RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 ATAD5Q96QE3 1844 aa27.25■■□□□ 1.95
IRF3-220ENST00000598108 A0A1W2PRG0 241 aa27.25■■□□□ 1.95
IRF3-220ENST00000598108 LACTBP83111 547 aaPredicted RBP27.25■■□□□ 1.95
IRF3-220ENST00000598108 PKN2Q16513 984 aaKnown RBP27.25■■□□□ 1.95
IRF3-220ENST00000598108 CLEC10AQ8IUN9 316 aa27.25■■□□□ 1.95
IRF3-220ENST00000598108 CCDC17Q96LX7 622 aa27.25■■□□□ 1.95
IRF3-220ENST00000598108 KIAA1683Q9H0B3 1180 aa27.25■■□□□ 1.95
IRF3-220ENST00000598108 EFCC1Q9HA90 598 aa27.25■■□□□ 1.95
IRF3-220ENST00000598108 ECM2O94769 699 aaPredicted RBP27.24■■□□□ 1.95
IRF3-220ENST00000598108 GSPT1P15170 499 aaKnown RBP27.24■■□□□ 1.95
IRF3-220ENST00000598108 CTGFP29279 349 aa27.24■■□□□ 1.95
IRF3-220ENST00000598108 ZNF589Q86UQ0 364 aaPredicted RBP27.24■■□□□ 1.95
IRF3-220ENST00000598108 FEZ1Q99689 392 aa27.24■■□□□ 1.95
IRF3-220ENST00000598108 ASCC2Q9H1I8 757 aaPredicted RBP27.24■■□□□ 1.95
IRF3-220ENST00000598108 RASA1P20936 1047 aa27.23■■□□□ 1.95
IRF3-220ENST00000598108 HOXA7P31268 230 aaPredicted RBP27.23■■□□□ 1.95
IRF3-220ENST00000598108 TTC22Q5TAA0 569 aa27.23■■□□□ 1.95
IRF3-220ENST00000598108 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.23■■□□□ 1.95
IRF3-220ENST00000598108 NAPBQ9H115 298 aa27.23■■□□□ 1.95
IRF3-220ENST00000598108 PTPRFP10586 1907 aa27.23■■□□□ 1.95
IRF3-220ENST00000598108 OSBPP22059 807 aa27.22■■□□□ 1.95
IRF3-220ENST00000598108 PABPC4Q13310 644 aaKnown RBP eCLIP27.22■■□□□ 1.956e-12■■■■■ 51.2
IRF3-220ENST00000598108 FBXO46Q6PJ61 603 aaPredicted RBP27.22■■□□□ 1.95
IRF3-220ENST00000598108 SMCR8Q8TEV9 937 aaPredicted RBP27.22■■□□□ 1.95
IRF3-220ENST00000598108 C12orf42Q96LP6 360 aa27.22■■□□□ 1.95
IRF3-220ENST00000598108 PNMA3Q9UL41 463 aa27.22■■□□□ 1.95
IRF3-220ENST00000598108 ROBO3Q96MS0 1386 aa27.22■■□□□ 1.95
IRF3-220ENST00000598108 P2RX7Q99572 595 aaKnown RBP27.21■■□□□ 1.95
IRF3-220ENST00000598108 MKNK2Q9HBH9 465 aa27.21■■□□□ 1.95
IRF3-220ENST00000598108 HPS5Q9UPZ3 1129 aa27.21■■□□□ 1.95
IRF3-220ENST00000598108 PRDM1O75626 825 aa27.2■■□□□ 1.94
IRF3-220ENST00000598108 USP14P54578 494 aa27.2■■□□□ 1.94
IRF3-220ENST00000598108 PPARAQ07869 468 aa27.2■■□□□ 1.94
IRF3-220ENST00000598108 ANKRD13CQ8N6S4 541 aa27.2■■□□□ 1.94
IRF3-220ENST00000598108 PTPN22Q9Y2R2 807 aa27.2■■□□□ 1.94
IRF3-220ENST00000598108 CCDC85CA6NKD9 419 aa27.19■■□□□ 1.94
IRF3-220ENST00000598108 PSMC4P43686 418 aa27.19■■□□□ 1.94
IRF3-220ENST00000598108 KIF22Q14807 665 aa27.19■■□□□ 1.94
IRF3-220ENST00000598108 ALX1Q15699 326 aa27.19■■□□□ 1.94
IRF3-220ENST00000598108 KIAA1755Q5JYT7 1200 aa27.19■■□□□ 1.94
IRF3-220ENST00000598108 CWC27Q6UX04 472 aaKnown RBP27.19■■□□□ 1.94
IRF3-220ENST00000598108 TRIM47Q96LD4 638 aa27.19■■□□□ 1.94
IRF3-220ENST00000598108 HSPD1P10809 573 aaKnown RBP27.18■■□□□ 1.94
IRF3-220ENST00000598108 VCAM1P19320 739 aa27.18■■□□□ 1.94
IRF3-220ENST00000598108 IRX3P78415 501 aaPredicted RBP27.18■■□□□ 1.94
IRF3-220ENST00000598108 ICA1Q05084 483 aa27.18■■□□□ 1.94
IRF3-220ENST00000598108 POTEEQ6S8J3 1075 aa27.18■■□□□ 1.94
IRF3-220ENST00000598108 INCENPQ9NQS7 918 aa27.18■■□□□ 1.94
IRF3-220ENST00000598108 TACC3Q9Y6A5 838 aa27.18■■□□□ 1.94
IRF3-220ENST00000598108 CCDC171Q6TFL3 1326 aa27.17■■□□□ 1.94
IRF3-220ENST00000598108 LOC285556D6RIA3 1793 aa27.17■■□□□ 1.94
IRF3-220ENST00000598108 PEX10O60683 326 aa27.17■■□□□ 1.94
IRF3-220ENST00000598108 FGAP02671 866 aa27.17■■□□□ 1.94
IRF3-220ENST00000598108 EEF2P13639 858 aaKnown RBP27.17■■□□□ 1.94
IRF3-220ENST00000598108 ARHGEF6Q15052 776 aa27.17■■□□□ 1.94
IRF3-220ENST00000598108 SKAP1Q86WV1 359 aa27.17■■□□□ 1.94
IRF3-220ENST00000598108 KANSL2Q9H9L4 492 aa27.17■■□□□ 1.94
IRF3-220ENST00000598108 DIAPH3Q9NSV4 1193 aa27.17■■□□□ 1.94
IRF3-220ENST00000598108 HTTP42858 3142 aa27.16■■□□□ 1.94
IRF3-220ENST00000598108 GCLCP48506 637 aaPredicted RBP27.16■■□□□ 1.94
IRF3-220ENST00000598108 CTDSPL2Q05D32 466 aa27.16■■□□□ 1.94
IRF3-220ENST00000598108 ZNF444Q8N0Y2 327 aaPredicted RBP27.16■■□□□ 1.94
IRF3-220ENST00000598108 TMX2Q9Y320 296 aa27.16■■□□□ 1.94
IRF3-220ENST00000598108 USP17L15C9J2P7 530 aa27.15■■□□□ 1.94
IRF3-220ENST00000598108 USP17L13C9JLJ4 530 aa27.15■■□□□ 1.94
IRF3-220ENST00000598108 USP17L11C9JVI0 530 aa27.15■■□□□ 1.94
IRF3-220ENST00000598108 USP17L18D6R9N7 530 aa27.15■■□□□ 1.94
IRF3-220ENST00000598108 USP17L22D6RA61 530 aa27.15■■□□□ 1.94
IRF3-220ENST00000598108 USP17L17D6RBQ6 530 aa27.15■■□□□ 1.94
IRF3-220ENST00000598108 USP17L19D6RCP7 530 aa27.15■■□□□ 1.94
IRF3-220ENST00000598108 USP17L20D6RJB6 530 aa27.15■■□□□ 1.94
IRF3-220ENST00000598108 FMNL1O95466 1100 aaPredicted RBP27.15■■□□□ 1.94
IRF3-220ENST00000598108 HERVK_113P62684 666 aa27.15■■□□□ 1.94
IRF3-220ENST00000598108 USP17L24Q0WX57 530 aa27.15■■□□□ 1.94
IRF3-220ENST00000598108 CATSPERGQ6ZRH7 1159 aa27.15■■□□□ 1.94
IRF3-220ENST00000598108 CENPQQ7L2Z9 268 aaPredicted RBP27.15■■□□□ 1.94
IRF3-220ENST00000598108 ARHGEF10LQ9HCE6 1279 aa27.15■■□□□ 1.94
IRF3-220ENST00000598108 HIP1O00291 1037 aa27.14■■□□□ 1.94
IRF3-220ENST00000598108 ATP2B2Q01814 1243 aa27.14■■□□□ 1.94
IRF3-220ENST00000598108 FAM110CQ1W6H9 321 aa27.14■■□□□ 1.94
IRF3-220ENST00000598108 RPAP3Q9H6T3 665 aaPredicted RBP27.14■■□□□ 1.94
IRF3-220ENST00000598108 ZNF287Q9HBT7 754 aa27.14■■□□□ 1.94
IRF3-220ENST00000598108 TXNRD2Q9NNW7 524 aa27.14■■□□□ 1.94
IRF3-220ENST00000598108 RBPJLQ9UBG7 517 aa27.14■■□□□ 1.94
IRF3-220ENST00000598108 ANAPC4Q9UJX5 808 aa27.14■■□□□ 1.94
IRF3-220ENST00000598108 IGKV6D-41A0A0C4DH26 115 aa27.13■■□□□ 1.93
IRF3-220ENST00000598108 SLC3A2P08195 630 aaKnown RBP27.13■■□□□ 1.93
IRF3-220ENST00000598108 PDE4BQ07343 736 aa27.13■■□□□ 1.93
IRF3-220ENST00000598108 FAM47AQ5JRC9 791 aa27.13■■□□□ 1.93
IRF3-220ENST00000598108 IL25Q9H293 177 aa27.13■■□□□ 1.93
IRF3-220ENST00000598108 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.13■■□□□ 1.93
IRF3-220ENST00000598108 PTCH2Q9Y6C5 1203 aa27.13■■□□□ 1.93
IRF3-220ENST00000598108 GNRH1P01148 92 aa27.12■■□□□ 1.93
IRF3-220ENST00000598108 FCGRTP55899 365 aa27.12■■□□□ 1.93
IRF3-220ENST00000598108 SPICE1Q8N0Z3 855 aa27.12■■□□□ 1.93
IRF3-220ENST00000598108 VCPKMTQ9H867 229 aa27.12■■□□□ 1.93
IRF3-220ENST00000598108 MORF4L1Q9UBU8 362 aa27.12■■□□□ 1.93
IRF3-220ENST00000598108 MFAP1P55081 439 aaKnown RBP27.11■■□□□ 1.93
IRF3-220ENST00000598108 SRRDQ9UH36 339 aa27.11■■□□□ 1.93
IRF3-220ENST00000598108 TFAP4Q01664 338 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms