□□□ 0.39
XRCC1-208ENST00000598422 LPAR1Q92633 364 aa17.47■□□□□ 0.39
XRCC1-208ENST00000598422 SEC62Q99442 399 aaKnown RBP17.47■□□□□ 0.39
XRCC1-208ENST00000598422 NAPBQ9H115 298 aa17.47■□□□□ 0.39
XRCC1-208ENST00000598422 KANSL2Q9H9L4 492 aa17.47■□□□□ 0.39
XRCC1-208ENST00000598422 EPB41L4AQ9HCS5 686 aaPredicted RBP17.47■□□□□ 0.39
XRCC1-208ENST00000598422 RABGAP1Q9Y3P9 1069 aa17.47■□□□□ 0.39
XRCC1-208ENST00000598422 ROBO3Q96MS0 1386 aa17.46■□□□□ 0.39
XRCC1-208ENST00000598422 PATL2C9JE40 543 aaKnown RBP17.46■□□□□ 0.39
XRCC1-208ENST00000598422 INHAP05111 366 aa17.46■□□□□ 0.39
XRCC1-208ENST00000598422 SLC3A2P08195 630 aaKnown RBP17.46■□□□□ 0.39
XRCC1-208ENST00000598422 CCL5P13501 91 aa17.46■□□□□ 0.39
XRCC1-208ENST00000598422 CHD1LQ86WJ1 897 aa17.46■□□□□ 0.39
XRCC1-208ENST00000598422 RNF208Q9H0X6 261 aa17.46■□□□□ 0.39
XRCC1-208ENST00000598422 RBPJLQ9UBG7 517 aa17.46■□□□□ 0.39
XRCC1-208ENST00000598422 TMX2Q9Y320 296 aa17.46■□□□□ 0.39
XRCC1-208ENST00000598422 TRIM6-TRIM34B2RNG4 842 aa17.45■□□□□ 0.38
XRCC1-208ENST00000598422 RAD21O60216 631 aa17.45■□□□□ 0.38
XRCC1-208ENST00000598422 PEX10O60683 326 aa17.45■□□□□ 0.38
XRCC1-208ENST00000598422 WDR78Q5VTH9 848 aa17.45■□□□□ 0.38
XRCC1-208ENST00000598422 IFNL3Q8IZI9 196 aa17.45■□□□□ 0.38
XRCC1-208ENST00000598422 SPICE1Q8N0Z3 855 aa17.45■□□□□ 0.38
XRCC1-208ENST00000598422 NKX2-3Q8TAU0 364 aa17.45■□□□□ 0.38
XRCC1-208ENST00000598422 NUDT12Q9BQG2 462 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms