RNA–Protein interactions for RNA: ENST00000598329.2

SYMPK-210, Transcript of symplekin, humanhuman

TSL 3

Gene SYMPK, Length 1,000 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-210ENST00000598329 CAP1Q01518 475 aa14.97□□□□□ -0.01
SYMPK-210ENST00000598329 PABPC4Q13310 644 aaKnown RBP eCLIP14.97□□□□□ -0.01
SYMPK-210ENST00000598329 VPS53Q5VIR6 699 aa14.97□□□□□ -0.01
SYMPK-210ENST00000598329 ERICH6BQ5W0A0 696 aa14.97□□□□□ -0.01
SYMPK-210ENST00000598329 USP17L2Q6R6M4 530 aa14.97□□□□□ -0.01
SYMPK-210ENST00000598329 GADL1Q6ZQY3 521 aa14.97□□□□□ -0.01
SYMPK-210ENST00000598329 CCDC129Q6ZRS4 1044 aa14.97□□□□□ -0.01
SYMPK-210ENST00000598329 ZNF589Q86UQ0 364 aaPredicted RBP14.97□□□□□ -0.01
SYMPK-210ENST00000598329 ACER1Q8TDN7 264 aa14.97□□□□□ -0.01
SYMPK-210ENST00000598329 MCOLN1Q9GZU1 580 aa14.97□□□□□ -0.01
SYMPK-210ENST00000598329 NAPBQ9H115 298 aa14.97□□□□□ -0.01
SYMPK-210ENST00000598329 ZNF287Q9HBT7 754 aa14.97□□□□□ -0.01
SYMPK-210ENST00000598329 PNMA3Q9UL41 463 aa14.97□□□□□ -0.01
SYMPK-210ENST00000598329 CCDC171Q6TFL3 1326 aa14.96□□□□□ -0.01
SYMPK-210ENST00000598329 IGKV6D-41A0A0C4DH26 115 aa14.96□□□□□ -0.01
SYMPK-210ENST00000598329 A0A1W2PRG0 241 aa14.96□□□□□ -0.01
SYMPK-210ENST00000598329 GNRH1P01148 92 aa14.96□□□□□ -0.01
SYMPK-210ENST00000598329 FGAP02671 866 aa14.96□□□□□ -0.01
SYMPK-210ENST00000598329 CYP2C8P10632 490 aa14.96□□□□□ -0.01
SYMPK-210ENST00000598329 MFAP1P55081 439 aaKnown RBP14.96□□□□□ -0.01
SYMPK-210ENST00000598329 PPARAQ07869 468 aa14.96□□□□□ -0.01
SYMPK-210ENST00000598329 RAB3GAP1Q15042 981 aa14.96□□□□□ -0.01
SYMPK-210ENST00000598329 KANSL2Q9H9L4 492 aa14.96□□□□□ -0.01
SYMPK-210ENST00000598329 TMOD4Q9NZQ9 345 aa14.96□□□□□ -0.01
SYMPK-210ENST00000598329 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.96□□□□□ -0.01
SYMPK-210ENST00000598329 TMX2Q9Y320 296 aa14.96□□□□□ -0.01
SYMPK-210ENST00000598329 MINDY4BA8MYZ0 360 aa14.95□□□□□ -0.02
SYMPK-210ENST00000598329 GCLCP48506 637 aaPredicted RBP14.95□□□□□ -0.02
SYMPK-210ENST00000598329 LACTBP83111 547 aaPredicted RBP14.95□□□□□ -0.02
SYMPK-210ENST00000598329 DGKZQ13574 1117 aa14.95□□□□□ -0.02
SYMPK-210ENST00000598329 LBX2Q6XYB7 198 aa14.95□□□□□ -0.02
SYMPK-210ENST00000598329 OTOP1Q7RTM1 612 aa14.95□□□□□ -0.02
SYMPK-210ENST00000598329 ASCC2Q9H1I8 757 aaPredicted RBP14.95□□□□□ -0.02
SYMPK-210ENST00000598329 SYNPO2Q9UMS6 1093 aa14.95□□□□□ -0.02
SYMPK-210ENST00000598329 PLIN4Q96Q06 1357 aa14.95□□□□□ -0.02
SYMPK-210ENST00000598329 ARHGEF6Q15052 776 aa14.94□□□□□ -0.02
SYMPK-210ENST00000598329 CD99L2Q8TCZ2 262 aa14.94□□□□□ -0.02
SYMPK-210ENST00000598329 MKL1Q969V6 931 aa14.94□□□□□ -0.02
SYMPK-210ENST00000598329 NYAP2Q9P242 653 aa14.94□□□□□ -0.02
SYMPK-210ENST00000598329 MORF4L1Q9UBU8 362 aa14.94□□□□□ -0.02
SYMPK-210ENST00000598329 CPA4Q9UI42 421 aa14.94□□□□□ -0.02
SYMPK-210ENST00000598329 GREB1LQ9C091 1923 aaPredicted RBP14.94□□□□□ -0.02
SYMPK-210ENST00000598329 MPHOSPH10O00566 681 aaKnown RBP14.93□□□□□ -0.02
SYMPK-210ENST00000598329 ORC4O43929 436 aa14.93□□□□□ -0.02
SYMPK-210ENST00000598329 SLC3A2P08195 630 aaKnown RBP14.93□□□□□ -0.02
SYMPK-210ENST00000598329 VCAM1P19320 739 aa14.93□□□□□ -0.02
SYMPK-210ENST00000598329 OSBPP22059 807 aa14.93□□□□□ -0.02
SYMPK-210ENST00000598329 CHMLP26374 656 aa14.93□□□□□ -0.02
SYMPK-210ENST00000598329 NOVP48745 357 aa14.93□□□□□ -0.02
SYMPK-210ENST00000598329 NT5C2P49902 561 aa14.93□□□□□ -0.02
SYMPK-210ENST00000598329 ICA1Q05084 483 aa14.93□□□□□ -0.02
SYMPK-210ENST00000598329 PDE4BQ07343 736 aa14.93□□□□□ -0.02
SYMPK-210ENST00000598329 FAM110CQ1W6H9 321 aa14.93□□□□□ -0.02
SYMPK-210ENST00000598329 FBXO46Q6PJ61 603 aaPredicted RBP14.93□□□□□ -0.02
SYMPK-210ENST00000598329 POTEEQ6S8J3 1075 aa14.93□□□□□ -0.02
SYMPK-210ENST00000598329 CATSPERGQ6ZRH7 1159 aa14.93□□□□□ -0.02
SYMPK-210ENST00000598329 NEDD1Q8NHV4 660 aa14.93□□□□□ -0.02
SYMPK-210ENST00000598329 GTF3C2Q8WUA4 911 aaPredicted RBP14.93□□□□□ -0.02
SYMPK-210ENST00000598329 LPAR1Q92633 364 aa14.93□□□□□ -0.02
SYMPK-210ENST00000598329 ABHD8Q96I13 439 aa14.93□□□□□ -0.02
SYMPK-210ENST00000598329 DSCC1Q9BVC3 393 aa14.93□□□□□ -0.02
SYMPK-210ENST00000598329 MKNK2Q9HBH9 465 aa14.93□□□□□ -0.02
SYMPK-210ENST00000598329 DIAPH3Q9NSV4 1193 aa14.93□□□□□ -0.02
SYMPK-210ENST00000598329 TACC3Q9Y6A5 838 aa14.93□□□□□ -0.02
SYMPK-210ENST00000598329 RAD50Q92878 1312 aa14.92□□□□□ -0.02
SYMPK-210ENST00000598329 USP17L15C9J2P7 530 aa14.92□□□□□ -0.02
SYMPK-210ENST00000598329 USP17L13C9JLJ4 530 aa14.92□□□□□ -0.02
SYMPK-210ENST00000598329 USP17L11C9JVI0 530 aa14.92□□□□□ -0.02
SYMPK-210ENST00000598329 USP17L18D6R9N7 530 aa14.92□□□□□ -0.02
SYMPK-210ENST00000598329 USP17L22D6RA61 530 aa14.92□□□□□ -0.02
SYMPK-210ENST00000598329 USP17L17D6RBQ6 530 aa14.92□□□□□ -0.02
SYMPK-210ENST00000598329 USP17L19D6RCP7 530 aa14.92□□□□□ -0.02
SYMPK-210ENST00000598329 USP17L20D6RJB6 530 aa14.92□□□□□ -0.02
SYMPK-210ENST00000598329 CENPBP07199 599 aaPredicted RBP14.92□□□□□ -0.02
SYMPK-210ENST00000598329 PCP11498 1178 aaKnown RBP14.92□□□□□ -0.02
SYMPK-210ENST00000598329 CTGFP29279 349 aa14.92□□□□□ -0.02
SYMPK-210ENST00000598329 USP17L24Q0WX57 530 aa14.92□□□□□ -0.02
SYMPK-210ENST00000598329 CWC27Q6UX04 472 aaKnown RBP14.92□□□□□ -0.02
SYMPK-210ENST00000598329 ZNF444Q8N0Y2 327 aaPredicted RBP14.92□□□□□ -0.02
SYMPK-210ENST00000598329 P2RX7Q99572 595 aaKnown RBP14.92□□□□□ -0.02
SYMPK-210ENST00000598329 IL25Q9H293 177 aa14.92□□□□□ -0.02
SYMPK-210ENST00000598329 SH2D4AQ9H788 454 aa14.92□□□□□ -0.02
SYMPK-210ENST00000598329 EFCC1Q9HA90 598 aa14.92□□□□□ -0.02
SYMPK-210ENST00000598329 ARHGEF10LQ9HCE6 1279 aa14.92□□□□□ -0.02
SYMPK-210ENST00000598329 PTPN22Q9Y2R2 807 aa14.92□□□□□ -0.02
SYMPK-210ENST00000598329 EEF2P13639 858 aaKnown RBP14.91□□□□□ -0.02
SYMPK-210ENST00000598329 PRMT2P55345 433 aa14.91□□□□□ -0.02
SYMPK-210ENST00000598329 HERVK_113P62684 666 aa14.91□□□□□ -0.02
SYMPK-210ENST00000598329 KIAA1755Q5JYT7 1200 aa14.91□□□□□ -0.02
SYMPK-210ENST00000598329 SMCR8Q8TEV9 937 aaPredicted RBP14.91□□□□□ -0.02
SYMPK-210ENST00000598329 TRIM47Q96LD4 638 aa14.91□□□□□ -0.02
SYMPK-210ENST00000598329 FEZ1Q99689 392 aa14.91□□□□□ -0.02
SYMPK-210ENST00000598329 VCPKMTQ9H867 229 aa14.91□□□□□ -0.02
SYMPK-210ENST00000598329 MTMR4Q9NYA4 1195 aa14.91□□□□□ -0.02
SYMPK-210ENST00000598329 TRIM17Q9Y577 477 aa14.91□□□□□ -0.02
SYMPK-210ENST00000598329 CENPFP49454 3210 aa14.91□□□□□ -0.02
SYMPK-210ENST00000598329 IRX3P78415 501 aaPredicted RBP14.9□□□□□ -0.02
SYMPK-210ENST00000598329 KIF22Q14807 665 aa14.9□□□□□ -0.02
SYMPK-210ENST00000598329 BMP2KLQ5H9B9 411 aa14.9□□□□□ -0.02
SYMPK-210ENST00000598329 CCDC136Q96JN2 1154 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms