RNA–Protein interactions for RNA: ENST00000598309.1

USHBP1-208, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-208ENST00000598309 ZSWIM8A7E2V4 1837 aa19.97■□□□□ 0.79
USHBP1-208ENST00000598309 CYP2D7A0A087X1C5 515 aa19.97■□□□□ 0.79
USHBP1-208ENST00000598309 FMNL1O95466 1100 aaPredicted RBP19.97■□□□□ 0.79
USHBP1-208ENST00000598309 CDK8P49336 464 aa19.97■□□□□ 0.79
USHBP1-208ENST00000598309 SOX10P56693 466 aa19.97■□□□□ 0.79
USHBP1-208ENST00000598309 NUCB1Q02818 461 aa19.97■□□□□ 0.79
USHBP1-208ENST00000598309 SEPT2Q15019 361 aa19.97■□□□□ 0.79
USHBP1-208ENST00000598309 ANKRD13CQ8N6S4 541 aa19.97■□□□□ 0.79
USHBP1-208ENST00000598309 EMILIN3Q9NT22 766 aa19.97■□□□□ 0.79
USHBP1-208ENST00000598309 SRRDQ9UH36 339 aa19.97■□□□□ 0.79
USHBP1-208ENST00000598309 ROBO3Q96MS0 1386 aa19.96■□□□□ 0.79
USHBP1-208ENST00000598309 HTTP42858 3142 aa19.96■□□□□ 0.79
USHBP1-208ENST00000598309 MPHOSPH10O00566 681 aaKnown RBP19.96■□□□□ 0.79
USHBP1-208ENST00000598309 B4GALNT3Q6L9W6 998 aa19.96■□□□□ 0.79
USHBP1-208ENST00000598309 GTF3C2Q8WUA4 911 aaPredicted RBP19.96■□□□□ 0.79
USHBP1-208ENST00000598309 SLC9C1Q4G0N8 1177 aa19.95■□□□□ 0.78
USHBP1-208ENST00000598309 ACER1Q8TDN7 264 aa19.95■□□□□ 0.78
USHBP1-208ENST00000598309 EPB41L4AQ9HCS5 686 aaPredicted RBP19.95■□□□□ 0.78
USHBP1-208ENST00000598309 MYPNQ86TC9 1320 aa19.95■□□□□ 0.78
USHBP1-208ENST00000598309 SMIM22K7EJ46 135 aa19.94■□□□□ 0.78
USHBP1-208ENST00000598309 AKR1B1P15121 316 aa19.94■□□□□ 0.78
USHBP1-208ENST00000598309 HERVK_113P62684 666 aa19.94■□□□□ 0.78
USHBP1-208ENST00000598309 NBPF11Q86T75 865 aa19.94■□□□□ 0.78
USHBP1-208ENST00000598309 ZNF333Q96JL9 665 aa19.94■□□□□ 0.78
USHBP1-208ENST00000598309 SEC62Q99442 399 aaKnown RBP19.94■□□□□ 0.78
USHBP1-208ENST00000598309 NACAP1Q9BZK3 213 aa19.94■□□□□ 0.78
USHBP1-208ENST00000598309 MORF4L1Q9UBU8 362 aa19.94■□□□□ 0.78
USHBP1-208ENST00000598309 PATL2C9JE40 543 aaKnown RBP19.93■□□□□ 0.78
USHBP1-208ENST00000598309 VCAM1P19320 739 aa19.93■□□□□ 0.78
USHBP1-208ENST00000598309 TDO2P48775 406 aa19.93■□□□□ 0.78
USHBP1-208ENST00000598309 OSBPL3Q9H4L5 887 aa19.93■□□□□ 0.78
USHBP1-208ENST00000598309 MYH8P13535 1937 aa19.92■□□□□ 0.78
USHBP1-208ENST00000598309 USP17L15C9J2P7 530 aa19.92■□□□□ 0.78
USHBP1-208ENST00000598309 USP17L13C9JLJ4 530 aa19.92■□□□□ 0.78
USHBP1-208ENST00000598309 USP17L11C9JVI0 530 aa19.92■□□□□ 0.78
USHBP1-208ENST00000598309 USP17L18D6R9N7 530 aa19.92■□□□□ 0.78
USHBP1-208ENST00000598309 USP17L22D6RA61 530 aa19.92■□□□□ 0.78
USHBP1-208ENST00000598309 USP17L17D6RBQ6 530 aa19.92■□□□□ 0.78
USHBP1-208ENST00000598309 USP17L19D6RCP7 530 aa19.92■□□□□ 0.78
USHBP1-208ENST00000598309 USP17L20D6RJB6 530 aa19.92■□□□□ 0.78
USHBP1-208ENST00000598309 TNPO2O14787 897 aaKnown RBP19.92■□□□□ 0.78
USHBP1-208ENST00000598309 ECM2O94769 699 aaPredicted RBP19.92■□□□□ 0.78
USHBP1-208ENST00000598309 APPP05067 770 aa19.92■□□□□ 0.78
USHBP1-208ENST00000598309 MLLT1Q03111 559 aaPredicted RBP19.92■□□□□ 0.78
USHBP1-208ENST00000598309 ICA1Q05084 483 aa19.92■□□□□ 0.78
USHBP1-208ENST00000598309 PRKCZQ05513 592 aa19.92■□□□□ 0.78
USHBP1-208ENST00000598309 USP17L24Q0WX57 530 aa19.92■□□□□ 0.78
USHBP1-208ENST00000598309 ZYXQ15942 572 aaKnown RBP19.92■□□□□ 0.78
USHBP1-208ENST00000598309 PLEKHM2Q8IWE5 1019 aa19.92■□□□□ 0.78
USHBP1-208ENST00000598309 RAET1EQ8TD07 263 aa19.92■□□□□ 0.78
USHBP1-208ENST00000598309 P2RX7Q99572 595 aaKnown RBP19.92■□□□□ 0.78
USHBP1-208ENST00000598309 SH2D4AQ9H788 454 aa19.92■□□□□ 0.78
USHBP1-208ENST00000598309 ARHGEF10LQ9HCE6 1279 aa19.92■□□□□ 0.78
USHBP1-208ENST00000598309 MGAMO43451 1857 aa19.91■□□□□ 0.78
USHBP1-208ENST00000598309 A0A1W2PRG0 241 aa19.91■□□□□ 0.78
USHBP1-208ENST00000598309 MINDY4BA8MYZ0 360 aa19.91■□□□□ 0.78
USHBP1-208ENST00000598309 IFNL3Q8IZI9 196 aa19.91■□□□□ 0.78
USHBP1-208ENST00000598309 ZNF287Q9HBT7 754 aa19.91■□□□□ 0.78
USHBP1-208ENST00000598309 HELLSQ9NRZ9 838 aa19.91■□□□□ 0.78
USHBP1-208ENST00000598309 CATSPERGQ6ZRH7 1159 aa19.9■□□□□ 0.78
USHBP1-208ENST00000598309 LPAR1Q92633 364 aa19.9■□□□□ 0.78
USHBP1-208ENST00000598309 COA7Q96BR5 231 aa19.9■□□□□ 0.78
USHBP1-208ENST00000598309 KANSL2Q9H9L4 492 aa19.9■□□□□ 0.78
USHBP1-208ENST00000598309 RASA1P20936 1047 aa19.89■□□□□ 0.77
USHBP1-208ENST00000598309 IRX6P78412 446 aaPredicted RBP19.89■□□□□ 0.77
USHBP1-208ENST00000598309 IRF5Q13568 498 aa19.89■□□□□ 0.77
USHBP1-208ENST00000598309 LBX2Q6XYB7 198 aa19.89■□□□□ 0.77
USHBP1-208ENST00000598309 SIAH1Q8IUQ4 282 aa19.89■□□□□ 0.77
USHBP1-208ENST00000598309 GPRC5AQ8NFJ5 357 aa19.89■□□□□ 0.77
USHBP1-208ENST00000598309 NAPBQ9H115 298 aa19.89■□□□□ 0.77
USHBP1-208ENST00000598309 RPAP3Q9H6T3 665 aaPredicted RBP19.89■□□□□ 0.77
USHBP1-208ENST00000598309 TXNRD2Q9NNW7 524 aa19.89■□□□□ 0.77
USHBP1-208ENST00000598309 TMX2Q9Y320 296 aa19.89■□□□□ 0.77
USHBP1-208ENST00000598309 RBBP6Q7Z6E9 1792 aaKnown RBP19.88■□□□□ 0.77
USHBP1-208ENST00000598309 TRIM6-TRIM34B2RNG4 842 aa19.88■□□□□ 0.77
USHBP1-208ENST00000598309 GRK4P32298 578 aa19.88■□□□□ 0.77
USHBP1-208ENST00000598309 FLT3LGP49771 235 aa19.88■□□□□ 0.77
USHBP1-208ENST00000598309 CLEC10AQ8IUN9 316 aa19.88■□□□□ 0.77
USHBP1-208ENST00000598309 SLAIN1Q8ND83 568 aa19.88■□□□□ 0.77
USHBP1-208ENST00000598309 SH3TC2Q8TF17 1288 aa19.88■□□□□ 0.77
USHBP1-208ENST00000598309 VCPKMTQ9H867 229 aa19.88■□□□□ 0.77
USHBP1-208ENST00000598309 MKNK2Q9HBH9 465 aa19.88■□□□□ 0.77
USHBP1-208ENST00000598309 RBPJLQ9UBG7 517 aa19.88■□□□□ 0.77
USHBP1-208ENST00000598309 GABRQQ9UN88 632 aa19.88■□□□□ 0.77
USHBP1-208ENST00000598309 RABGAP1Q9Y3P9 1069 aa19.88■□□□□ 0.77
USHBP1-208ENST00000598309 GREB1LQ9C091 1923 aaPredicted RBP19.87■□□□□ 0.77
USHBP1-208ENST00000598309 FOXP2O15409 715 aa19.87■□□□□ 0.77
USHBP1-208ENST00000598309 SLC3A2P08195 630 aaKnown RBP19.87■□□□□ 0.77
USHBP1-208ENST00000598309 ERVK-9P63128 1117 aa19.87■□□□□ 0.77
USHBP1-208ENST00000598309 ERVK-24P63145 666 aa19.87■□□□□ 0.77
USHBP1-208ENST00000598309 CCDC129Q6ZRS4 1044 aa19.87■□□□□ 0.77
USHBP1-208ENST00000598309 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.87■□□□□ 0.77
USHBP1-208ENST00000598309 TMEM106CQ9BVX2 250 aa19.87■□□□□ 0.77
USHBP1-208ENST00000598309 A0A0D9SFI3 127 aa19.86■□□□□ 0.77
USHBP1-208ENST00000598309 EEF2P13639 858 aaKnown RBP19.86■□□□□ 0.77
USHBP1-208ENST00000598309 PDE4BQ07343 736 aa19.86■□□□□ 0.77
USHBP1-208ENST00000598309 PPARAQ07869 468 aa19.86■□□□□ 0.77
USHBP1-208ENST00000598309 MCMDC2Q4G0Z9 681 aa19.86■□□□□ 0.77
USHBP1-208ENST00000598309 POTEEQ6S8J3 1075 aa19.86■□□□□ 0.77
USHBP1-208ENST00000598309 PXYLP1Q8TE99 480 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms